RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 PREX1Q8TCU6 1659 aa7.64□□□□□ -1.19
NPIPB3-214ENST00000545358 CCDC7Q96M83 1385 aa7.64□□□□□ -1.19
NPIPB3-214ENST00000545358 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
NPIPB3-214ENST00000545358 VGFO15240 615 aaPredicted RBP7.64□□□□□ -1.19
NPIPB3-214ENST00000545358 PPLO60437 1756 aa7.64□□□□□ -1.19
NPIPB3-214ENST00000545358 NRXN1Q9ULB1 1477 aa7.63□□□□□ -1.19
NPIPB3-214ENST00000545358 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
NPIPB3-214ENST00000545358 WASHC2CQ9Y4E1 1318 aa7.63□□□□□ -1.19
NPIPB3-214ENST00000545358 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
NPIPB3-214ENST00000545358 CARD11Q9BXL7 1154 aa7.63□□□□□ -1.19
NPIPB3-214ENST00000545358 COL17A1Q9UMD9 1497 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 SEC24BO95487 1268 aa7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 GGT6Q6P531 493 aa7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 ERVK-7P63135 1459 aa7.62□□□□□ -1.19
NPIPB3-214ENST00000545358 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 MKRN3Q13064 507 aaKnown RBP7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 KDM2AQ9Y2K7 1162 aa7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 SETBP1Q9Y6X0 1596 aa7.61□□□□□ -1.19
NPIPB3-214ENST00000545358 KIF7Q2M1P5 1343 aa7.6□□□□□ -1.19
NPIPB3-214ENST00000545358 RNF25Q96BH1 459 aaPredicted RBP7.6□□□□□ -1.19
NPIPB3-214ENST00000545358 SCAF11Q99590 1463 aaKnown RBP7.6□□□□□ -1.19
NPIPB3-214ENST00000545358 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
NPIPB3-214ENST00000545358 RPGRIP1LQ68CZ1 1315 aa7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 NEXMIFQ5QGS0 1516 aa7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 ANP32CO43423 234 aa7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 CENPBP07199 599 aaPredicted RBP7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 MAMSTRQ6ZN01 415 aa7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 PIK3C2GO75747 1445 aa7.59□□□□□ -1.19
NPIPB3-214ENST00000545358 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
NPIPB3-214ENST00000545358 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
NPIPB3-214ENST00000545358 PLCG2P16885 1265 aa7.58□□□□□ -1.2
NPIPB3-214ENST00000545358 TMEM131LA2VDJ0 1609 aa7.58□□□□□ -1.2
NPIPB3-214ENST00000545358 OCEL1Q9H607 264 aa7.57□□□□□ -1.2
NPIPB3-214ENST00000545358 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
NPIPB3-214ENST00000545358 ZFYVE9O95405 1425 aa7.57□□□□□ -1.2
NPIPB3-214ENST00000545358 KDM5AP29375 1690 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-214ENST00000545358 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
NPIPB3-214ENST00000545358 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
NPIPB3-214ENST00000545358 C11orf95C9JLR9 678 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-214ENST00000545358 IRX5P78411 483 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-214ENST00000545358 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
NPIPB3-214ENST00000545358 ADGRB1O14514 1584 aa7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 ZFP91Q96JP5 570 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
NPIPB3-214ENST00000545358 SLC24A1O60721 1099 aa7.54□□□□□ -1.2
NPIPB3-214ENST00000545358 SCUBE2Q9NQ36 999 aa7.54□□□□□ -1.2
NPIPB3-214ENST00000545358 ADGRF5Q8IZF2 1346 aa7.53□□□□□ -1.2
NPIPB3-214ENST00000545358 RGL2O15211 777 aa7.53□□□□□ -1.2
NPIPB3-214ENST00000545358 TESK2Q96S53 571 aa7.53□□□□□ -1.2
NPIPB3-214ENST00000545358 COLQQ9Y215 455 aaPredicted RBP7.53□□□□□ -1.2
NPIPB3-214ENST00000545358 ARHGEF28Q8N1W1 1705 aaKnown RBP7.52□□□□□ -1.2
NPIPB3-214ENST00000545358 FER1L4A9Z1Z3 1794 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 MYOM1P52179 1685 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 QRICH2Q9H0J4 1663 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 KTN1Q86UP2 1357 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 DISP3Q9P2K9 1392 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 CHGAP10645 457 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 TMF1P82094 1093 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 IDI1Q13907 227 aa7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 ILDR1Q86SU0 546 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPIPB3-214ENST00000545358 A2ML1A8K2U0 1454 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 POTEB2H3BUK9 544 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 STK25O00506 426 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 SOX12O15370 315 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 BCL11BQ9C0K0 894 aaPredicted RBP7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 ASXL1Q8IXJ9 1541 aa7.51□□□□□ -1.21
NPIPB3-214ENST00000545358 NLRP1Q9C000 1473 aa7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 TNRQ92752 1358 aa7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 L3MBTL3Q96JM7 780 aaPredicted RBP7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 YTHDC1Q96MU7 727 aaKnown RBP7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 PRKRIP1Q9H875 184 aaPredicted RBP7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 C14orf93Q9H972 538 aaKnown RBP7.5□□□□□ -1.21
NPIPB3-214ENST00000545358 SETD1AO15047 1707 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 C3P01024 1663 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 EFCAB3Q8N7B9 438 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 DNAJC5Q9H3Z4 198 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 STK24Q9Y6E0 443 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 ALKQ9UM73 1620 aa7.49□□□□□ -1.21
NPIPB3-214ENST00000545358 DLC1Q96QB1 1528 aa7.48□□□□□ -1.21
NPIPB3-214ENST00000545358 MLECQ14165 292 aa7.48□□□□□ -1.21
NPIPB3-214ENST00000545358 FBXO31Q5XUX0 539 aaPredicted RBP7.48□□□□□ -1.21
NPIPB3-214ENST00000545358 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
NPIPB3-214ENST00000545358 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
NPIPB3-214ENST00000545358 CENPJQ9HC77 1338 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms