RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 SOS2Q07890 1332 aaPredicted RBP7.64□□□□□ -1.19
ZEB1-208ENST00000542815 RREB1Q92766 1687 aa7.64□□□□□ -1.19
ZEB1-208ENST00000542815 ANKARQ7Z5J8 1434 aa7.64□□□□□ -1.19
ZEB1-208ENST00000542815 ZNF772Q68DY9 489 aaPredicted RBP7.64□□□□□ -1.19
ZEB1-208ENST00000542815 BRWD3Q6RI45 1802 aa7.64□□□□□ -1.19
ZEB1-208ENST00000542815 TNS1Q9HBL0 1735 aaKnown RBP7.64□□□□□ -1.19
ZEB1-208ENST00000542815 PROSER2Q86WR7 435 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-208ENST00000542815 PHRF1Q9P1Y6 1649 aaKnown RBP7.63□□□□□ -1.19
ZEB1-208ENST00000542815 METP08581 1390 aa7.63□□□□□ -1.19
ZEB1-208ENST00000542815 RGPD8O14715 1765 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-208ENST00000542815 NUP155O75694 1391 aa7.63□□□□□ -1.19
ZEB1-208ENST00000542815 LRPPRCP42704 1394 aaKnown RBP7.63□□□□□ -1.19
ZEB1-208ENST00000542815 ABCC11Q96J66 1382 aa7.63□□□□□ -1.19
ZEB1-208ENST00000542815 ANKRD30BQ9BXX2 1392 aa7.63□□□□□ -1.19
ZEB1-208ENST00000542815 GLI3P10071 1580 aa7.62□□□□□ -1.19
ZEB1-208ENST00000542815 RGS12O14924 1447 aa7.62□□□□□ -1.19
ZEB1-208ENST00000542815 SLIT2O94813 1529 aa7.62□□□□□ -1.19
ZEB1-208ENST00000542815 PIP4K2BP78356 416 aa7.62□□□□□ -1.19
ZEB1-208ENST00000542815 POTEAQ6S8J7 498 aa7.61□□□□□ -1.19
ZEB1-208ENST00000542815 BRINP3Q76B58 766 aa7.61□□□□□ -1.19
ZEB1-208ENST00000542815 ABCC6O95255 1503 aa7.61□□□□□ -1.19
ZEB1-208ENST00000542815 COL24A1Q17RW2 1714 aa7.6□□□□□ -1.19
ZEB1-208ENST00000542815 SBNO1A3KN83 1393 aa7.59□□□□□ -1.19
ZEB1-208ENST00000542815 LMO7Q8WWI1 1683 aa7.59□□□□□ -1.19
ZEB1-208ENST00000542815 PHF23Q9BUL5 403 aaPredicted RBP7.59□□□□□ -1.19
ZEB1-208ENST00000542815 PARP4Q9UKK3 1724 aaKnown RBP7.59□□□□□ -1.2
ZEB1-208ENST00000542815 ROBO2Q9HCK4 1378 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 DISP2A7MBM2 1401 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 STAC3Q96MF2 364 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 TULP4Q9NRJ4 1543 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 SLC24A1O60721 1099 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 FNBP4Q8N3X1 1017 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-208ENST00000542815 CCDC144AA2RUR9 1427 aa7.58□□□□□ -1.2
ZEB1-208ENST00000542815 SLC26A8Q96RN1 970 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 STAG3Q9UJ98 1225 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 QSER1Q2KHR3 1735 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 BCL9LQ86UU0 1499 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 TRPM1Q7Z4N2 1603 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 PEAK1Q9H792 1746 aa7.57□□□□□ -1.2
ZEB1-208ENST00000542815 LRRC59Q96AG4 307 aaKnown RBP7.56□□□□□ -1.2
ZEB1-208ENST00000542815 ATP7BP35670 1465 aa7.56□□□□□ -1.2
ZEB1-208ENST00000542815 AKAP12Q02952 1782 aa7.56□□□□□ -1.2
ZEB1-208ENST00000542815 EIF3AQ14152 1382 aaKnown RBP7.56□□□□□ -1.2
ZEB1-208ENST00000542815 VGFO15240 615 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-208ENST00000542815 BRD4O60885 1362 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-208ENST00000542815 ATF3P18847 181 aa7.55□□□□□ -1.2
ZEB1-208ENST00000542815 CCDC125Q86Z20 511 aa7.55□□□□□ -1.2
ZEB1-208ENST00000542815 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.2
ZEB1-208ENST00000542815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.55□□□□□ -1.2
ZEB1-208ENST00000542815 NRKQ7Z2Y5 1582 aa7.55□□□□□ -1.2
ZEB1-208ENST00000542815 YTHDC2Q9H6S0 1430 aaKnown RBP7.55□□□□□ -1.2
ZEB1-208ENST00000542815 ATAD2Q6PL18 1390 aa7.55□□□□□ -1.2
ZEB1-208ENST00000542815 QRICH2Q9H0J4 1663 aa7.54□□□□□ -1.2
ZEB1-208ENST00000542815 NUP188Q5SRE5 1749 aa7.54□□□□□ -1.2
ZEB1-208ENST00000542815 PPP1R15AO75807 674 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-208ENST00000542815 BCL11AQ9H165 835 aa7.54□□□□□ -1.2
ZEB1-208ENST00000542815 TNS3Q68CZ2 1445 aa7.54□□□□□ -1.2
ZEB1-208ENST00000542815 CHIC2Q9UKJ5 165 aa7.53□□□□□ -1.2
ZEB1-208ENST00000542815 COL18A1P39060 1754 aa7.53□□□□□ -1.2
ZEB1-208ENST00000542815 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
ZEB1-208ENST00000542815 ONECUT3O60422 494 aaPredicted RBP7.53□□□□□ -1.2
ZEB1-208ENST00000542815 RBM6P78332 1123 aaKnown RBP7.53□□□□□ -1.2
ZEB1-208ENST00000542815 DIEXFQ68CQ4 756 aaKnown RBP7.52□□□□□ -1.21
ZEB1-208ENST00000542815 SBF2Q86WG5 1849 aa7.52□□□□□ -1.21
ZEB1-208ENST00000542815 SLIT3O75094 1523 aa7.52□□□□□ -1.21
ZEB1-208ENST00000542815 FAM50AQ14320 339 aaKnown RBP7.51□□□□□ -1.21
ZEB1-208ENST00000542815 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
ZEB1-208ENST00000542815 NPHP3Q7Z494 1330 aa7.51□□□□□ -1.21
ZEB1-208ENST00000542815 CASZ1Q86V15 1759 aa7.51□□□□□ -1.21
ZEB1-208ENST00000542815 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
ZEB1-208ENST00000542815 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
ZEB1-208ENST00000542815 ARHGEF10O15013 1369 aa7.5□□□□□ -1.21
ZEB1-208ENST00000542815 RXRBP28702 533 aa7.5□□□□□ -1.21
ZEB1-208ENST00000542815 AFF2P51816 1311 aa7.5□□□□□ -1.21
ZEB1-208ENST00000542815 CENPBP07199 599 aaPredicted RBP7.5□□□□□ -1.21
ZEB1-208ENST00000542815 BCL9O00512 1426 aa7.49□□□□□ -1.21
ZEB1-208ENST00000542815 BLMP54132 1417 aaPredicted RBP7.49□□□□□ -1.21
ZEB1-208ENST00000542815 C14orf93Q9H972 538 aaKnown RBP7.49□□□□□ -1.21
ZEB1-208ENST00000542815 SPATA31A3Q5VYP0 1347 aa7.49□□□□□ -1.21
ZEB1-208ENST00000542815 FOXD1Q16676 465 aa7.48□□□□□ -1.21
ZEB1-208ENST00000542815 TRPC5Q9UL62 973 aaPredicted RBP7.48□□□□□ -1.21
ZEB1-208ENST00000542815 POLR3AO14802 1390 aaPredicted RBP7.47□□□□□ -1.21
ZEB1-208ENST00000542815 NGLY1Q96IV0 654 aa7.47□□□□□ -1.21
ZEB1-208ENST00000542815 LRRC37A3O60309 1634 aa7.47□□□□□ -1.21
ZEB1-208ENST00000542815 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.21
ZEB1-208ENST00000542815 ZNF316A6NFI3 1004 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-208ENST00000542815 PIK3C2AO00443 1686 aa7.45□□□□□ -1.22
ZEB1-208ENST00000542815 DHX57Q6P158 1386 aaKnown RBP7.45□□□□□ -1.22
ZEB1-208ENST00000542815 PAPPAQ13219 1627 aa7.45□□□□□ -1.22
ZEB1-208ENST00000542815 CPDO75976 1380 aa7.45□□□□□ -1.22
ZEB1-208ENST00000542815 VPS72Q15906 364 aa7.44□□□□□ -1.22
ZEB1-208ENST00000542815 NHSQ6T4R5 1651 aa7.44□□□□□ -1.22
ZEB1-208ENST00000542815 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
ZEB1-208ENST00000542815 ADGRF5Q8IZF2 1346 aa7.44□□□□□ -1.22
ZEB1-208ENST00000542815 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-208ENST00000542815 SSH2Q76I76 1423 aa7.43□□□□□ -1.22
ZEB1-208ENST00000542815 PLEKHH1Q9ULM0 1364 aa7.42□□□□□ -1.22
ZEB1-208ENST00000542815 MEX3CQ5U5Q3 659 aaKnown RBP7.42□□□□□ -1.22
ZEB1-208ENST00000542815 NEUROD1Q13562 356 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms