RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 CNGB1Q14028 1251 aaPredicted RBP24.17■■□□□ 1.46
RAB6A-208ENST00000541795 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
RAB6A-208ENST00000541795 PTPRUQ92729 1446 aa24.16■■□□□ 1.46
RAB6A-208ENST00000541795 KTN1Q86UP2 1357 aaKnown RBP24.15■■□□□ 1.46
RAB6A-208ENST00000541795 CABP2Q9NPB3 220 aa24.14■■□□□ 1.45
RAB6A-208ENST00000541795 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
RAB6A-208ENST00000541795 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
RAB6A-208ENST00000541795 TMC1Q8TDI8 760 aa24.12■■□□□ 1.45
RAB6A-208ENST00000541795 KNSTRNQ9Y448 316 aa24.12■■□□□ 1.45
RAB6A-208ENST00000541795 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
RAB6A-208ENST00000541795 RALBP1Q15311 655 aa24.11■■□□□ 1.45
RAB6A-208ENST00000541795 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
RAB6A-208ENST00000541795 KDM4FA0A1W2PPD8 638 aa24.1■■□□□ 1.45
RAB6A-208ENST00000541795 PIK3R4Q99570 1358 aa24.1■■□□□ 1.45
RAB6A-208ENST00000541795 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 SLC12A5Q9H2X9 1139 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
RAB6A-208ENST00000541795 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.45
RAB6A-208ENST00000541795 CC2D1BQ5T0F9 858 aaKnown RBP24.07■■□□□ 1.44
RAB6A-208ENST00000541795 ADGRB2O60241 1585 aa24.06■■□□□ 1.44
RAB6A-208ENST00000541795 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
RAB6A-208ENST00000541795 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
RAB6A-208ENST00000541795 AMER1Q5JTC6 1135 aaPredicted RBP24.05■■□□□ 1.44
RAB6A-208ENST00000541795 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
RAB6A-208ENST00000541795 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
RAB6A-208ENST00000541795 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
RAB6A-208ENST00000541795 ANKRD36BQ8N2N9 1353 aa24.04■■□□□ 1.44
RAB6A-208ENST00000541795 NPC1L1Q9UHC9 1359 aa24.04■■□□□ 1.44
RAB6A-208ENST00000541795 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
RAB6A-208ENST00000541795 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
RAB6A-208ENST00000541795 NSD3Q9BZ95 1437 aa24.02■■□□□ 1.44
RAB6A-208ENST00000541795 NCKAP5LQ9HCH0 1330 aa24.02■■□□□ 1.44
RAB6A-208ENST00000541795 USP32Q8NFA0 1604 aa24.01■■□□□ 1.43
RAB6A-208ENST00000541795 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
RAB6A-208ENST00000541795 KCNA6P17658 529 aa23.98■■□□□ 1.43
RAB6A-208ENST00000541795 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
RAB6A-208ENST00000541795 BRD4O60885 1362 aaPredicted RBP23.98■■□□□ 1.43
RAB6A-208ENST00000541795 NLRP13Q86W25 1043 aa23.96■■□□□ 1.43
RAB6A-208ENST00000541795 CD163L1Q9NR16 1453 aa23.96■■□□□ 1.43
RAB6A-208ENST00000541795 TERF2IPQ9NYB0 399 aa23.96■■□□□ 1.43
RAB6A-208ENST00000541795 ATP7BP35670 1465 aa23.95■■□□□ 1.42
RAB6A-208ENST00000541795 CABP1Q9NZU7 370 aa23.94■■□□□ 1.42
RAB6A-208ENST00000541795 LMTK3Q96Q04 1460 aa23.93■■□□□ 1.42
RAB6A-208ENST00000541795 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
RAB6A-208ENST00000541795 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
RAB6A-208ENST00000541795 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
RAB6A-208ENST00000541795 CGNL1Q0VF96 1302 aa23.92■■□□□ 1.42
RAB6A-208ENST00000541795 NWD1Q149M9 1564 aa23.92■■□□□ 1.42
RAB6A-208ENST00000541795 TOPAZ1Q8N9V7 1692 aa23.91■■□□□ 1.42
RAB6A-208ENST00000541795 HSPA2P54652 639 aa23.91■■□□□ 1.42
RAB6A-208ENST00000541795 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
RAB6A-208ENST00000541795 CCDC61Q9Y6R9 512 aa23.89■■□□□ 1.42
RAB6A-208ENST00000541795 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.42
RAB6A-208ENST00000541795 CDC42BPGQ6DT37 1551 aa23.89■■□□□ 1.41
RAB6A-208ENST00000541795 NSD2O96028 1365 aa23.89■■□□□ 1.41
RAB6A-208ENST00000541795 ITSN1Q15811 1721 aa23.88■■□□□ 1.41
RAB6A-208ENST00000541795 NALCNQ8IZF0 1738 aa23.88■■□□□ 1.41
RAB6A-208ENST00000541795 PPP2R1AP30153 589 aa23.87■■□□□ 1.41
RAB6A-208ENST00000541795 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
RAB6A-208ENST00000541795 CPSF1Q10570 1443 aaKnown RBP23.85■■□□□ 1.41
RAB6A-208ENST00000541795 KIF20BQ96Q89 1820 aa23.85■■□□□ 1.41
RAB6A-208ENST00000541795 MON2Q7Z3U7 1717 aa23.85■■□□□ 1.41
RAB6A-208ENST00000541795 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
RAB6A-208ENST00000541795 ANKRD26Q9UPS8 1709 aa23.85■■□□□ 1.41
RAB6A-208ENST00000541795 PNISRQ8TF01 805 aaKnown RBP23.84■■□□□ 1.41
RAB6A-208ENST00000541795 MORC1Q86VD1 984 aa23.83■■□□□ 1.41
RAB6A-208ENST00000541795 STRCQ7RTU9 1775 aa23.83■■□□□ 1.4
RAB6A-208ENST00000541795 NUTM2FA1L443 756 aa23.82■■□□□ 1.4
RAB6A-208ENST00000541795 RGPD8O14715 1765 aaPredicted RBP23.82■■□□□ 1.4
RAB6A-208ENST00000541795 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
RAB6A-208ENST00000541795 EDC4Q6P2E9 1401 aaKnown RBP23.8■■□□□ 1.4
RAB6A-208ENST00000541795 ADGRL3Q9HAR2 1447 aa23.8■■□□□ 1.4
RAB6A-208ENST00000541795 ANKARQ7Z5J8 1434 aa23.8■■□□□ 1.4
RAB6A-208ENST00000541795 HNRNPUQ00839 825 aaKnown RBP eCLIP23.8■■□□□ 1.4
RAB6A-208ENST00000541795 PLEKHG3A1L390 1219 aa23.77■■□□□ 1.4
RAB6A-208ENST00000541795 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
RAB6A-208ENST00000541795 FYB1O15117 783 aa23.77■■□□□ 1.4
RAB6A-208ENST00000541795 STRCP1A6NGW2 1772 aa23.77■■□□□ 1.4
RAB6A-208ENST00000541795 ZNF692Q9BU19 519 aaPredicted RBP23.76■■□□□ 1.39
RAB6A-208ENST00000541795 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
RAB6A-208ENST00000541795 NRKQ7Z2Y5 1582 aa23.75■■□□□ 1.39
RAB6A-208ENST00000541795 ACEP12821 1306 aa23.75■■□□□ 1.39
RAB6A-208ENST00000541795 TNNT2P45379 298 aaPredicted RBP23.75■■□□□ 1.39
RAB6A-208ENST00000541795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.75■■□□□ 1.39
RAB6A-208ENST00000541795 C14orf37Q86TY3 774 aa23.73■■□□□ 1.39
RAB6A-208ENST00000541795 PROSER2Q86WR7 435 aaPredicted RBP23.73■■□□□ 1.39
RAB6A-208ENST00000541795 USP6P35125 1406 aa23.71■■□□□ 1.39
RAB6A-208ENST00000541795 PMFBP1Q8TBY8 1022 aa23.7■■□□□ 1.38
RAB6A-208ENST00000541795 POLR3AO14802 1390 aaPredicted RBP23.7■■□□□ 1.38
RAB6A-208ENST00000541795 NME9Q86XW9 330 aa23.67■■□□□ 1.38
RAB6A-208ENST00000541795 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
RAB6A-208ENST00000541795 INSRP06213 1382 aa23.66■■□□□ 1.38
RAB6A-208ENST00000541795 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
RAB6A-208ENST00000541795 TTC21BQ7Z4L5 1316 aa23.66■■□□□ 1.38
RAB6A-208ENST00000541795 MTHFSP49914 203 aa23.65■■□□□ 1.38
RAB6A-208ENST00000541795 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
RAB6A-208ENST00000541795 ZBED9Q6R2W3 1325 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms