RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
SVOP-201ENST00000546618 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
SVOP-201ENST00000546618 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
SVOP-201ENST00000546618 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
SVOP-201ENST00000546618 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
SVOP-201ENST00000546618 HSPA1LP34931 641 aa23.47■■□□□ 1.35
SVOP-201ENST00000546618 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
SVOP-201ENST00000546618 TMF1P82094 1093 aa23.46■■□□□ 1.35
SVOP-201ENST00000546618 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
SVOP-201ENST00000546618 ARHGEF28Q8N1W1 1705 aaKnown RBP23.46■■□□□ 1.35
SVOP-201ENST00000546618 PLEKHH1Q9ULM0 1364 aa23.46■■□□□ 1.35
SVOP-201ENST00000546618 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
SVOP-201ENST00000546618 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
SVOP-201ENST00000546618 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
SVOP-201ENST00000546618 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
SVOP-201ENST00000546618 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
SVOP-201ENST00000546618 NCOA3Q9Y6Q9 1424 aa23.4■■□□□ 1.34
SVOP-201ENST00000546618 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
SVOP-201ENST00000546618 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
SVOP-201ENST00000546618 QRICH2Q9H0J4 1663 aa23.38■■□□□ 1.33
SVOP-201ENST00000546618 STRCP1A6NGW2 1772 aa23.37■■□□□ 1.33
SVOP-201ENST00000546618 MED1Q15648 1581 aaPredicted RBP23.36■■□□□ 1.33
SVOP-201ENST00000546618 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
SVOP-201ENST00000546618 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
SVOP-201ENST00000546618 RBM33Q96EV2 1170 aaKnown RBP23.35■■□□□ 1.33
SVOP-201ENST00000546618 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
SVOP-201ENST00000546618 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
SVOP-201ENST00000546618 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.33
SVOP-201ENST00000546618 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
SVOP-201ENST00000546618 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
SVOP-201ENST00000546618 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
SVOP-201ENST00000546618 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.32
SVOP-201ENST00000546618 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
SVOP-201ENST00000546618 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
SVOP-201ENST00000546618 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
SVOP-201ENST00000546618 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
SVOP-201ENST00000546618 ADGRB2O60241 1585 aa23.3■■□□□ 1.32
SVOP-201ENST00000546618 POLR3GLQ9BT43 218 aa23.28■■□□□ 1.32
SVOP-201ENST00000546618 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.31
SVOP-201ENST00000546618 MSH6P52701 1360 aa23.26■■□□□ 1.31
SVOP-201ENST00000546618 ATF3P18847 181 aa23.25■■□□□ 1.31
SVOP-201ENST00000546618 DCCP43146 1447 aa23.25■■□□□ 1.31
SVOP-201ENST00000546618 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
SVOP-201ENST00000546618 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
SVOP-201ENST00000546618 CCDC61Q9Y6R9 512 aa23.24■■□□□ 1.31
SVOP-201ENST00000546618 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
SVOP-201ENST00000546618 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
SVOP-201ENST00000546618 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
SVOP-201ENST00000546618 NINLQ9Y2I6 1382 aa23.21■■□□□ 1.31
SVOP-201ENST00000546618 ANKARQ7Z5J8 1434 aa23.21■■□□□ 1.31
SVOP-201ENST00000546618 PRR36Q9H6K5 1346 aa23.19■■□□□ 1.3
SVOP-201ENST00000546618 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
SVOP-201ENST00000546618 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
SVOP-201ENST00000546618 NUTM2FA1L443 756 aa23.18■■□□□ 1.3
SVOP-201ENST00000546618 XIRP1Q702N8 1843 aaKnown RBP23.17■■□□□ 1.3
SVOP-201ENST00000546618 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
SVOP-201ENST00000546618 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
SVOP-201ENST00000546618 ATP7BP35670 1465 aa23.17■■□□□ 1.3
SVOP-201ENST00000546618 PLEKHG3A1L390 1219 aa23.15■■□□□ 1.3
SVOP-201ENST00000546618 FMN2Q9NZ56 1722 aa23.14■■□□□ 1.3
SVOP-201ENST00000546618 TERF2IPQ9NYB0 399 aa23.14■■□□□ 1.29
SVOP-201ENST00000546618 PPIP5K1Q6PFW1 1433 aa23.14■■□□□ 1.29
SVOP-201ENST00000546618 PANK3Q9H999 370 aa23.13■■□□□ 1.29
SVOP-201ENST00000546618 MST1RQ04912 1400 aa23.12■■□□□ 1.29
SVOP-201ENST00000546618 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
SVOP-201ENST00000546618 ESCO1Q5FWF5 840 aa23.11■■□□□ 1.29
SVOP-201ENST00000546618 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
SVOP-201ENST00000546618 SLAIN2Q9P270 581 aa23.11■■□□□ 1.29
SVOP-201ENST00000546618 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
SVOP-201ENST00000546618 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
SVOP-201ENST00000546618 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
SVOP-201ENST00000546618 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
SVOP-201ENST00000546618 NGDNQ8NEJ9 315 aaKnown RBP23.07■■□□□ 1.28
SVOP-201ENST00000546618 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
SVOP-201ENST00000546618 ORAI2Q96SN7 254 aa23.07■■□□□ 1.28
SVOP-201ENST00000546618 ACEP12821 1306 aa23.07■■□□□ 1.28
SVOP-201ENST00000546618 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
SVOP-201ENST00000546618 POLR3AO14802 1390 aaPredicted RBP23.05■■□□□ 1.28
SVOP-201ENST00000546618 PER1O15534 1290 aaPredicted RBP23.05■■□□□ 1.28
SVOP-201ENST00000546618 MYOM1P52179 1685 aa23.05■■□□□ 1.28
SVOP-201ENST00000546618 A0A1W2PP64 1363 aa23.04■■□□□ 1.28
SVOP-201ENST00000546618 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
SVOP-201ENST00000546618 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
SVOP-201ENST00000546618 CD163L1Q9NR16 1453 aa23.04■■□□□ 1.28
SVOP-201ENST00000546618 ITSN1Q15811 1721 aa23.03■■□□□ 1.28
SVOP-201ENST00000546618 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
SVOP-201ENST00000546618 ROBO1Q9Y6N7 1651 aa23.02■■□□□ 1.28
SVOP-201ENST00000546618 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
SVOP-201ENST00000546618 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
SVOP-201ENST00000546618 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
SVOP-201ENST00000546618 RGS17Q9UGC6 210 aaPredicted RBP23■■□□□ 1.27
SVOP-201ENST00000546618 FOXO3O43524 673 aa22.99■■□□□ 1.27
SVOP-201ENST00000546618 PSME1Q06323 249 aa22.99■■□□□ 1.27
SVOP-201ENST00000546618 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
SVOP-201ENST00000546618 RGPD8O14715 1765 aaPredicted RBP22.98■■□□□ 1.27
SVOP-201ENST00000546618 NPHP3Q7Z494 1330 aa22.97■■□□□ 1.27
SVOP-201ENST00000546618 USP6P35125 1406 aa22.97■■□□□ 1.27
SVOP-201ENST00000546618 EDC4Q6P2E9 1401 aaKnown RBP22.97■■□□□ 1.27
SVOP-201ENST00000546618 NSD3Q9BZ95 1437 aa22.97■■□□□ 1.27
SVOP-201ENST00000546618 CGNL1Q0VF96 1302 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms