RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 PLEKHH1Q9ULM0 1364 aa23.69■■□□□ 1.38
GABARAPL1-210ENST00000541960 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
GABARAPL1-210ENST00000541960 NEFLP07196 543 aa23.69■■□□□ 1.38
GABARAPL1-210ENST00000541960 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
GABARAPL1-210ENST00000541960 NLRP1Q9C000 1473 aa23.68■■□□□ 1.38
GABARAPL1-210ENST00000541960 ANKRD36BQ8N2N9 1353 aa23.68■■□□□ 1.38
GABARAPL1-210ENST00000541960 SRPK2P78362 688 aaKnown RBP23.68■■□□□ 1.38
GABARAPL1-210ENST00000541960 ABCC11Q96J66 1382 aa23.67■■□□□ 1.38
GABARAPL1-210ENST00000541960 BCANQ96GW7 911 aa23.67■■□□□ 1.38
GABARAPL1-210ENST00000541960 INSRP06213 1382 aa23.67■■□□□ 1.38
GABARAPL1-210ENST00000541960 PLPPR3Q6T4P5 718 aa23.67■■□□□ 1.38
GABARAPL1-210ENST00000541960 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
GABARAPL1-210ENST00000541960 ADAMTS8Q9UP79 889 aa23.66■■□□□ 1.38
GABARAPL1-210ENST00000541960 LTKP29376 864 aa23.65■■□□□ 1.38
GABARAPL1-210ENST00000541960 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
GABARAPL1-210ENST00000541960 NUDCQ9Y266 331 aa23.63■■□□□ 1.37
GABARAPL1-210ENST00000541960 CDK19Q9BWU1 502 aa23.63■■□□□ 1.37
GABARAPL1-210ENST00000541960 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
GABARAPL1-210ENST00000541960 A0A1W2PP64 1363 aa23.63■■□□□ 1.37
GABARAPL1-210ENST00000541960 ATAD2Q6PL18 1390 aa23.62■■□□□ 1.37
GABARAPL1-210ENST00000541960 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
GABARAPL1-210ENST00000541960 DNAJC5Q9H3Z4 198 aa23.62■■□□□ 1.37
GABARAPL1-210ENST00000541960 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
GABARAPL1-210ENST00000541960 IRX6P78412 446 aaPredicted RBP23.61■■□□□ 1.37
GABARAPL1-210ENST00000541960 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
GABARAPL1-210ENST00000541960 CGNL1Q0VF96 1302 aa23.6■■□□□ 1.37
GABARAPL1-210ENST00000541960 TXNDC2Q86VQ3 553 aa23.59■■□□□ 1.37
GABARAPL1-210ENST00000541960 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
GABARAPL1-210ENST00000541960 TECPR2O15040 1411 aa23.58■■□□□ 1.37
GABARAPL1-210ENST00000541960 WDR43Q15061 677 aaKnown RBP eCLIP23.58■■□□□ 1.37
GABARAPL1-210ENST00000541960 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.36
GABARAPL1-210ENST00000541960 PLEKHG1Q9ULL1 1385 aa23.58■■□□□ 1.36
GABARAPL1-210ENST00000541960 TNNT2P45379 298 aaPredicted RBP23.57■■□□□ 1.36
GABARAPL1-210ENST00000541960 ARHGAP23Q9P227 1491 aa23.56■■□□□ 1.36
GABARAPL1-210ENST00000541960 SLIT1O75093 1534 aa23.55■■□□□ 1.36
GABARAPL1-210ENST00000541960 CPS1P31327 1500 aa23.55■■□□□ 1.36
GABARAPL1-210ENST00000541960 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
GABARAPL1-210ENST00000541960 CABP1Q9NZU7 370 aa23.54■■□□□ 1.36
GABARAPL1-210ENST00000541960 MED14O60244 1454 aa23.53■■□□□ 1.36
GABARAPL1-210ENST00000541960 POLR3AO14802 1390 aaPredicted RBP23.53■■□□□ 1.36
GABARAPL1-210ENST00000541960 NSD2O96028 1365 aa23.53■■□□□ 1.36
GABARAPL1-210ENST00000541960 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
GABARAPL1-210ENST00000541960 SIRT1Q96EB6 747 aa23.52■■□□□ 1.35
GABARAPL1-210ENST00000541960 CDCA7LQ96GN5 454 aa23.51■■□□□ 1.35
GABARAPL1-210ENST00000541960 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
GABARAPL1-210ENST00000541960 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
GABARAPL1-210ENST00000541960 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
GABARAPL1-210ENST00000541960 RIMS1Q86UR5 1692 aaKnown RBP23.49■■□□□ 1.35
GABARAPL1-210ENST00000541960 EID1Q9Y6B2 187 aa23.49■■□□□ 1.35
GABARAPL1-210ENST00000541960 PTPRUQ92729 1446 aa23.49■■□□□ 1.35
GABARAPL1-210ENST00000541960 SHPRHQ149N8 1683 aa23.48■■□□□ 1.35
GABARAPL1-210ENST00000541960 PDE3BQ13370 1112 aa23.48■■□□□ 1.35
GABARAPL1-210ENST00000541960 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
GABARAPL1-210ENST00000541960 RNF123Q5XPI4 1314 aa23.48■■□□□ 1.35
GABARAPL1-210ENST00000541960 GGNBP2Q9H3C7 697 aa23.48■■□□□ 1.35
GABARAPL1-210ENST00000541960 FYB1O15117 783 aa23.47■■□□□ 1.35
GABARAPL1-210ENST00000541960 MTHFSP49914 203 aa23.47■■□□□ 1.35
GABARAPL1-210ENST00000541960 THEMISQ8N1K5 641 aaPredicted RBP23.46■■□□□ 1.35
GABARAPL1-210ENST00000541960 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
GABARAPL1-210ENST00000541960 ATP7BP35670 1465 aa23.44■■□□□ 1.34
GABARAPL1-210ENST00000541960 NCKAP5LQ9HCH0 1330 aa23.44■■□□□ 1.34
GABARAPL1-210ENST00000541960 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
GABARAPL1-210ENST00000541960 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
GABARAPL1-210ENST00000541960 ZNF521Q96K83 1311 aa23.43■■□□□ 1.34
GABARAPL1-210ENST00000541960 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
GABARAPL1-210ENST00000541960 ADAMTSL3P82987 1691 aa23.42■■□□□ 1.34
GABARAPL1-210ENST00000541960 ANKRD26Q9UPS8 1709 aa23.42■■□□□ 1.34
GABARAPL1-210ENST00000541960 NUDT16Q96DE0 195 aaKnown RBP23.41■■□□□ 1.34
GABARAPL1-210ENST00000541960 CPSF1Q10570 1443 aaKnown RBP23.41■■□□□ 1.34
GABARAPL1-210ENST00000541960 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
GABARAPL1-210ENST00000541960 PRR36Q9H6K5 1346 aa23.4■■□□□ 1.34
GABARAPL1-210ENST00000541960 APAF1O14727 1248 aa23.39■■□□□ 1.34
GABARAPL1-210ENST00000541960 ERICH6BQ5W0A0 696 aa23.39■■□□□ 1.33
GABARAPL1-210ENST00000541960 KIF20BQ96Q89 1820 aa23.39■■□□□ 1.33
GABARAPL1-210ENST00000541960 ADGRB2O60241 1585 aa23.39■■□□□ 1.33
GABARAPL1-210ENST00000541960 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
GABARAPL1-210ENST00000541960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.37■■□□□ 1.33
GABARAPL1-210ENST00000541960 CCDC61Q9Y6R9 512 aa23.36■■□□□ 1.33
GABARAPL1-210ENST00000541960 RCAN3Q9UKA8 241 aa23.36■■□□□ 1.33
GABARAPL1-210ENST00000541960 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
GABARAPL1-210ENST00000541960 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
GABARAPL1-210ENST00000541960 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
GABARAPL1-210ENST00000541960 COL3A1P02461 1466 aaPredicted RBP23.33■■□□□ 1.33
GABARAPL1-210ENST00000541960 PTCH1Q13635 1447 aa23.33■■□□□ 1.33
GABARAPL1-210ENST00000541960 EDC4Q6P2E9 1401 aaKnown RBP23.33■■□□□ 1.33
GABARAPL1-210ENST00000541960 PPP4R2Q9NY27 417 aa23.32■■□□□ 1.32
GABARAPL1-210ENST00000541960 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
GABARAPL1-210ENST00000541960 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
GABARAPL1-210ENST00000541960 MON2Q7Z3U7 1717 aa23.31■■□□□ 1.32
GABARAPL1-210ENST00000541960 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 FBLN1P23142 703 aa23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 RRP1P56182 461 aaKnown RBP23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 IQSEC2Q5JU85 1478 aa23.3■■□□□ 1.32
GABARAPL1-210ENST00000541960 TOPAZ1Q8N9V7 1692 aa23.29■■□□□ 1.32
GABARAPL1-210ENST00000541960 AKAP12Q02952 1782 aa23.29■■□□□ 1.32
GABARAPL1-210ENST00000541960 NUTM2FA1L443 756 aa23.29■■□□□ 1.32
GABARAPL1-210ENST00000541960 NME9Q86XW9 330 aa23.29■■□□□ 1.32
GABARAPL1-210ENST00000541960 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms