RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 CCDC102AQ96A19 550 aa10.78□□□□□ -0.68
SCN8A-203ENST00000545061 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
SCN8A-203ENST00000545061 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
SCN8A-203ENST00000545061 USH1CQ9Y6N9 552 aa10.78□□□□□ -0.68
SCN8A-203ENST00000545061 SMC6Q96SB8 1091 aa10.78□□□□□ -0.68
SCN8A-203ENST00000545061 MAP3K7CLP57077 242 aa10.78□□□□□ -0.68
SCN8A-203ENST00000545061 CENPQQ7L2Z9 268 aaPredicted RBP10.78□□□□□ -0.68
SCN8A-203ENST00000545061 LMOD3Q0VAK6 560 aa10.77□□□□□ -0.68
SCN8A-203ENST00000545061 PPP1R12BO60237 982 aaPredicted RBP10.77□□□□□ -0.69
SCN8A-203ENST00000545061 TRIM5Q9C035 493 aa10.77□□□□□ -0.69
SCN8A-203ENST00000545061 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.69
SCN8A-203ENST00000545061 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
SCN8A-203ENST00000545061 PDILTQ8N807 584 aa10.77□□□□□ -0.69
SCN8A-203ENST00000545061 RUFY2Q8WXA3 655 aa10.76□□□□□ -0.69
SCN8A-203ENST00000545061 ZKSCAN1P17029 563 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-203ENST00000545061 STMN1P16949 149 aa10.76□□□□□ -0.69
SCN8A-203ENST00000545061 FEZ2Q9UHY8 353 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-203ENST00000545061 MAGEC2Q9UBF1 373 aaPredicted RBP10.76□□□□□ -0.69
SCN8A-203ENST00000545061 HSPA4P34932 840 aa10.75□□□□□ -0.69
SCN8A-203ENST00000545061 RSRC1Q96IZ7 334 aaKnown RBP10.75□□□□□ -0.69
SCN8A-203ENST00000545061 SAFBQ15424 915 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCN8A-203ENST00000545061 A0A1B0GUA9 196 aa10.75□□□□□ -0.69
SCN8A-203ENST00000545061 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
SCN8A-203ENST00000545061 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
SCN8A-203ENST00000545061 FAM114A2Q9NRY5 505 aa10.75□□□□□ -0.69
SCN8A-203ENST00000545061 DZIP1LQ8IYY4 767 aaKnown RBP10.75□□□□□ -0.69
SCN8A-203ENST00000545061 BRMS1Q9HCU9 246 aa10.74□□□□□ -0.69
SCN8A-203ENST00000545061 C10orf67Q8IYJ2 551 aa10.74□□□□□ -0.69
SCN8A-203ENST00000545061 PRPF40AO75400 957 aaKnown RBP10.74□□□□□ -0.69
SCN8A-203ENST00000545061 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
SCN8A-203ENST00000545061 ANKS4BQ8N8V4 417 aa10.74□□□□□ -0.69
SCN8A-203ENST00000545061 SPAG9O60271 1321 aaKnown RBP10.74□□□□□ -0.69
SCN8A-203ENST00000545061 RBM10P98175 930 aaKnown RBP10.74□□□□□ -0.69
SCN8A-203ENST00000545061 PPFIA2O75334 1257 aa10.74□□□□□ -0.69
SCN8A-203ENST00000545061 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
SCN8A-203ENST00000545061 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
SCN8A-203ENST00000545061 TACC1O75410 805 aa10.73□□□□□ -0.69
SCN8A-203ENST00000545061 KTN1Q86UP2 1357 aaKnown RBP10.73□□□□□ -0.69
SCN8A-203ENST00000545061 JAKMIP3Q5VZ66 844 aa10.73□□□□□ -0.69
SCN8A-203ENST00000545061 FMNL2Q96PY5 1086 aa10.73□□□□□ -0.69
SCN8A-203ENST00000545061 BRD2P25440 801 aaKnown RBP10.73□□□□□ -0.69
SCN8A-203ENST00000545061 CCDC160A6NGH7 325 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 CCDC148Q8NFR7 591 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 CPLX1O14810 134 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 TSPY26PQ9H489 355 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 CHMP2AO43633 222 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 HMGB3O15347 200 aaKnown RBP10.72□□□□□ -0.69
SCN8A-203ENST00000545061 CBFA2T2O43439 604 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 CEP120Q8N960 986 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 UBXN4Q92575 508 aa10.72□□□□□ -0.69
SCN8A-203ENST00000545061 WWC2Q6AWC2 1192 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 ZC4H2Q9NQZ6 224 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 XBP1P17861 261 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 KIF5BP33176 963 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 DDX12PQ92771 950 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.71□□□□□ -0.69
SCN8A-203ENST00000545061 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.69
SCN8A-203ENST00000545061 PDCP20941 246 aa10.71□□□□□ -0.7
SCN8A-203ENST00000545061 SMC2O95347 1197 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 SREK1Q8WXA9 508 aaKnown RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 FOXD4L5Q5VV16 416 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 FOXD4L4Q8WXT5 416 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 FERP16591 822 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 STIM1Q13586 685 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 E9PSI1 815 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 RABGAP1Q9Y3P9 1069 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 APBB1O00213 710 aa10.7□□□□□ -0.7
SCN8A-203ENST00000545061 CCDC97Q96F63 343 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCN8A-203ENST00000545061 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 MKRN1Q9UHC7 482 aaKnown RBP10.69□□□□□ -0.7
SCN8A-203ENST00000545061 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
SCN8A-203ENST00000545061 GBP7Q8N8V2 638 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-203ENST00000545061 TAOK3Q9H2K8 898 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 CCDC192P0DO97 292 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 TRIM21P19474 475 aaKnown RBP10.69□□□□□ -0.7
SCN8A-203ENST00000545061 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 RNF187Q5TA31 235 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-203ENST00000545061 KLHL10Q6JEL2 608 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 FILIP1Q7Z7B0 1213 aa10.69□□□□□ -0.7
SCN8A-203ENST00000545061 CETN2P41208 172 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 GON4LQ3T8J9 2241 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 GBP6Q6ZN66 633 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 ROCK1Q13464 1354 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 MSL1Q68DK7 614 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 LUC7L2Q9Y383 392 aaKnown RBP10.68□□□□□ -0.7
SCN8A-203ENST00000545061 TTC31Q49AM3 519 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-203ENST00000545061 NUP133Q8WUM0 1156 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 TRDNQ13061 729 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 ZMYND15Q9H091 742 aa10.68□□□□□ -0.7
SCN8A-203ENST00000545061 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
SCN8A-203ENST00000545061 ERICH2A1L162 156 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms