RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 PPLO60437 1756 aa32.12■■■□□ 2.73
SLC38A1-203ENST00000546519 ADGRL3Q9HAR2 1447 aa32.12■■■□□ 2.73
SLC38A1-203ENST00000546519 NEXMIFQ5QGS0 1516 aa32.11■■■□□ 2.73
SLC38A1-203ENST00000546519 C8orf37Q96NL8 207 aa32.11■■■□□ 2.73
SLC38A1-203ENST00000546519 PNPLA6Q8IY17 1366 aa32.1■■■□□ 2.73
SLC38A1-203ENST00000546519 LRRC59Q96AG4 307 aaKnown RBP32.1■■■□□ 2.73
SLC38A1-203ENST00000546519 MYOM2P54296 1465 aa32.1■■■□□ 2.73
SLC38A1-203ENST00000546519 RGS12O14924 1447 aa32.09■■■□□ 2.73
SLC38A1-203ENST00000546519 DCAF11Q8TEB1 546 aa32.07■■■□□ 2.72
SLC38A1-203ENST00000546519 QTRT2Q9H974 415 aaKnown RBP32.04■■■□□ 2.72
SLC38A1-203ENST00000546519 C1orf167Q5SNV9 1468 aa32.01■■■□□ 2.71
SLC38A1-203ENST00000546519 NRXN1Q9ULB1 1477 aa32.01■■■□□ 2.71
SLC38A1-203ENST00000546519 ADAMTS2O95450 1211 aa32■■■□□ 2.71
SLC38A1-203ENST00000546519 RBM6P78332 1123 aaKnown RBP32■■■□□ 2.71
SLC38A1-203ENST00000546519 PRAG1Q86YV5 1406 aa31.99■■■□□ 2.71
SLC38A1-203ENST00000546519 VGFO15240 615 aaPredicted RBP31.98■■■□□ 2.71
SLC38A1-203ENST00000546519 KDM2AQ9Y2K7 1162 aa31.97■■■□□ 2.71
SLC38A1-203ENST00000546519 LAMC1P11047 1609 aa31.97■■■□□ 2.71
SLC38A1-203ENST00000546519 NGLY1Q96IV0 654 aa31.95■■■□□ 2.71
SLC38A1-203ENST00000546519 ORAI2Q96SN7 254 aa31.95■■■□□ 2.71
SLC38A1-203ENST00000546519 ROBO2Q9HCK4 1378 aa31.94■■■□□ 2.7
SLC38A1-203ENST00000546519 PTCH1Q13635 1447 aa31.92■■■□□ 2.7
SLC38A1-203ENST00000546519 KIAA1210Q9ULL0 1709 aa31.91■■■□□ 2.7
SLC38A1-203ENST00000546519 PIK3C2GO75747 1445 aa31.91■■■□□ 2.7
SLC38A1-203ENST00000546519 ADGRF5Q8IZF2 1346 aa31.9■■■□□ 2.7
SLC38A1-203ENST00000546519 NBPF8Q3BBV2 869 aa31.89■■■□□ 2.7
SLC38A1-203ENST00000546519 SOS2Q07890 1332 aaPredicted RBP31.88■■■□□ 2.69
SLC38A1-203ENST00000546519 TRPM1Q7Z4N2 1603 aa31.88■■■□□ 2.69
SLC38A1-203ENST00000546519 RALGAPBQ86X10 1494 aa31.87■■■□□ 2.69
SLC38A1-203ENST00000546519 USP21Q9UK80 565 aa31.85■■■□□ 2.69
SLC38A1-203ENST00000546519 COL22A1Q8NFW1 1626 aaPredicted RBP31.82■■■□□ 2.69
SLC38A1-203ENST00000546519 ATAD2Q6PL18 1390 aa31.8■■■□□ 2.68
SLC38A1-203ENST00000546519 C14orf93Q9H972 538 aaKnown RBP31.78■■■□□ 2.68
SLC38A1-203ENST00000546519 TRPC5Q9UL62 973 aaPredicted RBP31.78■■■□□ 2.68
SLC38A1-203ENST00000546519 GPRASP1Q5JY77 1395 aa31.78■■■□□ 2.68
SLC38A1-203ENST00000546519 ATRNO75882 1429 aa31.76■■■□□ 2.68
SLC38A1-203ENST00000546519 FNBP4Q8N3X1 1017 aaPredicted RBP31.76■■■□□ 2.67
SLC38A1-203ENST00000546519 MARF1Q9Y4F3 1742 aaKnown RBP31.75■■■□□ 2.67
SLC38A1-203ENST00000546519 CDC42BPGQ6DT37 1551 aa31.73■■■□□ 2.67
SLC38A1-203ENST00000546519 PXDNQ92626 1479 aa31.72■■■□□ 2.67
SLC38A1-203ENST00000546519 ROCK2O75116 1388 aaKnown RBP31.72■■■□□ 2.67
SLC38A1-203ENST00000546519 XPCQ01831 940 aaPredicted RBP31.72■■■□□ 2.67
SLC38A1-203ENST00000546519 ESCO1Q5FWF5 840 aa31.72■■■□□ 2.67
SLC38A1-203ENST00000546519 CFAP70Q5T0N1 1121 aa31.71■■■□□ 2.67
SLC38A1-203ENST00000546519 ADGRB1O14514 1584 aa31.7■■■□□ 2.67
SLC38A1-203ENST00000546519 BCL9LQ86UU0 1499 aa31.68■■■□□ 2.66
SLC38A1-203ENST00000546519 NPHP3Q7Z494 1330 aa31.67■■■□□ 2.66
SLC38A1-203ENST00000546519 NUTM2FA1L443 756 aa31.66■■■□□ 2.66
SLC38A1-203ENST00000546519 FOXO3O43524 673 aa31.66■■■□□ 2.66
SLC38A1-203ENST00000546519 NBPF1Q3BBV0 1214 aa31.66■■■□□ 2.66
SLC38A1-203ENST00000546519 CARD11Q9BXL7 1154 aa31.63■■■□□ 2.65
SLC38A1-203ENST00000546519 SRCAPQ6ZRS2 3230 aa31.62■■■□□ 2.65
SLC38A1-203ENST00000546519 WAPLQ7Z5K2 1190 aa31.62■■■□□ 2.65
SLC38A1-203ENST00000546519 STK26Q9P289 416 aa31.62■■■□□ 2.65
SLC38A1-203ENST00000546519 EP400Q96L91 3159 aa31.6■■■□□ 2.65
SLC38A1-203ENST00000546519 ZRANB1Q9UGI0 708 aa31.58■■■□□ 2.65
SLC38A1-203ENST00000546519 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.58■■■□□ 2.65
SLC38A1-203ENST00000546519 PLEKHH1Q9ULM0 1364 aa31.57■■■□□ 2.64
SLC38A1-203ENST00000546519 GJD4Q96KN9 370 aaPredicted RBP31.57■■■□□ 2.64
SLC38A1-203ENST00000546519 FMN2Q9NZ56 1722 aa31.56■■■□□ 2.64
SLC38A1-203ENST00000546519 GLI3P10071 1580 aa31.56■■■□□ 2.64
SLC38A1-203ENST00000546519 YTHDC2Q9H6S0 1430 aaKnown RBP31.55■■■□□ 2.64
SLC38A1-203ENST00000546519 KNDC1Q76NI1 1749 aa31.55■■■□□ 2.64
SLC38A1-203ENST00000546519 USP47Q96K76 1375 aa31.55■■■□□ 2.64
SLC38A1-203ENST00000546519 TECPR2O15040 1411 aa31.54■■■□□ 2.64
SLC38A1-203ENST00000546519 LRPPRCP42704 1394 aaKnown RBP31.54■■■□□ 2.64
SLC38A1-203ENST00000546519 EIF4G2P78344 907 aaKnown RBP eCLIP31.53■■■□□ 2.64
SLC38A1-203ENST00000546519 TMEM132EQ6IEE7 984 aa31.53■■■□□ 2.64
SLC38A1-203ENST00000546519 EIF3AQ14152 1382 aaKnown RBP31.52■■■□□ 2.64
SLC38A1-203ENST00000546519 BRWD3Q6RI45 1802 aa31.52■■■□□ 2.64
SLC38A1-203ENST00000546519 DLC1Q96QB1 1528 aa31.51■■■□□ 2.63
SLC38A1-203ENST00000546519 ABCC11Q96J66 1382 aa31.5■■■□□ 2.63
SLC38A1-203ENST00000546519 SLIT2O94813 1529 aa31.49■■■□□ 2.63
SLC38A1-203ENST00000546519 RGPD8O14715 1765 aaPredicted RBP31.49■■■□□ 2.63
SLC38A1-203ENST00000546519 KIF1AQ12756 1690 aa31.49■■■□□ 2.63
SLC38A1-203ENST00000546519 USP32Q8NFA0 1604 aa31.49■■■□□ 2.63
SLC38A1-203ENST00000546519 CCDC125Q86Z20 511 aa31.48■■■□□ 2.63
SLC38A1-203ENST00000546519 ARHGEF28Q8N1W1 1705 aaKnown RBP31.48■■■□□ 2.63
SLC38A1-203ENST00000546519 SPATA31A3Q5VYP0 1347 aa31.48■■■□□ 2.63
SLC38A1-203ENST00000546519 UNC5CLQ8IV45 518 aa31.47■■■□□ 2.63
SLC38A1-203ENST00000546519 PLEKHG5O94827 1062 aa31.44■■■□□ 2.62
SLC38A1-203ENST00000546519 HSPA5P11021 654 aaKnown RBP31.44■■■□□ 2.62
SLC38A1-203ENST00000546519 SIRT1Q96EB6 747 aa31.44■■■□□ 2.62
SLC38A1-203ENST00000546519 KRT28Q7Z3Y7 464 aa31.43■■■□□ 2.62
SLC38A1-203ENST00000546519 TRAK1Q9UPV9 953 aa31.42■■■□□ 2.62
SLC38A1-203ENST00000546519 PLCH1Q4KWH8 1693 aa31.41■■■□□ 2.62
SLC38A1-203ENST00000546519 BLMP54132 1417 aaPredicted RBP31.41■■■□□ 2.62
SLC38A1-203ENST00000546519 DEFB132Q7Z7B7 95 aa31.4■■■□□ 2.62
SLC38A1-203ENST00000546519 CABLES1Q8TDN4 633 aa31.4■■■□□ 2.62
SLC38A1-203ENST00000546519 ABCA3Q99758 1704 aa31.39■■■□□ 2.62
SLC38A1-203ENST00000546519 ST20-MTHFSA0A0A6YYL1 179 aa31.37■■■□□ 2.61
SLC38A1-203ENST00000546519 CENPJQ9HC77 1338 aaPredicted RBP31.37■■■□□ 2.61
SLC38A1-203ENST00000546519 SBNO2Q9Y2G9 1366 aa31.37■■■□□ 2.61
SLC38A1-203ENST00000546519 TNS3Q68CZ2 1445 aa31.36■■■□□ 2.61
SLC38A1-203ENST00000546519 HAP1P54257 671 aaPredicted RBP31.35■■■□□ 2.61
SLC38A1-203ENST00000546519 SEPT12Q8IYM1 358 aa31.35■■■□□ 2.61
SLC38A1-203ENST00000546519 QRICH2Q9H0J4 1663 aa31.35■■■□□ 2.61
SLC38A1-203ENST00000546519 PHF8Q9UPP1 1060 aa31.34■■■□□ 2.61
SLC38A1-203ENST00000546519 NWD2Q9ULI1 1742 aa31.33■■■□□ 2.61
SLC38A1-203ENST00000546519 SLC24A1O60721 1099 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms