RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
C12orf56-205ENST00000542397 BRICD5Q6PL45 260 aa9.33□□□□□ -0.92
C12orf56-205ENST00000542397 FAM160A2Q8N612 972 aaPredicted RBP9.32□□□□□ -0.92
C12orf56-205ENST00000542397 USP46P62068 366 aa9.31□□□□□ -0.92
C12orf56-205ENST00000542397 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
C12orf56-205ENST00000542397 RNF19BQ6ZMZ0 732 aa9.31□□□□□ -0.92
C12orf56-205ENST00000542397 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
C12orf56-205ENST00000542397 Q3C1V9 767 aa9.3□□□□□ -0.92
C12orf56-205ENST00000542397 PLA2G2CQ5R387 149 aa9.3□□□□□ -0.92
C12orf56-205ENST00000542397 ZNF598Q86UK7 904 aaKnown RBP9.3□□□□□ -0.92
C12orf56-205ENST00000542397 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
C12orf56-205ENST00000542397 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
C12orf56-205ENST00000542397 NESP48681 1621 aa9.3□□□□□ -0.92
C12orf56-205ENST00000542397 HOXA2O43364 376 aa9.28□□□□□ -0.92
C12orf56-205ENST00000542397 AMHR2Q16671 573 aa9.28□□□□□ -0.92
C12orf56-205ENST00000542397 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
C12orf56-205ENST00000542397 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
C12orf56-205ENST00000542397 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
C12orf56-205ENST00000542397 TRIM67Q6ZTA4 783 aa9.27□□□□□ -0.93
C12orf56-205ENST00000542397 HLA-CQ95604 372 aa9.27□□□□□ -0.93
C12orf56-205ENST00000542397 PRDM9Q9NQV7 894 aa9.27□□□□□ -0.93
C12orf56-205ENST00000542397 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.93
C12orf56-205ENST00000542397 THOC2Q8NI27 1593 aaKnown RBP9.27□□□□□ -0.93
C12orf56-205ENST00000542397 ZNF697Q5TEC3 545 aa9.26□□□□□ -0.93
C12orf56-205ENST00000542397 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
C12orf56-205ENST00000542397 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
C12orf56-205ENST00000542397 RPIAP49247 311 aa9.24□□□□□ -0.93
C12orf56-205ENST00000542397 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
C12orf56-205ENST00000542397 PRR20EP86478 221 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 PRR20CP86479 221 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 PRR20DP86480 221 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 PRR20BP86481 221 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 PRR20AP86496 221 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
C12orf56-205ENST00000542397 AK7Q96M32 723 aa9.23□□□□□ -0.93
C12orf56-205ENST00000542397 TRIM66O15016 1216 aa9.22□□□□□ -0.93
C12orf56-205ENST00000542397 MMP16P51512 607 aa9.22□□□□□ -0.93
C12orf56-205ENST00000542397 GUCA2AQ02747 115 aa9.22□□□□□ -0.93
C12orf56-205ENST00000542397 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.94
C12orf56-205ENST00000542397 GDF9O60383 454 aa9.2□□□□□ -0.94
C12orf56-205ENST00000542397 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
C12orf56-205ENST00000542397 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
C12orf56-205ENST00000542397 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
C12orf56-205ENST00000542397 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
C12orf56-205ENST00000542397 PARP9Q8IXQ6 854 aa9.19□□□□□ -0.94
C12orf56-205ENST00000542397 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
C12orf56-205ENST00000542397 ZBTB24O43167 697 aaPredicted RBP9.18□□□□□ -0.94
C12orf56-205ENST00000542397 FDX1P10109 184 aa9.18□□□□□ -0.94
C12orf56-205ENST00000542397 TREML4Q6UXN2 200 aa9.18□□□□□ -0.94
C12orf56-205ENST00000542397 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
C12orf56-205ENST00000542397 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
C12orf56-205ENST00000542397 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
C12orf56-205ENST00000542397 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
C12orf56-205ENST00000542397 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
C12orf56-205ENST00000542397 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
C12orf56-205ENST00000542397 FOXC1Q12948 553 aa9.16□□□□□ -0.94
C12orf56-205ENST00000542397 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
C12orf56-205ENST00000542397 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
C12orf56-205ENST00000542397 MOXD2PA6NHM9 499 aa9.15□□□□□ -0.94
C12orf56-205ENST00000542397 DGAT1O75907 488 aa9.15□□□□□ -0.94
C12orf56-205ENST00000542397 JUNDP17535 347 aa9.15□□□□□ -0.94
C12orf56-205ENST00000542397 NDUFV2P19404 249 aa9.15□□□□□ -0.94
C12orf56-205ENST00000542397 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
C12orf56-205ENST00000542397 BAZ1AQ9NRL2 1556 aaPredicted RBP9.15□□□□□ -0.95
C12orf56-205ENST00000542397 C6orf229H3BNL8 230 aa9.14□□□□□ -0.95
C12orf56-205ENST00000542397 MS4A1P11836 297 aa9.14□□□□□ -0.95
C12orf56-205ENST00000542397 PKDCCQ504Y2 493 aa9.14□□□□□ -0.95
C12orf56-205ENST00000542397 PDE4DQ08499 809 aa9.13□□□□□ -0.95
C12orf56-205ENST00000542397 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
C12orf56-205ENST00000542397 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
C12orf56-205ENST00000542397 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
C12orf56-205ENST00000542397 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
C12orf56-205ENST00000542397 TRIM32Q13049 653 aa9.12□□□□□ -0.95
C12orf56-205ENST00000542397 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
C12orf56-205ENST00000542397 GJA5P36382 358 aa9.1□□□□□ -0.95
C12orf56-205ENST00000542397 MYT1Q01538 1121 aa9.1□□□□□ -0.95
C12orf56-205ENST00000542397 MTMR2Q13614 643 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
C12orf56-205ENST00000542397 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
C12orf56-205ENST00000542397 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
C12orf56-205ENST00000542397 WNT7AO00755 349 aa9.08□□□□□ -0.96
C12orf56-205ENST00000542397 SPTLC1O15269 473 aa9.07□□□□□ -0.96
C12orf56-205ENST00000542397 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
C12orf56-205ENST00000542397 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
C12orf56-205ENST00000542397 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
C12orf56-205ENST00000542397 WNT7BP56706 349 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 PTPRNQ16849 979 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 PTCRAQ6ISU1 281 aaPredicted RBP9.05□□□□□ -0.96
C12orf56-205ENST00000542397 RIC3Q7Z5B4 369 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
C12orf56-205ENST00000542397 ATAD2BQ9ULI0 1458 aa9.04□□□□□ -0.96
C12orf56-205ENST00000542397 TTC24A2A3L6 582 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms