RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 ZBTB24O43167 697 aaPredicted RBP12.87□□□□□ -0.35
SRGAP1-204ENST00000542381 Q3C1V9 767 aa12.87□□□□□ -0.35
SRGAP1-204ENST00000542381 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
SRGAP1-204ENST00000542381 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
SRGAP1-204ENST00000542381 MMP16P51512 607 aa12.85□□□□□ -0.35
SRGAP1-204ENST00000542381 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
SRGAP1-204ENST00000542381 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
SRGAP1-204ENST00000542381 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
SRGAP1-204ENST00000542381 USB1Q9BQ65 265 aaKnown RBP12.84□□□□□ -0.35
SRGAP1-204ENST00000542381 AVPP01185 164 aa12.83□□□□□ -0.36
SRGAP1-204ENST00000542381 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
SRGAP1-204ENST00000542381 TRIM32Q13049 653 aa12.81□□□□□ -0.36
SRGAP1-204ENST00000542381 HOXA2O43364 376 aa12.8□□□□□ -0.36
SRGAP1-204ENST00000542381 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
SRGAP1-204ENST00000542381 GUCA2AQ02747 115 aa12.8□□□□□ -0.36
SRGAP1-204ENST00000542381 TTC24A2A3L6 582 aaPredicted RBP12.79□□□□□ -0.36
SRGAP1-204ENST00000542381 USP46P62068 366 aa12.79□□□□□ -0.36
SRGAP1-204ENST00000542381 WNT7AO00755 349 aa12.78□□□□□ -0.36
SRGAP1-204ENST00000542381 AXIN1O15169 862 aa12.78□□□□□ -0.36
SRGAP1-204ENST00000542381 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
SRGAP1-204ENST00000542381 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
SRGAP1-204ENST00000542381 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
SRGAP1-204ENST00000542381 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
SRGAP1-204ENST00000542381 MRGPRX2Q96LB1 330 aa12.76□□□□□ -0.37
SRGAP1-204ENST00000542381 SMPD1P17405 629 aa12.75□□□□□ -0.37
SRGAP1-204ENST00000542381 SNIP1Q8TAD8 396 aaKnown RBP12.75□□□□□ -0.37
SRGAP1-204ENST00000542381 GMPR2Q9P2T1 348 aaKnown RBP12.75□□□□□ -0.37
SRGAP1-204ENST00000542381 CLCN1P35523 988 aa12.74□□□□□ -0.37
SRGAP1-204ENST00000542381 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
SRGAP1-204ENST00000542381 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
SRGAP1-204ENST00000542381 REPIN1Q9BWE0 567 aaKnown RBP12.73□□□□□ -0.37
SRGAP1-204ENST00000542381 J3QL48 77 aa12.72□□□□□ -0.37
SRGAP1-204ENST00000542381 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
SRGAP1-204ENST00000542381 SKOR1P84550 965 aa12.7□□□□□ -0.38
SRGAP1-204ENST00000542381 TREML4Q6UXN2 200 aa12.7□□□□□ -0.38
SRGAP1-204ENST00000542381 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
SRGAP1-204ENST00000542381 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
SRGAP1-204ENST00000542381 JUNDP17535 347 aa12.69□□□□□ -0.38
SRGAP1-204ENST00000542381 LCE2AQ5TA79 106 aaPredicted RBP12.69□□□□□ -0.38
SRGAP1-204ENST00000542381 NUTM1Q86Y26 1132 aa12.69□□□□□ -0.38
SRGAP1-204ENST00000542381 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
SRGAP1-204ENST00000542381 HPS1Q92902 700 aa12.66□□□□□ -0.38
SRGAP1-204ENST00000542381 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
SRGAP1-204ENST00000542381 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
SRGAP1-204ENST00000542381 FDX1P10109 184 aa12.64□□□□□ -0.39
SRGAP1-204ENST00000542381 WNT7BP56706 349 aa12.64□□□□□ -0.39
SRGAP1-204ENST00000542381 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
SRGAP1-204ENST00000542381 ATP13A2Q9NQ11 1180 aa12.64□□□□□ -0.39
SRGAP1-204ENST00000542381 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
SRGAP1-204ENST00000542381 NUDT12Q9BQG2 462 aa12.62□□□□□ -0.39
SRGAP1-204ENST00000542381 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
SRGAP1-204ENST00000542381 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
SRGAP1-204ENST00000542381 SNRPBP14678 240 aaKnown RBP12.6□□□□□ -0.39
SRGAP1-204ENST00000542381 NDUFV2P19404 249 aa12.6□□□□□ -0.39
SRGAP1-204ENST00000542381 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
SRGAP1-204ENST00000542381 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
SRGAP1-204ENST00000542381 MOXD2PA6NHM9 499 aa12.57□□□□□ -0.4
SRGAP1-204ENST00000542381 WFS1O76024 890 aa12.57□□□□□ -0.4
SRGAP1-204ENST00000542381 ZMYND10O75800 440 aa12.56□□□□□ -0.4
SRGAP1-204ENST00000542381 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
SRGAP1-204ENST00000542381 SIAH2O43255 324 aa12.55□□□□□ -0.4
SRGAP1-204ENST00000542381 MS4A1P11836 297 aa12.55□□□□□ -0.4
SRGAP1-204ENST00000542381 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
SRGAP1-204ENST00000542381 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
SRGAP1-204ENST00000542381 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
SRGAP1-204ENST00000542381 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
SRGAP1-204ENST00000542381 SH3BP2P78314 561 aa12.53□□□□□ -0.4
SRGAP1-204ENST00000542381 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
SRGAP1-204ENST00000542381 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
SRGAP1-204ENST00000542381 AMHR2Q16671 573 aa12.52□□□□□ -0.41
SRGAP1-204ENST00000542381 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
SRGAP1-204ENST00000542381 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
SRGAP1-204ENST00000542381 PTPRNQ16849 979 aa12.5□□□□□ -0.41
SRGAP1-204ENST00000542381 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
SRGAP1-204ENST00000542381 BEGAINQ9BUH8 593 aa12.49□□□□□ -0.41
SRGAP1-204ENST00000542381 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
SRGAP1-204ENST00000542381 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
SRGAP1-204ENST00000542381 LCE2CQ5TA81 110 aa12.48□□□□□ -0.41
SRGAP1-204ENST00000542381 BAP1Q92560 729 aa12.48□□□□□ -0.41
SRGAP1-204ENST00000542381 MTMR2Q13614 643 aa12.47□□□□□ -0.41
SRGAP1-204ENST00000542381 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.41
SRGAP1-204ENST00000542381 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
SRGAP1-204ENST00000542381 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.41
SRGAP1-204ENST00000542381 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
SRGAP1-204ENST00000542381 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
SRGAP1-204ENST00000542381 BMP1P13497 986 aa12.44□□□□□ -0.42
SRGAP1-204ENST00000542381 CAPN5O15484 640 aaPredicted RBP12.43□□□□□ -0.42
SRGAP1-204ENST00000542381 TRIM46Q7Z4K8 759 aa12.43□□□□□ -0.42
SRGAP1-204ENST00000542381 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
SRGAP1-204ENST00000542381 PCDHB15Q9Y5E8 787 aa12.43□□□□□ -0.42
SRGAP1-204ENST00000542381 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
SRGAP1-204ENST00000542381 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
SRGAP1-204ENST00000542381 DESI1Q6ICB0 168 aa12.42□□□□□ -0.42
SRGAP1-204ENST00000542381 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
SRGAP1-204ENST00000542381 WIPF1O43516 503 aa12.41□□□□□ -0.42
SRGAP1-204ENST00000542381 ZNF511Q8NB15 262 aa12.41□□□□□ -0.42
SRGAP1-204ENST00000542381 TRIM66O15016 1216 aa12.4□□□□□ -0.42
SRGAP1-204ENST00000542381 CFAP99D6REC4 459 aa12.39□□□□□ -0.43
SRGAP1-204ENST00000542381 GJA5P36382 358 aa12.38□□□□□ -0.43
SRGAP1-204ENST00000542381 LYPD8Q6UX82 237 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms