RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 POLR1AO95602 1720 aaPredicted RBP11.13□□□□□ -0.63
MRPL40P1-201ENST00000542687 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
MRPL40P1-201ENST00000542687 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 DISP3Q9P2K9 1392 aa11.12□□□□□ -0.63
MRPL40P1-201ENST00000542687 WASLO00401 505 aaPredicted RBP11.11□□□□□ -0.63
MRPL40P1-201ENST00000542687 SETD1AO15047 1707 aaKnown RBP11.1□□□□□ -0.63
MRPL40P1-201ENST00000542687 RBM33Q96EV2 1170 aaKnown RBP11.1□□□□□ -0.63
MRPL40P1-201ENST00000542687 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
MRPL40P1-201ENST00000542687 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
MRPL40P1-201ENST00000542687 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
MRPL40P1-201ENST00000542687 CPS1P31327 1500 aa11.09□□□□□ -0.63
MRPL40P1-201ENST00000542687 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
MRPL40P1-201ENST00000542687 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
MRPL40P1-201ENST00000542687 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
MRPL40P1-201ENST00000542687 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
MRPL40P1-201ENST00000542687 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
MRPL40P1-201ENST00000542687 TMEM94Q12767 1356 aa11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 SLC12A5Q9H2X9 1139 aa11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 PANK3Q9H999 370 aa11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
MRPL40P1-201ENST00000542687 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
MRPL40P1-201ENST00000542687 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
MRPL40P1-201ENST00000542687 ATF3P18847 181 aa11.04□□□□□ -0.64
MRPL40P1-201ENST00000542687 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
MRPL40P1-201ENST00000542687 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
MRPL40P1-201ENST00000542687 ADGRL3Q9HAR2 1447 aa11.03□□□□□ -0.64
MRPL40P1-201ENST00000542687 SOCS7O14512 581 aa11.03□□□□□ -0.64
MRPL40P1-201ENST00000542687 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
MRPL40P1-201ENST00000542687 TULP4Q9NRJ4 1543 aa11.03□□□□□ -0.64
MRPL40P1-201ENST00000542687 QRICH2Q9H0J4 1663 aa11.02□□□□□ -0.64
MRPL40P1-201ENST00000542687 UBAP1LF5GYI3 381 aa11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 MSH6P52701 1360 aa11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 NINLQ9Y2I6 1382 aa11.02□□□□□ -0.65
MRPL40P1-201ENST00000542687 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
MRPL40P1-201ENST00000542687 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
MRPL40P1-201ENST00000542687 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
MRPL40P1-201ENST00000542687 LRRC7Q96NW7 1537 aa10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 ANP32CO43423 234 aa10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 ESCO1Q5FWF5 840 aa10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 PPIP5K1Q6PFW1 1433 aa10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 ANKARQ7Z5J8 1434 aa10.99□□□□□ -0.65
MRPL40P1-201ENST00000542687 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 NGDNQ8NEJ9 315 aaKnown RBP10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 ADGRB2O60241 1585 aa10.98□□□□□ -0.65
MRPL40P1-201ENST00000542687 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
MRPL40P1-201ENST00000542687 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
MRPL40P1-201ENST00000542687 DCCP43146 1447 aa10.97□□□□□ -0.65
MRPL40P1-201ENST00000542687 ATP7BP35670 1465 aa10.96□□□□□ -0.65
MRPL40P1-201ENST00000542687 ACEP12821 1306 aa10.96□□□□□ -0.65
MRPL40P1-201ENST00000542687 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.65
MRPL40P1-201ENST00000542687 SLAIN2Q9P270 581 aa10.96□□□□□ -0.65
MRPL40P1-201ENST00000542687 CDC42BPGQ6DT37 1551 aa10.95□□□□□ -0.66
MRPL40P1-201ENST00000542687 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
MRPL40P1-201ENST00000542687 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
MRPL40P1-201ENST00000542687 TOM1O60784 492 aa10.95□□□□□ -0.66
MRPL40P1-201ENST00000542687 ORAI2Q96SN7 254 aa10.95□□□□□ -0.66
MRPL40P1-201ENST00000542687 C1orf167Q5SNV9 1468 aa10.94□□□□□ -0.66
MRPL40P1-201ENST00000542687 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
MRPL40P1-201ENST00000542687 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
MRPL40P1-201ENST00000542687 PSME1Q06323 249 aa10.94□□□□□ -0.66
MRPL40P1-201ENST00000542687 CC2D1BQ5T0F9 858 aaKnown RBP10.94□□□□□ -0.66
MRPL40P1-201ENST00000542687 NSD3Q9BZ95 1437 aa10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 RALBP1Q15311 655 aa10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 MIER1Q8N108 512 aa10.93□□□□□ -0.66
MRPL40P1-201ENST00000542687 MST1RQ04912 1400 aa10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 POLR3AO14802 1390 aaPredicted RBP10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 FOXO3O43524 673 aa10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
MRPL40P1-201ENST00000542687 MORC1Q86VD1 984 aa10.91□□□□□ -0.66
MRPL40P1-201ENST00000542687 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
MRPL40P1-201ENST00000542687 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 TTC21BQ7Z4L5 1316 aa10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 FYB1O15117 783 aa10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 KRT28Q7Z3Y7 464 aa10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
MRPL40P1-201ENST00000542687 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms