RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
MRPL48-212ENST00000543374 USB1Q9BQ65 265 aaKnown RBP11.78□□□□□ -0.52
MRPL48-212ENST00000543374 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
MRPL48-212ENST00000543374 MMP16P51512 607 aa11.77□□□□□ -0.53
MRPL48-212ENST00000543374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
MRPL48-212ENST00000543374 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
MRPL48-212ENST00000543374 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
MRPL48-212ENST00000543374 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
MRPL48-212ENST00000543374 HOXA2O43364 376 aa11.72□□□□□ -0.53
MRPL48-212ENST00000543374 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
MRPL48-212ENST00000543374 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
MRPL48-212ENST00000543374 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.53
MRPL48-212ENST00000543374 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
MRPL48-212ENST00000543374 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
MRPL48-212ENST00000543374 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
MRPL48-212ENST00000543374 WNT7AO00755 349 aa11.68□□□□□ -0.54
MRPL48-212ENST00000543374 AVPP01185 164 aa11.68□□□□□ -0.54
MRPL48-212ENST00000543374 TRIM32Q13049 653 aa11.68□□□□□ -0.54
MRPL48-212ENST00000543374 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
MRPL48-212ENST00000543374 REPIN1Q9BWE0 567 aaKnown RBP11.67□□□□□ -0.54
MRPL48-212ENST00000543374 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
MRPL48-212ENST00000543374 BARGINQ6ZT62 677 aa11.65□□□□□ -0.54
MRPL48-212ENST00000543374 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
MRPL48-212ENST00000543374 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
MRPL48-212ENST00000543374 AXIN1O15169 862 aa11.63□□□□□ -0.55
MRPL48-212ENST00000543374 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
MRPL48-212ENST00000543374 SMCPP49901 116 aaPredicted RBP11.63□□□□□ -0.55
MRPL48-212ENST00000543374 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
MRPL48-212ENST00000543374 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
MRPL48-212ENST00000543374 ZMYND10O75800 440 aa11.62□□□□□ -0.55
MRPL48-212ENST00000543374 JUNDP17535 347 aa11.62□□□□□ -0.55
MRPL48-212ENST00000543374 WNT7BP56706 349 aa11.62□□□□□ -0.55
MRPL48-212ENST00000543374 HLA-CQ95604 372 aa11.62□□□□□ -0.55
MRPL48-212ENST00000543374 FDX1P10109 184 aa11.6□□□□□ -0.55
MRPL48-212ENST00000543374 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
MRPL48-212ENST00000543374 POTECB2RU33 542 aa11.59□□□□□ -0.55
MRPL48-212ENST00000543374 AMHR2Q16671 573 aa11.59□□□□□ -0.55
MRPL48-212ENST00000543374 MRGPRX2Q96LB1 330 aa11.59□□□□□ -0.55
MRPL48-212ENST00000543374 DIXDC1Q155Q3 683 aa11.58□□□□□ -0.56
MRPL48-212ENST00000543374 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
MRPL48-212ENST00000543374 GUCA2AQ02747 115 aa11.57□□□□□ -0.56
MRPL48-212ENST00000543374 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
MRPL48-212ENST00000543374 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
MRPL48-212ENST00000543374 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
MRPL48-212ENST00000543374 SPIRE2Q8WWL2 714 aa11.56□□□□□ -0.56
MRPL48-212ENST00000543374 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
MRPL48-212ENST00000543374 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
MRPL48-212ENST00000543374 SMPD1P17405 629 aa11.55□□□□□ -0.56
MRPL48-212ENST00000543374 MS4A1P11836 297 aa11.53□□□□□ -0.56
MRPL48-212ENST00000543374 GJA5P36382 358 aa11.53□□□□□ -0.56
MRPL48-212ENST00000543374 PCDHGC3Q9UN70 934 aa11.53□□□□□ -0.56
MRPL48-212ENST00000543374 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.57
MRPL48-212ENST00000543374 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
MRPL48-212ENST00000543374 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
MRPL48-212ENST00000543374 J3QL48 77 aa11.5□□□□□ -0.57
MRPL48-212ENST00000543374 SKOR1P84550 965 aa11.5□□□□□ -0.57
MRPL48-212ENST00000543374 PTPRNQ16849 979 aa11.5□□□□□ -0.57
MRPL48-212ENST00000543374 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
MRPL48-212ENST00000543374 DACH1Q9UI36 760 aa11.5□□□□□ -0.57
MRPL48-212ENST00000543374 MTMR2Q13614 643 aa11.49□□□□□ -0.57
MRPL48-212ENST00000543374 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
MRPL48-212ENST00000543374 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
MRPL48-212ENST00000543374 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
MRPL48-212ENST00000543374 MOXD2PA6NHM9 499 aa11.48□□□□□ -0.57
MRPL48-212ENST00000543374 NDUFV2P19404 249 aa11.48□□□□□ -0.57
MRPL48-212ENST00000543374 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
MRPL48-212ENST00000543374 AK7Q96M32 723 aa11.48□□□□□ -0.57
MRPL48-212ENST00000543374 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
MRPL48-212ENST00000543374 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
MRPL48-212ENST00000543374 EHBP1Q8NDI1 1231 aa11.47□□□□□ -0.57
MRPL48-212ENST00000543374 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
MRPL48-212ENST00000543374 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
MRPL48-212ENST00000543374 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
MRPL48-212ENST00000543374 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
MRPL48-212ENST00000543374 HPS1Q92902 700 aa11.44□□□□□ -0.58
MRPL48-212ENST00000543374 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
MRPL48-212ENST00000543374 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
MRPL48-212ENST00000543374 TRIM66O15016 1216 aa11.43□□□□□ -0.58
MRPL48-212ENST00000543374 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
MRPL48-212ENST00000543374 SIAH2O43255 324 aa11.42□□□□□ -0.58
MRPL48-212ENST00000543374 SH3BP2P78314 561 aa11.42□□□□□ -0.58
MRPL48-212ENST00000543374 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
MRPL48-212ENST00000543374 WASF2Q9Y6W5 498 aa11.42□□□□□ -0.58
MRPL48-212ENST00000543374 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
MRPL48-212ENST00000543374 PLEKHG3A1L390 1219 aa11.4□□□□□ -0.58
MRPL48-212ENST00000543374 PRPF38BQ5VTL8 546 aaKnown RBP11.4□□□□□ -0.58
MRPL48-212ENST00000543374 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
MRPL48-212ENST00000543374 SPTLC1O15269 473 aa11.39□□□□□ -0.59
MRPL48-212ENST00000543374 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
MRPL48-212ENST00000543374 WFS1O76024 890 aa11.38□□□□□ -0.59
MRPL48-212ENST00000543374 VARSP26640 1264 aaKnown RBP11.38□□□□□ -0.59
MRPL48-212ENST00000543374 LYPD8Q6UX82 237 aa11.38□□□□□ -0.59
MRPL48-212ENST00000543374 MPNDQ8N594 471 aa11.38□□□□□ -0.59
MRPL48-212ENST00000543374 BAP1Q92560 729 aa11.37□□□□□ -0.59
MRPL48-212ENST00000543374 LCE2AQ5TA79 106 aaPredicted RBP11.36□□□□□ -0.59
MRPL48-212ENST00000543374 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
MRPL48-212ENST00000543374 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
MRPL48-212ENST00000543374 CTHP32929 405 aa11.35□□□□□ -0.59
MRPL48-212ENST00000543374 HRCP23327 699 aa11.34□□□□□ -0.59
MRPL48-212ENST00000543374 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms