RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
C12orf56-204ENST00000541802 CSPP1Q1MSJ5 1256 aa12.04□□□□□ -0.48
C12orf56-204ENST00000541802 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
C12orf56-204ENST00000541802 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
C12orf56-204ENST00000541802 SPTLC1O15269 473 aa12.03□□□□□ -0.48
C12orf56-204ENST00000541802 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
C12orf56-204ENST00000541802 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
C12orf56-204ENST00000541802 FDX1P10109 184 aa12.01□□□□□ -0.49
C12orf56-204ENST00000541802 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
C12orf56-204ENST00000541802 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
C12orf56-204ENST00000541802 GJA5P36382 358 aa11.99□□□□□ -0.49
C12orf56-204ENST00000541802 MORN1Q5T089 497 aa11.99□□□□□ -0.49
C12orf56-204ENST00000541802 ZNF516Q92618 1163 aa11.99□□□□□ -0.49
C12orf56-204ENST00000541802 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
C12orf56-204ENST00000541802 SLC27A5Q9Y2P5 690 aa11.98□□□□□ -0.49
C12orf56-204ENST00000541802 QPCTQ16769 361 aa11.97□□□□□ -0.49
C12orf56-204ENST00000541802 BLOC1S3Q6QNY0 202 aa11.97□□□□□ -0.49
C12orf56-204ENST00000541802 COPS2P61201 443 aa11.96□□□□□ -0.49
C12orf56-204ENST00000541802 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
C12orf56-204ENST00000541802 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.49
C12orf56-204ENST00000541802 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
C12orf56-204ENST00000541802 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
C12orf56-204ENST00000541802 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
C12orf56-204ENST00000541802 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
C12orf56-204ENST00000541802 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
C12orf56-204ENST00000541802 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
C12orf56-204ENST00000541802 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
C12orf56-204ENST00000541802 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
C12orf56-204ENST00000541802 LILRB3O75022 631 aa11.93□□□□□ -0.5
C12orf56-204ENST00000541802 NR1I2O75469 434 aa11.93□□□□□ -0.5
C12orf56-204ENST00000541802 HRCP23327 699 aa11.93□□□□□ -0.5
C12orf56-204ENST00000541802 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
C12orf56-204ENST00000541802 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
C12orf56-204ENST00000541802 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
C12orf56-204ENST00000541802 GGCXP38435 758 aa11.91□□□□□ -0.5
C12orf56-204ENST00000541802 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
C12orf56-204ENST00000541802 MTMR2Q13614 643 aa11.9□□□□□ -0.5
C12orf56-204ENST00000541802 Q3C1V9 767 aa11.9□□□□□ -0.5
C12orf56-204ENST00000541802 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
C12orf56-204ENST00000541802 RFC5P40937 340 aa11.89□□□□□ -0.51
C12orf56-204ENST00000541802 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
C12orf56-204ENST00000541802 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
C12orf56-204ENST00000541802 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
C12orf56-204ENST00000541802 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
C12orf56-204ENST00000541802 ZPR1O75312 459 aa11.85□□□□□ -0.51
C12orf56-204ENST00000541802 TSC1Q92574 1164 aa11.85□□□□□ -0.51
C12orf56-204ENST00000541802 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
C12orf56-204ENST00000541802 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
C12orf56-204ENST00000541802 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
C12orf56-204ENST00000541802 TLL1O43897 1013 aa11.84□□□□□ -0.51
C12orf56-204ENST00000541802 RETREG3Q86VR2 466 aa11.84□□□□□ -0.51
C12orf56-204ENST00000541802 PRR7Q8TB68 274 aa11.84□□□□□ -0.51
C12orf56-204ENST00000541802 AP1G2O75843 785 aa11.83□□□□□ -0.52
C12orf56-204ENST00000541802 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
C12orf56-204ENST00000541802 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
C12orf56-204ENST00000541802 SPSB2Q99619 263 aa11.83□□□□□ -0.52
C12orf56-204ENST00000541802 USB1Q9BQ65 265 aaKnown RBP11.83□□□□□ -0.52
C12orf56-204ENST00000541802 MYT1Q01538 1121 aa11.82□□□□□ -0.52
C12orf56-204ENST00000541802 TMEM259Q4ZIN3 620 aa11.81□□□□□ -0.52
C12orf56-204ENST00000541802 POTECB2RU33 542 aa11.8□□□□□ -0.52
C12orf56-204ENST00000541802 DGAT1O75907 488 aa11.8□□□□□ -0.52
C12orf56-204ENST00000541802 CTDSPL2Q05D32 466 aa11.79□□□□□ -0.52
C12orf56-204ENST00000541802 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
C12orf56-204ENST00000541802 SLC19A1P41440 591 aa11.78□□□□□ -0.52
C12orf56-204ENST00000541802 HELBQ8NG08 1087 aaPredicted RBP11.78□□□□□ -0.52
C12orf56-204ENST00000541802 ADH1BP00325 375 aa11.77□□□□□ -0.53
C12orf56-204ENST00000541802 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
C12orf56-204ENST00000541802 PRDM9Q9NQV7 894 aa11.76□□□□□ -0.53
C12orf56-204ENST00000541802 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
C12orf56-204ENST00000541802 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
C12orf56-204ENST00000541802 PER1O15534 1290 aaPredicted RBP11.74□□□□□ -0.53
C12orf56-204ENST00000541802 FLIIQ13045 1269 aa11.74□□□□□ -0.53
C12orf56-204ENST00000541802 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
C12orf56-204ENST00000541802 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
C12orf56-204ENST00000541802 RNF223E7ERA6 249 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 PRR20EP86478 221 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 PRR20CP86479 221 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 PRR20DP86480 221 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 PRR20BP86481 221 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 PRR20AP86496 221 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 MCM6Q14566 821 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 LRRN4Q8WUT4 740 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 SLC6A16Q9GZN6 736 aa11.73□□□□□ -0.53
C12orf56-204ENST00000541802 JUNDP17535 347 aa11.72□□□□□ -0.53
C12orf56-204ENST00000541802 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
C12orf56-204ENST00000541802 DESI1Q6ICB0 168 aa11.72□□□□□ -0.53
C12orf56-204ENST00000541802 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
C12orf56-204ENST00000541802 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
C12orf56-204ENST00000541802 S1PR4O95977 384 aa11.7□□□□□ -0.54
C12orf56-204ENST00000541802 LYPD8Q6UX82 237 aa11.7□□□□□ -0.54
C12orf56-204ENST00000541802 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
C12orf56-204ENST00000541802 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
C12orf56-204ENST00000541802 LCE2AQ5TA79 106 aaPredicted RBP11.69□□□□□ -0.54
C12orf56-204ENST00000541802 MTMR14Q8NCE2 650 aa11.69□□□□□ -0.54
C12orf56-204ENST00000541802 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
C12orf56-204ENST00000541802 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
C12orf56-204ENST00000541802 MMP16P51512 607 aa11.68□□□□□ -0.54
C12orf56-204ENST00000541802 PTPRNQ16849 979 aa11.66□□□□□ -0.54
C12orf56-204ENST00000541802 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms