RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 ABCC11Q96J66 1382 aa22.98■■□□□ 1.27
TMTC3-202ENST00000547034 PRAM1Q96QH2 718 aa22.98■■□□□ 1.27
TMTC3-202ENST00000547034 NSD2O96028 1365 aa22.97■■□□□ 1.27
TMTC3-202ENST00000547034 C3P01024 1663 aa22.97■■□□□ 1.27
TMTC3-202ENST00000547034 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
TMTC3-202ENST00000547034 FER1L4A9Z1Z3 1794 aa22.95■■□□□ 1.27
TMTC3-202ENST00000547034 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
TMTC3-202ENST00000547034 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
TMTC3-202ENST00000547034 HDGFP51858 240 aaKnown RBP22.94■■□□□ 1.26
TMTC3-202ENST00000547034 BCANQ96GW7 911 aa22.94■■□□□ 1.26
TMTC3-202ENST00000547034 ADAMTS8Q9UP79 889 aa22.94■■□□□ 1.26
TMTC3-202ENST00000547034 TECPR2O15040 1411 aa22.94■■□□□ 1.26
TMTC3-202ENST00000547034 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
TMTC3-202ENST00000547034 CGNL1Q0VF96 1302 aa22.93■■□□□ 1.26
TMTC3-202ENST00000547034 POGKQ9P215 609 aa22.93■■□□□ 1.26
TMTC3-202ENST00000547034 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
TMTC3-202ENST00000547034 CPS1P31327 1500 aa22.91■■□□□ 1.26
TMTC3-202ENST00000547034 CD163L1Q9NR16 1453 aa22.91■■□□□ 1.26
TMTC3-202ENST00000547034 SAFB2Q14151 953 aaKnown RBP eCLIP22.91■■□□□ 1.26
TMTC3-202ENST00000547034 ANKRD26Q9UPS8 1709 aa22.9■■□□□ 1.26
TMTC3-202ENST00000547034 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
TMTC3-202ENST00000547034 MINK1Q8N4C8 1332 aaPredicted RBP22.9■■□□□ 1.26
TMTC3-202ENST00000547034 FAM135BQ49AJ0 1406 aa22.9■■□□□ 1.26
TMTC3-202ENST00000547034 SIRT1Q96EB6 747 aa22.89■■□□□ 1.26
TMTC3-202ENST00000547034 METP08581 1390 aa22.89■■□□□ 1.26
TMTC3-202ENST00000547034 SHPRHQ149N8 1683 aa22.89■■□□□ 1.26
TMTC3-202ENST00000547034 MED14O60244 1454 aa22.88■■□□□ 1.25
TMTC3-202ENST00000547034 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
TMTC3-202ENST00000547034 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
TMTC3-202ENST00000547034 SLIT1O75093 1534 aa22.87■■□□□ 1.25
TMTC3-202ENST00000547034 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
TMTC3-202ENST00000547034 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
TMTC3-202ENST00000547034 PLEKHG1Q9ULL1 1385 aa22.86■■□□□ 1.25
TMTC3-202ENST00000547034 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
TMTC3-202ENST00000547034 ADAMTS13Q76LX8 1427 aa22.86■■□□□ 1.25
TMTC3-202ENST00000547034 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
TMTC3-202ENST00000547034 IRX6P78412 446 aaPredicted RBP22.85■■□□□ 1.25
TMTC3-202ENST00000547034 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
TMTC3-202ENST00000547034 ATP7BP35670 1465 aa22.83■■□□□ 1.25
TMTC3-202ENST00000547034 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
TMTC3-202ENST00000547034 ZNF521Q96K83 1311 aa22.83■■□□□ 1.25
TMTC3-202ENST00000547034 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
TMTC3-202ENST00000547034 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
TMTC3-202ENST00000547034 WAPLQ7Z5K2 1190 aa22.8■■□□□ 1.24
TMTC3-202ENST00000547034 KIF20BQ96Q89 1820 aa22.8■■□□□ 1.24
TMTC3-202ENST00000547034 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
TMTC3-202ENST00000547034 ADGRB2O60241 1585 aa22.79■■□□□ 1.24
TMTC3-202ENST00000547034 NGEFQ8N5V2 710 aa22.79■■□□□ 1.24
TMTC3-202ENST00000547034 SALL2Q9Y467 1007 aaPredicted RBP22.78■■□□□ 1.24
TMTC3-202ENST00000547034 CDCA7LQ96GN5 454 aa22.78■■□□□ 1.24
TMTC3-202ENST00000547034 LTKP29376 864 aa22.76■■□□□ 1.23
TMTC3-202ENST00000547034 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
TMTC3-202ENST00000547034 DIP2AQ14689 1571 aa22.75■■□□□ 1.23
TMTC3-202ENST00000547034 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
TMTC3-202ENST00000547034 RCAN3Q9UKA8 241 aa22.75■■□□□ 1.23
TMTC3-202ENST00000547034 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
TMTC3-202ENST00000547034 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
TMTC3-202ENST00000547034 FYB1O15117 783 aa22.73■■□□□ 1.23
TMTC3-202ENST00000547034 MTHFSP49914 203 aa22.73■■□□□ 1.23
TMTC3-202ENST00000547034 TXNDC2Q86VQ3 553 aa22.73■■□□□ 1.23
TMTC3-202ENST00000547034 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
TMTC3-202ENST00000547034 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
TMTC3-202ENST00000547034 IQSEC2Q5JU85 1478 aa22.72■■□□□ 1.23
TMTC3-202ENST00000547034 MON2Q7Z3U7 1717 aa22.72■■□□□ 1.23
TMTC3-202ENST00000547034 COL3A1P02461 1466 aaPredicted RBP22.71■■□□□ 1.23
TMTC3-202ENST00000547034 CFAP53Q96M91 514 aa22.71■■□□□ 1.23
TMTC3-202ENST00000547034 RRP1P56182 461 aaKnown RBP22.71■■□□□ 1.23
TMTC3-202ENST00000547034 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.71■■□□□ 1.23
TMTC3-202ENST00000547034 AKAP12Q02952 1782 aa22.7■■□□□ 1.22
TMTC3-202ENST00000547034 TNNT2P45379 298 aaPredicted RBP22.7■■□□□ 1.22
TMTC3-202ENST00000547034 EID1Q9Y6B2 187 aa22.7■■□□□ 1.22
TMTC3-202ENST00000547034 CCDC146Q8IYE0 955 aa22.69■■□□□ 1.22
TMTC3-202ENST00000547034 CEP170BQ9Y4F5 1589 aaPredicted RBP22.69■■□□□ 1.22
TMTC3-202ENST00000547034 RIMS1Q86UR5 1692 aaKnown RBP22.69■■□□□ 1.22
TMTC3-202ENST00000547034 TOPAZ1Q8N9V7 1692 aa22.69■■□□□ 1.22
TMTC3-202ENST00000547034 GOLGA2Q08379 1002 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 PPIP5K1Q6PFW1 1433 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 EDC4Q6P2E9 1401 aaKnown RBP22.68■■□□□ 1.22
TMTC3-202ENST00000547034 APAF1O14727 1248 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 DUSP27Q5VZP5 1158 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
TMTC3-202ENST00000547034 THEMISQ8N1K5 641 aaPredicted RBP22.68■■□□□ 1.22
TMTC3-202ENST00000547034 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
TMTC3-202ENST00000547034 GGNBP2Q9H3C7 697 aa22.67■■□□□ 1.22
TMTC3-202ENST00000547034 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
TMTC3-202ENST00000547034 PTCH1Q13635 1447 aa22.67■■□□□ 1.22
TMTC3-202ENST00000547034 ZNF142P52746 1687 aaPredicted RBP22.66■■□□□ 1.22
TMTC3-202ENST00000547034 ITSN1Q15811 1721 aa22.66■■□□□ 1.22
TMTC3-202ENST00000547034 SLFN5Q08AF3 891 aa22.66■■□□□ 1.22
TMTC3-202ENST00000547034 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
TMTC3-202ENST00000547034 TSHZ2Q9NRE2 1034 aa22.66■■□□□ 1.22
TMTC3-202ENST00000547034 XRN1Q8IZH2 1706 aaKnown RBP22.65■■□□□ 1.22
TMTC3-202ENST00000547034 RUNDC1Q96C34 613 aa22.64■■□□□ 1.22
TMTC3-202ENST00000547034 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
TMTC3-202ENST00000547034 NUDT16Q96DE0 195 aaKnown RBP22.64■■□□□ 1.21
TMTC3-202ENST00000547034 CCDC61Q9Y6R9 512 aa22.64■■□□□ 1.21
TMTC3-202ENST00000547034 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
TMTC3-202ENST00000547034 PRR36Q9H6K5 1346 aa22.6■■□□□ 1.21
TMTC3-202ENST00000547034 NRKQ7Z2Y5 1582 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms