RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SEPT11Q9NVA2 429 aaKnown RBP7.66□□□□□ -1.18
DMD-228ENST00000541735 NGLY1Q96IV0 654 aa7.66□□□□□ -1.18
DMD-228ENST00000541735 SAFBQ15424 915 aaKnown RBP eCLIP7.66□□□□□ -1.18
DMD-228ENST00000541735 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
DMD-228ENST00000541735 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
DMD-228ENST00000541735 EP400NLQ6ZTU2 488 aa7.65□□□□□ -1.18
DMD-228ENST00000541735 SIL1Q9H173 461 aa7.65□□□□□ -1.18
DMD-228ENST00000541735 CABP4P57796 275 aa7.65□□□□□ -1.19
DMD-228ENST00000541735 SLC4A8Q2Y0W8 1093 aa7.65□□□□□ -1.19
DMD-228ENST00000541735 CUX2O14529 1486 aa7.65□□□□□ -1.19
DMD-228ENST00000541735 ZNF76P36508 570 aa7.65□□□□□ -1.19
DMD-228ENST00000541735 DRC1Q96MC2 740 aa7.65□□□□□ -1.19
DMD-228ENST00000541735 TTC39AQ5SRH9 613 aa7.64□□□□□ -1.19
DMD-228ENST00000541735 BRMS1Q9HCU9 246 aa7.64□□□□□ -1.19
DMD-228ENST00000541735 RFX1P22670 979 aa7.64□□□□□ -1.19
DMD-228ENST00000541735 SSR1P43307 286 aaKnown RBP7.64□□□□□ -1.19
DMD-228ENST00000541735 TXNDC2Q86VQ3 553 aa7.64□□□□□ -1.19
DMD-228ENST00000541735 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
DMD-228ENST00000541735 ZKSCAN1P17029 563 aaPredicted RBP7.63□□□□□ -1.19
DMD-228ENST00000541735 HSP90AB4PQ58FF6 505 aa7.63□□□□□ -1.19
DMD-228ENST00000541735 TBC1D2BQ9UPU7 963 aa7.63□□□□□ -1.19
DMD-228ENST00000541735 CEBPZQ03701 1054 aaKnown RBP7.63□□□□□ -1.19
DMD-228ENST00000541735 NUP133Q8WUM0 1156 aa7.63□□□□□ -1.19
DMD-228ENST00000541735 ZC3H6P61129 1189 aaKnown RBP7.63□□□□□ -1.19
DMD-228ENST00000541735 RIPK4P57078 832 aa7.63□□□□□ -1.19
DMD-228ENST00000541735 CABP2Q9NPB3 220 aa7.63□□□□□ -1.19
DMD-228ENST00000541735 MAP3K9P80192 1104 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 SETQ01105 290 aaPredicted RBP7.62□□□□□ -1.19
DMD-228ENST00000541735 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.192e-6■■■□□ 17.4
DMD-228ENST00000541735 PLCD4Q9BRC7 762 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 PRDM11Q9NQV5 511 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 CECR2Q9BXF3 1484 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 MPHOSPH9Q99550 1183 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 ZMYND15Q9H091 742 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 TMEM132EQ6IEE7 984 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 MPHOSPH8Q99549 860 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 EVC2Q86UK5 1308 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 MAP4K4O95819 1239 aaPredicted RBP7.62□□□□□ -1.19
DMD-228ENST00000541735 PANK3Q9H999 370 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 CAGE1Q8TC20 777 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 RUFY2Q8WXA3 655 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 TANGO6Q9C0B7 1094 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 TMOD2Q9NZR1 351 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 CARMIL1Q5VZK9 1371 aa7.62□□□□□ -1.19
DMD-228ENST00000541735 SLC3A2P08195 630 aaKnown RBP7.61□□□□□ -1.19
DMD-228ENST00000541735 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
DMD-228ENST00000541735 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 ANKIB1Q9P2G1 1089 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 RUFY1Q96T51 708 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 GPRASP1Q5JY77 1395 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 ZPR1O75312 459 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 HOOK1Q9UJC3 728 aaKnown RBP7.61□□□□□ -1.19
DMD-228ENST00000541735 CEP162Q5TB80 1403 aa7.61□□□□□ -1.19
DMD-228ENST00000541735 DIAPH1O60610 1272 aaKnown RBP7.6□□□□□ -1.19
DMD-228ENST00000541735 CRACR2BQ8N4Y2 399 aaPredicted RBP7.6□□□□□ -1.19
DMD-228ENST00000541735 FSD1Q9BTV5 496 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 TATP17735 454 aaPredicted RBP7.6□□□□□ -1.19
DMD-228ENST00000541735 CBX1P83916 185 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 GOLGA3Q08378 1498 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 ZNF408Q9H9D4 720 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
DMD-228ENST00000541735 FKBP4Q02790 459 aaKnown RBP eCLIP7.6□□□□□ -1.19
DMD-228ENST00000541735 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 RAI14Q9P0K7 980 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 XBP1P17861 261 aa7.6□□□□□ -1.19
DMD-228ENST00000541735 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
DMD-228ENST00000541735 PTCD1O75127 700 aaKnown RBP7.59□□□□□ -1.19
DMD-228ENST00000541735 SLC26A8Q96RN1 970 aa7.59□□□□□ -1.19
DMD-228ENST00000541735 WRNQ14191 1432 aaPredicted RBP eCLIP7.59□□□□□ -1.19
DMD-228ENST00000541735 ABCF2Q9UG63 623 aa7.59□□□□□ -1.19
DMD-228ENST00000541735 CGNL1Q0VF96 1302 aa7.59□□□□□ -1.19
DMD-228ENST00000541735 STK3Q13188 491 aa7.59□□□□□ -1.19
DMD-228ENST00000541735 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
DMD-228ENST00000541735 GOLGA6L3A6NEY3 463 aa7.59□□□□□ -1.2
DMD-228ENST00000541735 COMMD10Q9Y6G5 202 aa7.59□□□□□ -1.2
DMD-228ENST00000541735 ANKRD30AQ9BXX3 1397 aa7.58□□□□□ -1.2
DMD-228ENST00000541735 RNF20Q5VTR2 975 aa7.58□□□□□ -1.2
DMD-228ENST00000541735 HMGN5P82970 282 aaKnown RBP7.58□□□□□ -1.2
DMD-228ENST00000541735 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
DMD-228ENST00000541735 CCDC173Q0VFZ6 552 aa7.58□□□□□ -1.2
DMD-228ENST00000541735 CIZ1Q9ULV3 898 aaPredicted RBP7.58□□□□□ -1.2
DMD-228ENST00000541735 KCNA4P22459 653 aa7.58□□□□□ -1.2
DMD-228ENST00000541735 RDXP35241 583 aaKnown RBP7.58□□□□□ -1.2
DMD-228ENST00000541735 UBTFL1P0CB47 393 aaPredicted RBP7.57□□□□□ -1.2
DMD-228ENST00000541735 ATXN8OSP0DMR3 200 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 SEPT7Q16181 437 aaKnown RBP7.57□□□□□ -1.2
DMD-228ENST00000541735 SOGA3Q5TF21 947 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 CCDC181Q5TID7 509 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 MPRIPQ6WCQ1 1025 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 ZNF354CQ86Y25 554 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 DHX8Q14562 1220 aaKnown RBP7.57□□□□□ -1.2
DMD-228ENST00000541735 RB1CC1Q8TDY2 1594 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 UBAP1LF5GYI3 381 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 ERC1Q8IUD2 1116 aa7.57□□□□□ -1.2
DMD-228ENST00000541735 ENOX2Q16206 610 aaKnown RBP7.56□□□□□ -1.2
DMD-228ENST00000541735 MAGEC2Q9UBF1 373 aaPredicted RBP7.56□□□□□ -1.2
DMD-228ENST00000541735 CCDC158Q5M9N0 1113 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms