RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PNISRQ8TF01 805 aaKnown RBP18.1■□□□□ 0.49
PTCH1-215ENST00000547672 MYOM1P52179 1685 aa18.09■□□□□ 0.49
PTCH1-215ENST00000547672 RIMS1Q86UR5 1692 aaKnown RBP18.09■□□□□ 0.49
PTCH1-215ENST00000547672 INSRP06213 1382 aa18.09■□□□□ 0.49
PTCH1-215ENST00000547672 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
PTCH1-215ENST00000547672 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.49
PTCH1-215ENST00000547672 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.48
PTCH1-215ENST00000547672 LTKP29376 864 aa18.08■□□□□ 0.48
PTCH1-215ENST00000547672 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
PTCH1-215ENST00000547672 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
PTCH1-215ENST00000547672 DIP2AQ14689 1571 aa18.08■□□□□ 0.48
PTCH1-215ENST00000547672 NSD2O96028 1365 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
PTCH1-215ENST00000547672 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTCH1-215ENST00000547672 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
PTCH1-215ENST00000547672 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
PTCH1-215ENST00000547672 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
PTCH1-215ENST00000547672 METP08581 1390 aa18.06■□□□□ 0.48
PTCH1-215ENST00000547672 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
PTCH1-215ENST00000547672 TULP4Q9NRJ4 1543 aa18.05■□□□□ 0.48
PTCH1-215ENST00000547672 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
PTCH1-215ENST00000547672 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
PTCH1-215ENST00000547672 MED14O60244 1454 aa18.04■□□□□ 0.48
PTCH1-215ENST00000547672 ADAMTS13Q76LX8 1427 aa18.04■□□□□ 0.48
PTCH1-215ENST00000547672 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
PTCH1-215ENST00000547672 CARD14Q9BXL6 1004 aa18.03■□□□□ 0.48
PTCH1-215ENST00000547672 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
PTCH1-215ENST00000547672 CPS1P31327 1500 aa18.03■□□□□ 0.48
PTCH1-215ENST00000547672 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
PTCH1-215ENST00000547672 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
PTCH1-215ENST00000547672 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
PTCH1-215ENST00000547672 WAPLQ7Z5K2 1190 aa18.01■□□□□ 0.47
PTCH1-215ENST00000547672 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
PTCH1-215ENST00000547672 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
PTCH1-215ENST00000547672 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
PTCH1-215ENST00000547672 GTF3C3Q9Y5Q9 886 aa17.99■□□□□ 0.47
PTCH1-215ENST00000547672 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTCH1-215ENST00000547672 SLC26A8Q96RN1 970 aa17.98■□□□□ 0.47
PTCH1-215ENST00000547672 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
PTCH1-215ENST00000547672 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
PTCH1-215ENST00000547672 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
PTCH1-215ENST00000547672 ATP7BP35670 1465 aa17.96■□□□□ 0.47
PTCH1-215ENST00000547672 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
PTCH1-215ENST00000547672 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
PTCH1-215ENST00000547672 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
PTCH1-215ENST00000547672 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
PTCH1-215ENST00000547672 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
PTCH1-215ENST00000547672 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
PTCH1-215ENST00000547672 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
PTCH1-215ENST00000547672 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
PTCH1-215ENST00000547672 ROBO2Q9HCK4 1378 aa17.92■□□□□ 0.46
PTCH1-215ENST00000547672 NEFLP07196 543 aa17.92■□□□□ 0.46
PTCH1-215ENST00000547672 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
PTCH1-215ENST00000547672 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
PTCH1-215ENST00000547672 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
PTCH1-215ENST00000547672 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
PTCH1-215ENST00000547672 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
PTCH1-215ENST00000547672 PLEKHG3A1L390 1219 aa17.87■□□□□ 0.45
PTCH1-215ENST00000547672 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
PTCH1-215ENST00000547672 FYB1O15117 783 aa17.86■□□□□ 0.45
PTCH1-215ENST00000547672 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-215ENST00000547672 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-215ENST00000547672 CPSF1Q10570 1443 aaKnown RBP17.86■□□□□ 0.45
PTCH1-215ENST00000547672 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
PTCH1-215ENST00000547672 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PTCH1-215ENST00000547672 CD163L1Q9NR16 1453 aa17.84■□□□□ 0.45
PTCH1-215ENST00000547672 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-215ENST00000547672 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
PTCH1-215ENST00000547672 XRN1Q8IZH2 1706 aaKnown RBP17.84■□□□□ 0.45
PTCH1-215ENST00000547672 KCNA6P17658 529 aa17.82■□□□□ 0.44
PTCH1-215ENST00000547672 MTHFSP49914 203 aa17.82■□□□□ 0.44
PTCH1-215ENST00000547672 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
PTCH1-215ENST00000547672 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
PTCH1-215ENST00000547672 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
PTCH1-215ENST00000547672 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
PTCH1-215ENST00000547672 ANKRD26Q9UPS8 1709 aa17.81■□□□□ 0.44
PTCH1-215ENST00000547672 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
PTCH1-215ENST00000547672 CHD2O14647 1828 aaKnown RBP17.81■□□□□ 0.44
PTCH1-215ENST00000547672 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
PTCH1-215ENST00000547672 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
PTCH1-215ENST00000547672 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
PTCH1-215ENST00000547672 TNNT2P45379 298 aaPredicted RBP17.79■□□□□ 0.44
PTCH1-215ENST00000547672 COG3Q96JB2 828 aa17.79■□□□□ 0.44
PTCH1-215ENST00000547672 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
PTCH1-215ENST00000547672 KIF20BQ96Q89 1820 aa17.78■□□□□ 0.44
PTCH1-215ENST00000547672 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
PTCH1-215ENST00000547672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTCH1-215ENST00000547672 ACEP12821 1306 aa17.76■□□□□ 0.43
PTCH1-215ENST00000547672 AKAP12Q02952 1782 aa17.76■□□□□ 0.43
PTCH1-215ENST00000547672 PRR36Q9H6K5 1346 aa17.75■□□□□ 0.43
PTCH1-215ENST00000547672 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
PTCH1-215ENST00000547672 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
PTCH1-215ENST00000547672 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
PTCH1-215ENST00000547672 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
PTCH1-215ENST00000547672 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
PTCH1-215ENST00000547672 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms