RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 BCAR3O75815 825 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 KIAA1211Q6ZU35 1233 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 FAM135AQ9P2D6 1515 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 SYNJ2O15056 1496 aa6.27□□□□□ -1.41
LMO3-229ENST00000543721 TARBP1Q13395 1621 aaKnown RBP6.26□□□□□ -1.41
LMO3-229ENST00000543721 COG6Q9Y2V7 657 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 PRG4Q92954 1404 aaPredicted RBP6.26□□□□□ -1.41
LMO3-229ENST00000543721 NCOA3Q9Y6Q9 1424 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 APAF1O14727 1248 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 MCM5P33992 734 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 PROM2Q8N271 834 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 WDR7Q9Y4E6 1490 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
LMO3-229ENST00000543721 NBPF1Q3BBV0 1214 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 SMAP1Q8IYB5 467 aaPredicted RBP6.26□□□□□ -1.41
LMO3-229ENST00000543721 A2MP01023 1474 aa6.26□□□□□ -1.41
LMO3-229ENST00000543721 DISP1Q96F81 1524 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 ARID3CA6NKF2 412 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 CFAP44Q96MT7 982 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 ATP10AO60312 1499 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 PLEKHD1A6NEE1 506 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 TPRNQ4KMQ1 711 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 POTEDQ86YR6 584 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 WDR63Q8IWG1 891 aa6.25□□□□□ -1.41
LMO3-229ENST00000543721 RNF17Q9BXT8 1623 aaKnown RBP6.25□□□□□ -1.41
LMO3-229ENST00000543721 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
LMO3-229ENST00000543721 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
LMO3-229ENST00000543721 CDC42BPAQ5VT25 1732 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 HSP90AB1P08238 724 aaKnown RBP6.24□□□□□ -1.41
LMO3-229ENST00000543721 RAB3GAP1Q15042 981 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 MAGI2Q86UL8 1455 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 KIF16BQ96L93 1317 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 DYNC1I1O14576 645 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 DDIT3P35638 169 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 CLEC17AQ6ZS10 378 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 PANK1Q8TE04 598 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 ZNF692Q9BU19 519 aaPredicted RBP6.24□□□□□ -1.41
LMO3-229ENST00000543721 KANK1Q14678 1352 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
LMO3-229ENST00000543721 RARSP54136 660 aaKnown RBP6.24□□□□□ -1.41
LMO3-229ENST00000543721 POLR3AO14802 1390 aaPredicted RBP6.24□□□□□ -1.41
LMO3-229ENST00000543721 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 HDAC1Q13547 482 aaPredicted RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 KLHL40Q2TBA0 621 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 UNC13BO14795 1591 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 RGL3Q3MIN7 710 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 WWC1Q8IX03 1113 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 TNPO1Q92973 898 aaKnown RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 CARMIL2Q6F5E8 1435 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 MVPQ14764 893 aaKnown RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 CCDC27Q2M243 656 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 ZKSCAN2Q63HK3 967 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 CCDC146Q8IYE0 955 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 CHMP4BQ9H444 224 aaKnown RBP6.23□□□□□ -1.41
LMO3-229ENST00000543721 PCDHB15Q9Y5E8 787 aa6.23□□□□□ -1.41
LMO3-229ENST00000543721 RTEL1-TNFRSF6BF6WH68 1400 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 SCAF11Q99590 1463 aaKnown RBP6.22□□□□□ -1.41
LMO3-229ENST00000543721 SPRYD3Q8NCJ5 442 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 RUNDC1Q96C34 613 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 ZNF445P59923 1031 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 DDX19BQ9UMR2 479 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 IQGAP1P46940 1657 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 MYO5CQ9NQX4 1742 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 ARHGAP31Q2M1Z3 1444 aa6.22□□□□□ -1.41
LMO3-229ENST00000543721 UTP14CQ5TAP6 766 aaKnown RBP6.21□□□□□ -1.41
LMO3-229ENST00000543721 PRDM4Q9UKN5 801 aa6.21□□□□□ -1.41
LMO3-229ENST00000543721 NOL7Q9UMY1 257 aaKnown RBP6.21□□□□□ -1.41
LMO3-229ENST00000543721 GRIN2AQ12879 1464 aa6.21□□□□□ -1.41
LMO3-229ENST00000543721 MAST1Q9Y2H9 1570 aa6.21□□□□□ -1.41
LMO3-229ENST00000543721 NUCB2P80303 420 aa6.21□□□□□ -1.42
LMO3-229ENST00000543721 C1QBPQ07021 282 aaKnown RBP6.21□□□□□ -1.42
LMO3-229ENST00000543721 FTSJ3Q8IY81 847 aaKnown RBP6.21□□□□□ -1.42
LMO3-229ENST00000543721 IQGAP3Q86VI3 1631 aa6.21□□□□□ -1.42
LMO3-229ENST00000543721 MAGI1Q96QZ7 1491 aaPredicted RBP6.21□□□□□ -1.42
LMO3-229ENST00000543721 DZIP1LQ8IYY4 767 aaKnown RBP6.21□□□□□ -1.42
LMO3-229ENST00000543721 GAS2L3Q86XJ1 694 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 CCDC39Q9UFE4 941 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 DDX49Q9Y6V7 483 aaKnown RBP6.2□□□□□ -1.42
LMO3-229ENST00000543721 KDM5AP29375 1690 aaKnown RBP6.2□□□□□ -1.42
LMO3-229ENST00000543721 PLA2R1Q13018 1463 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
LMO3-229ENST00000543721 SASS6Q6UVJ0 657 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 RIPK4P57078 832 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 CFAP53Q96M91 514 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 R3HCC1Q9Y3T6 440 aaKnown RBP6.2□□□□□ -1.42
LMO3-229ENST00000543721 IFT140Q96RY7 1462 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 DUOX2Q9NRD8 1548 aa6.2□□□□□ -1.42
LMO3-229ENST00000543721 FAM13BQ9NYF5 915 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 UQCRHLA0A096LP55 91 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 IPO8O15397 1037 aaKnown RBP6.19□□□□□ -1.42
LMO3-229ENST00000543721 UQCRHP07919 91 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 PDLIM2Q96JY6 352 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 ZKSCAN5Q9Y2L8 839 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 TTC37Q6PGP7 1564 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 SHROOM2Q13796 1616 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms