RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
LDHA-220ENST00000542179 IQGAP1P46940 1657 aa12.94□□□□□ -0.34
LDHA-220ENST00000542179 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
LDHA-220ENST00000542179 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
LDHA-220ENST00000542179 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
LDHA-220ENST00000542179 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.94□□□□□ -0.34
LDHA-220ENST00000542179 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
LDHA-220ENST00000542179 TMEM2Q9UHN6 1383 aa12.93□□□□□ -0.34
LDHA-220ENST00000542179 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
LDHA-220ENST00000542179 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
LDHA-220ENST00000542179 POLR1AO95602 1720 aaPredicted RBP12.92□□□□□ -0.34
LDHA-220ENST00000542179 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
LDHA-220ENST00000542179 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
LDHA-220ENST00000542179 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
LDHA-220ENST00000542179 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
LDHA-220ENST00000542179 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
LDHA-220ENST00000542179 EIF3AQ14152 1382 aaKnown RBP12.9□□□□□ -0.34
LDHA-220ENST00000542179 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
LDHA-220ENST00000542179 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
LDHA-220ENST00000542179 SLIT1O75093 1534 aa12.89□□□□□ -0.35
LDHA-220ENST00000542179 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
LDHA-220ENST00000542179 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
LDHA-220ENST00000542179 PTPRMP28827 1452 aa12.89□□□□□ -0.35
LDHA-220ENST00000542179 TESK2Q96S53 571 aa12.88□□□□□ -0.35
LDHA-220ENST00000542179 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
LDHA-220ENST00000542179 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
LDHA-220ENST00000542179 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
LDHA-220ENST00000542179 CEP170BQ9Y4F5 1589 aaPredicted RBP12.87□□□□□ -0.35
LDHA-220ENST00000542179 DDX10Q13206 875 aaKnown RBP12.87□□□□□ -0.35
LDHA-220ENST00000542179 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
LDHA-220ENST00000542179 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
LDHA-220ENST00000542179 SBNO2Q9Y2G9 1366 aa12.85□□□□□ -0.35
LDHA-220ENST00000542179 NRXN3Q9Y4C0 1643 aa12.85□□□□□ -0.35
LDHA-220ENST00000542179 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
LDHA-220ENST00000542179 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
LDHA-220ENST00000542179 TMF1P82094 1093 aa12.84□□□□□ -0.35
LDHA-220ENST00000542179 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
LDHA-220ENST00000542179 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
LDHA-220ENST00000542179 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
LDHA-220ENST00000542179 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
LDHA-220ENST00000542179 LTKP29376 864 aa12.83□□□□□ -0.36
LDHA-220ENST00000542179 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
LDHA-220ENST00000542179 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
LDHA-220ENST00000542179 MED14O60244 1454 aa12.81□□□□□ -0.36
LDHA-220ENST00000542179 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
LDHA-220ENST00000542179 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
LDHA-220ENST00000542179 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
LDHA-220ENST00000542179 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
LDHA-220ENST00000542179 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 ARHGEF28Q8N1W1 1705 aaKnown RBP12.8□□□□□ -0.36
LDHA-220ENST00000542179 DLC1Q96QB1 1528 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
LDHA-220ENST00000542179 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
LDHA-220ENST00000542179 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
LDHA-220ENST00000542179 PUS7Q96PZ0 661 aaKnown RBP12.78□□□□□ -0.36
LDHA-220ENST00000542179 METP08581 1390 aa12.78□□□□□ -0.36
LDHA-220ENST00000542179 TECPR2O15040 1411 aa12.78□□□□□ -0.36
LDHA-220ENST00000542179 QRICH2Q9H0J4 1663 aa12.77□□□□□ -0.36
LDHA-220ENST00000542179 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
LDHA-220ENST00000542179 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
LDHA-220ENST00000542179 BCANQ96GW7 911 aa12.76□□□□□ -0.37
LDHA-220ENST00000542179 FAM135BQ49AJ0 1406 aa12.75□□□□□ -0.37
LDHA-220ENST00000542179 STK26Q9P289 416 aa12.75□□□□□ -0.37
LDHA-220ENST00000542179 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
LDHA-220ENST00000542179 CPS1P31327 1500 aa12.73□□□□□ -0.37
LDHA-220ENST00000542179 ANP32CO43423 234 aa12.73□□□□□ -0.37
LDHA-220ENST00000542179 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
LDHA-220ENST00000542179 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
LDHA-220ENST00000542179 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
LDHA-220ENST00000542179 POGKQ9P215 609 aa12.73□□□□□ -0.37
LDHA-220ENST00000542179 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
LDHA-220ENST00000542179 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
LDHA-220ENST00000542179 PER1O15534 1290 aaPredicted RBP12.7□□□□□ -0.38
LDHA-220ENST00000542179 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
LDHA-220ENST00000542179 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
LDHA-220ENST00000542179 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
LDHA-220ENST00000542179 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
LDHA-220ENST00000542179 PTPRUQ92729 1446 aa12.7□□□□□ -0.38
LDHA-220ENST00000542179 CCER2I3L3R5 266 aa12.69□□□□□ -0.38
LDHA-220ENST00000542179 MYOM1P52179 1685 aa12.69□□□□□ -0.38
LDHA-220ENST00000542179 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
LDHA-220ENST00000542179 PTCH1Q13635 1447 aa12.69□□□□□ -0.38
LDHA-220ENST00000542179 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
LDHA-220ENST00000542179 PANK3Q9H999 370 aa12.68□□□□□ -0.38
LDHA-220ENST00000542179 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
LDHA-220ENST00000542179 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
LDHA-220ENST00000542179 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
LDHA-220ENST00000542179 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
LDHA-220ENST00000542179 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
LDHA-220ENST00000542179 KTN1Q86UP2 1357 aaKnown RBP12.67□□□□□ -0.38
LDHA-220ENST00000542179 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
LDHA-220ENST00000542179 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
LDHA-220ENST00000542179 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
LDHA-220ENST00000542179 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
LDHA-220ENST00000542179 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
LDHA-220ENST00000542179 NUBP1P53384 320 aa12.65□□□□□ -0.38
LDHA-220ENST00000542179 CDK19Q9BWU1 502 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms