RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
VEGFB-204ENST00000543462 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
VEGFB-204ENST00000543462 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
VEGFB-204ENST00000543462 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
VEGFB-204ENST00000543462 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
VEGFB-204ENST00000543462 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
VEGFB-204ENST00000543462 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
VEGFB-204ENST00000543462 WAPLQ7Z5K2 1190 aa14.25□□□□□ -0.13
VEGFB-204ENST00000543462 STK26Q9P289 416 aa14.25□□□□□ -0.13
VEGFB-204ENST00000543462 TULP4Q9NRJ4 1543 aa14.25□□□□□ -0.13
VEGFB-204ENST00000543462 KIF1AQ12756 1690 aa14.24□□□□□ -0.13
VEGFB-204ENST00000543462 COL16A1Q07092 1604 aaPredicted RBP14.24□□□□□ -0.13
VEGFB-204ENST00000543462 PRAM1Q96QH2 718 aa14.23□□□□□ -0.13
VEGFB-204ENST00000543462 C1orf167Q5SNV9 1468 aa14.23□□□□□ -0.13
VEGFB-204ENST00000543462 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
VEGFB-204ENST00000543462 TRAK1Q9UPV9 953 aa14.22□□□□□ -0.13
VEGFB-204ENST00000543462 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
VEGFB-204ENST00000543462 PHLPP1O60346 1717 aa14.21□□□□□ -0.13
VEGFB-204ENST00000543462 ATP7BP35670 1465 aa14.21□□□□□ -0.13
VEGFB-204ENST00000543462 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
VEGFB-204ENST00000543462 TOM1O60784 492 aa14.2□□□□□ -0.14
VEGFB-204ENST00000543462 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
VEGFB-204ENST00000543462 ILDR1Q86SU0 546 aaPredicted RBP14.18□□□□□ -0.14
VEGFB-204ENST00000543462 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
VEGFB-204ENST00000543462 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
VEGFB-204ENST00000543462 EIF3AQ14152 1382 aaKnown RBP14.17□□□□□ -0.14
VEGFB-204ENST00000543462 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
VEGFB-204ENST00000543462 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
VEGFB-204ENST00000543462 ATF3P18847 181 aa14.16□□□□□ -0.14
VEGFB-204ENST00000543462 C14orf37Q86TY3 774 aa14.16□□□□□ -0.14
VEGFB-204ENST00000543462 AKAP12Q02952 1782 aa14.15□□□□□ -0.14
VEGFB-204ENST00000543462 PXDNQ92626 1479 aa14.15□□□□□ -0.14
VEGFB-204ENST00000543462 POGKQ9P215 609 aa14.15□□□□□ -0.14
VEGFB-204ENST00000543462 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.15
VEGFB-204ENST00000543462 USP47Q96K76 1375 aa14.14□□□□□ -0.15
VEGFB-204ENST00000543462 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
VEGFB-204ENST00000543462 BRINP3Q76B58 766 aa14.14□□□□□ -0.15
VEGFB-204ENST00000543462 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
VEGFB-204ENST00000543462 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
VEGFB-204ENST00000543462 MYOM1P52179 1685 aa14.14□□□□□ -0.15
VEGFB-204ENST00000543462 COL22A1Q8NFW1 1626 aaPredicted RBP14.13□□□□□ -0.15
VEGFB-204ENST00000543462 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
VEGFB-204ENST00000543462 WASLO00401 505 aaPredicted RBP14.12□□□□□ -0.15
VEGFB-204ENST00000543462 PIP4K2BP78356 416 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 TESK2Q96S53 571 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 NRKQ7Z2Y5 1582 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 ABCA3Q99758 1704 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 CRYBG1Q9Y4K1 1723 aa14.12□□□□□ -0.15
VEGFB-204ENST00000543462 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
VEGFB-204ENST00000543462 HSPA1LP34931 641 aa14.09□□□□□ -0.15
VEGFB-204ENST00000543462 ORAI2Q96SN7 254 aa14.09□□□□□ -0.15
VEGFB-204ENST00000543462 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
VEGFB-204ENST00000543462 SOS2Q07890 1332 aaPredicted RBP14.07□□□□□ -0.16
VEGFB-204ENST00000543462 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
VEGFB-204ENST00000543462 POLR3AO14802 1390 aaPredicted RBP14.07□□□□□ -0.16
VEGFB-204ENST00000543462 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
VEGFB-204ENST00000543462 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
VEGFB-204ENST00000543462 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
VEGFB-204ENST00000543462 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
VEGFB-204ENST00000543462 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
VEGFB-204ENST00000543462 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
VEGFB-204ENST00000543462 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
VEGFB-204ENST00000543462 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
VEGFB-204ENST00000543462 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
VEGFB-204ENST00000543462 PPIP5K1Q6PFW1 1433 aa14.04□□□□□ -0.16
VEGFB-204ENST00000543462 DDX17Q92841 729 aaKnown RBP14.03□□□□□ -0.16
VEGFB-204ENST00000543462 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
VEGFB-204ENST00000543462 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
VEGFB-204ENST00000543462 ATAD2Q6PL18 1390 aa14.03□□□□□ -0.16
VEGFB-204ENST00000543462 PIK3C2AO00443 1686 aa14.03□□□□□ -0.16
VEGFB-204ENST00000543462 PHRF1Q9P1Y6 1649 aaKnown RBP14.02□□□□□ -0.16
VEGFB-204ENST00000543462 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.16
VEGFB-204ENST00000543462 SSH2Q76I76 1423 aa14.02□□□□□ -0.16
VEGFB-204ENST00000543462 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.17
VEGFB-204ENST00000543462 ESCO1Q5FWF5 840 aa14.02□□□□□ -0.17
VEGFB-204ENST00000543462 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
VEGFB-204ENST00000543462 LRP6O75581 1613 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 CABP2Q9NPB3 220 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
VEGFB-204ENST00000543462 JCADQ9P266 1359 aa14□□□□□ -0.17
VEGFB-204ENST00000543462 FOXO3O43524 673 aa13.99□□□□□ -0.17
VEGFB-204ENST00000543462 USP6P35125 1406 aa13.98□□□□□ -0.17
VEGFB-204ENST00000543462 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
VEGFB-204ENST00000543462 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
VEGFB-204ENST00000543462 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
VEGFB-204ENST00000543462 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
VEGFB-204ENST00000543462 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
VEGFB-204ENST00000543462 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
VEGFB-204ENST00000543462 ACEP12821 1306 aa13.96□□□□□ -0.17
VEGFB-204ENST00000543462 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
VEGFB-204ENST00000543462 PMFBP1Q8TBY8 1022 aa13.96□□□□□ -0.17
VEGFB-204ENST00000543462 KIF20BQ96Q89 1820 aa13.96□□□□□ -0.17
VEGFB-204ENST00000543462 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
VEGFB-204ENST00000543462 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
VEGFB-204ENST00000543462 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
VEGFB-204ENST00000543462 SLIT3O75094 1523 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms