RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 GOLGA2P5Q9HBQ8 144 aa5.28□□□□□ -1.56
NPIPB3-213ENST00000544154 SOBPA7XYQ1 873 aa5.27□□□□□ -1.57
NPIPB3-213ENST00000544154 DCAF5Q96JK2 942 aa5.27□□□□□ -1.57
NPIPB3-213ENST00000544154 CNTNAP3BQ96NU0 1288 aa5.27□□□□□ -1.57
NPIPB3-213ENST00000544154 EYA1Q99502 592 aa5.27□□□□□ -1.57
NPIPB3-213ENST00000544154 CNTNAP3Q9BZ76 1288 aa5.27□□□□□ -1.57
NPIPB3-213ENST00000544154 RBM27Q9P2N5 1060 aaKnown RBP5.26□□□□□ -1.57
NPIPB3-213ENST00000544154 DPYSL4O14531 572 aa5.25□□□□□ -1.57
NPIPB3-213ENST00000544154 SVOPQ8N4V2 548 aa5.25□□□□□ -1.57
NPIPB3-213ENST00000544154 CAPN5O15484 640 aaPredicted RBP5.24□□□□□ -1.57
NPIPB3-213ENST00000544154 PPFIA3O75145 1194 aa5.24□□□□□ -1.57
NPIPB3-213ENST00000544154 SLC4A3P48751 1232 aa5.24□□□□□ -1.57
NPIPB3-213ENST00000544154 SCARF2Q96GP6 870 aaPredicted RBP5.24□□□□□ -1.57
NPIPB3-213ENST00000544154 MARSP56192 900 aaKnown RBP5.23□□□□□ -1.57
NPIPB3-213ENST00000544154 KMT5BQ4FZB7 885 aa5.23□□□□□ -1.57
NPIPB3-213ENST00000544154 FAM160A2Q8N612 972 aaPredicted RBP5.23□□□□□ -1.57
NPIPB3-213ENST00000544154 CFHP08603 1231 aa5.22□□□□□ -1.57
NPIPB3-213ENST00000544154 ITGB7P26010 798 aa5.22□□□□□ -1.57
NPIPB3-213ENST00000544154 TRIM32Q13049 653 aa5.22□□□□□ -1.57
NPIPB3-213ENST00000544154 CDHR5Q9HBB8 845 aa5.22□□□□□ -1.57
NPIPB3-213ENST00000544154 BAG6P46379 1132 aa5.21□□□□□ -1.58
NPIPB3-213ENST00000544154 GALNT6Q8NCL4 622 aa5.21□□□□□ -1.58
NPIPB3-213ENST00000544154 ZBTB24O43167 697 aaPredicted RBP5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 ECM2O94769 699 aaPredicted RBP5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 FURINP09958 794 aa5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 SLURP2P0DP57 97 aa5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 CAMK2BQ13554 666 aa5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 THAP11Q96EK4 314 aa5.2□□□□□ -1.58
NPIPB3-213ENST00000544154 SLC10A3P09131 477 aa5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 NKX1-1Q15270 411 aaPredicted RBP5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 PUS10Q3MIT2 529 aaKnown RBP5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 RNFT1Q5M7Z0 435 aa5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 PADI6Q6TGC4 694 aa5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 PRDM9Q9NQV7 894 aa5.19□□□□□ -1.58
NPIPB3-213ENST00000544154 ALDH1A1P00352 501 aa5.18□□□□□ -1.58
NPIPB3-213ENST00000544154 REPIN1Q9BWE0 567 aaKnown RBP5.18□□□□□ -1.58
NPIPB3-213ENST00000544154 COL25A1Q9BXS0 654 aaPredicted RBP5.18□□□□□ -1.58
NPIPB3-213ENST00000544154 SKOR1P84550 965 aa5.17□□□□□ -1.58
NPIPB3-213ENST00000544154 RC3H1Q5TC82 1133 aaKnown RBP5.17□□□□□ -1.58
NPIPB3-213ENST00000544154 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
NPIPB3-213ENST00000544154 NPDC1Q9NQX5 325 aaPredicted RBP5.15□□□□□ -1.59
NPIPB3-213ENST00000544154 SIAH2O43255 324 aa5.14□□□□□ -1.59
NPIPB3-213ENST00000544154 MRPL14Q6P1L8 145 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-213ENST00000544154 HS6ST3Q8IZP7 471 aa5.14□□□□□ -1.59
NPIPB3-213ENST00000544154 PURBQ96QR8 312 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-213ENST00000544154 TMEM134Q9H6X4 195 aa5.14□□□□□ -1.59
NPIPB3-213ENST00000544154 CNTNAP5Q8WYK1 1306 aa5.13□□□□□ -1.59
NPIPB3-213ENST00000544154 ARID1BQ8NFD5 2236 aaPredicted RBP5.12□□□□□ -1.59
NPIPB3-213ENST00000544154 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
NPIPB3-213ENST00000544154 LYPD4Q6UWN0 246 aa5.11□□□□□ -1.59
NPIPB3-213ENST00000544154 DNAJB2P25686 324 aa5.1□□□□□ -1.59
NPIPB3-213ENST00000544154 PDIA6Q15084 440 aa5.1□□□□□ -1.59
NPIPB3-213ENST00000544154 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
NPIPB3-213ENST00000544154 PKD2Q13563 968 aa5.08□□□□□ -1.6
NPIPB3-213ENST00000544154 MORN1Q5T089 497 aa5.08□□□□□ -1.6
NPIPB3-213ENST00000544154 NANOS1Q8WY41 292 aaKnown RBP5.08□□□□□ -1.6
NPIPB3-213ENST00000544154 KRBA1A5PL33 1030 aa5.07□□□□□ -1.6
NPIPB3-213ENST00000544154 OSBPP22059 807 aa5.07□□□□□ -1.6
NPIPB3-213ENST00000544154 WNT7BP56706 349 aa5.07□□□□□ -1.6
NPIPB3-213ENST00000544154 SCARF1Q14162 830 aa5.07□□□□□ -1.6
NPIPB3-213ENST00000544154 DNAJC5Q9H3Z4 198 aa5.07□□□□□ -1.6
NPIPB3-213ENST00000544154 PHF20L1A8MW92 1017 aa5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 MAN1A2O60476 641 aa5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 FMNL1O95466 1100 aaPredicted RBP5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 FOXD4L6Q3SYB3 417 aaPredicted RBP5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 MSS51Q4VC12 460 aa5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 ZMYM1Q5SVZ6 1142 aa5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 FOXD4L3Q6VB84 417 aaPredicted RBP5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 WASF2Q9Y6W5 498 aa5.06□□□□□ -1.6
NPIPB3-213ENST00000544154 COBLO75128 1261 aa5.05□□□□□ -1.6
NPIPB3-213ENST00000544154 BRICD5Q6PL45 260 aa5.05□□□□□ -1.6
NPIPB3-213ENST00000544154 CELA2BP08218 269 aaPredicted RBP5.04□□□□□ -1.6
NPIPB3-213ENST00000544154 FECHP22830 423 aa5.04□□□□□ -1.6
NPIPB3-213ENST00000544154 CADPS2Q86UW7 1296 aa5.04□□□□□ -1.6
NPIPB3-213ENST00000544154 SALL2Q9Y467 1007 aaPredicted RBP5.04□□□□□ -1.6
NPIPB3-213ENST00000544154 RCCD1A6NED2 376 aa5.03□□□□□ -1.6
NPIPB3-213ENST00000544154 MMP16P51512 607 aa5.03□□□□□ -1.6
NPIPB3-213ENST00000544154 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
NPIPB3-213ENST00000544154 RYDENQ9NUL5 291 aaKnown RBP5.03□□□□□ -1.6
NPIPB3-213ENST00000544154 SLC27A5Q9Y2P5 690 aa5.03□□□□□ -1.6
NPIPB3-213ENST00000544154 GRXCR2A6NFK2 248 aa5.02□□□□□ -1.61
NPIPB3-213ENST00000544154 ADAMTS2O95450 1211 aa5.02□□□□□ -1.61
NPIPB3-213ENST00000544154 TIMP2P16035 220 aa5.02□□□□□ -1.61
NPIPB3-213ENST00000544154 LAMC2Q13753 1193 aa5.02□□□□□ -1.61
NPIPB3-213ENST00000544154 KLF16Q9BXK1 252 aaPredicted RBP5.02□□□□□ -1.61
NPIPB3-213ENST00000544154 BEND7Q8N7W2 519 aaPredicted RBP5.01□□□□□ -1.61
NPIPB3-213ENST00000544154 DNMT3LQ9UJW3 386 aa5.01□□□□□ -1.61
NPIPB3-213ENST00000544154 SPDYE16A6NNV3 312 aaPredicted RBP5□□□□□ -1.61
NPIPB3-213ENST00000544154 RNF19BQ6ZMZ0 732 aa5□□□□□ -1.61
NPIPB3-213ENST00000544154 MAP3K10Q02779 954 aa4.98□□□□□ -1.61
NPIPB3-213ENST00000544154 ADGRG1Q9Y653 693 aa4.98□□□□□ -1.61
NPIPB3-213ENST00000544154 SOS2Q07890 1332 aaPredicted RBP4.97□□□□□ -1.61
NPIPB3-213ENST00000544154 FUT2Q10981 343 aa4.97□□□□□ -1.61
NPIPB3-213ENST00000544154 SEMA6BQ9H3T3 888 aa4.97□□□□□ -1.61
NPIPB3-213ENST00000544154 GTPBP6O43824 516 aaPredicted RBP4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 PTSQ03393 145 aa4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 ARTNQ5T4W7 220 aa4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 C6orf118Q5T5N4 469 aa4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 VWA5B2Q8N398 1253 aa4.96□□□□□ -1.62
NPIPB3-213ENST00000544154 EHBP1Q8NDI1 1231 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms