RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.371e-323■■■■□ 19.6
SNHG1-218ENST00000541615 SMC4Q9NTJ3 1288 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 CGNQ9P2M7 1197 aaKnown RBP6.47□□□□□ -1.37
SNHG1-218ENST00000541615 RNF123Q5XPI4 1314 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 PLEKHD1A6NEE1 506 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 TULP2O00295 520 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 KIF3CO14782 793 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 FRAT2O75474 233 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-218ENST00000541615 PPP1R15AO75807 674 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-218ENST00000541615 HSP90AB4PQ58FF6 505 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 SASS6Q6UVJ0 657 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 RPAINQ86UA6 219 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 MFRPQ9BY79 579 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 PRDM16Q9HAZ2 1276 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 SH3BP1Q9Y3L3 701 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 STK24Q9Y6E0 443 aa6.46□□□□□ -1.38
SNHG1-218ENST00000541615 ZBTB7CA1YPR0 619 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 ZNF500O60304 480 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-218ENST00000541615 PTGER2P43116 358 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 KCNJ4P48050 445 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 BRPF1P55201 1214 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-218ENST00000541615 TRDNQ13061 729 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 KCNH8Q96L42 1107 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 PRIMPOLQ96LW4 560 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 SLC26A8Q96RN1 970 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 MRVI1Q9Y6F6 885 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 RAD50Q92878 1312 aa6.45□□□□□ -1.38
SNHG1-218ENST00000541615 UQCRHLA0A096LP55 91 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 GOLGA6L6A8MZA4 724 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 GOLGA6L22H0YM25 854 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 STK25O00506 426 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 UQCRHP07919 91 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 LIG1P18858 919 aa6.44□□□□□ -1.38
SNHG1-218ENST00000541615 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-218ENST00000541615 ZNF771Q7L3S4 317 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-218ENST00000541615 RNF166Q96A37 237 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-218ENST00000541615 UPF2Q9HAU5 1272 aaKnown RBP6.44□□□□□ -1.38
SNHG1-218ENST00000541615 E9PSI1 815 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 ECM2O94769 699 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-218ENST00000541615 ZNF853P0CG23 659 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
SNHG1-218ENST00000541615 GTF2A1P52655 376 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-218ENST00000541615 SKOR2Q2VWA4 1001 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-218ENST00000541615 ARSIQ5FYB1 569 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 GOLGA6L1Q8N7Z2 621 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 MKL1Q969V6 931 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 PPP1R9BQ96SB3 815 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 NBPF3Q9H094 633 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 GRPEL1Q9HAV7 217 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 DONSONQ9NYP3 566 aa6.43□□□□□ -1.38
SNHG1-218ENST00000541615 FEZ2Q9UHY8 353 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-218ENST00000541615 SMG6Q86US8 1419 aaKnown RBP6.42□□□□□ -1.38
SNHG1-218ENST00000541615 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.42□□□□□ -1.386e-32■□□□□ 8.9
SNHG1-218ENST00000541615 ZNF526Q8TF50 670 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-218ENST00000541615 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
SNHG1-218ENST00000541615 MED4Q9NPJ6 270 aa6.42□□□□□ -1.38
SNHG1-218ENST00000541615 KIF16BQ96L93 1317 aa6.42□□□□□ -1.38
SNHG1-218ENST00000541615 DDX11L8A8MPP1 907 aa6.41□□□□□ -1.38
SNHG1-218ENST00000541615 ARID4AP29374 1257 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-218ENST00000541615 TSHZ1Q6ZSZ6 1077 aa6.41□□□□□ -1.38
SNHG1-218ENST00000541615 OGFRQ9NZT2 677 aa6.41□□□□□ -1.38
SNHG1-218ENST00000541615 IBTKQ9P2D0 1353 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-218ENST00000541615 SCAPERQ9BY12 1400 aa6.41□□□□□ -1.38
SNHG1-218ENST00000541615 C2orf72A6NCS6 295 aa6.4□□□□□ -1.38
SNHG1-218ENST00000541615 PPP1R12AO14974 1030 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-218ENST00000541615 SLC34A2O95436 690 aa6.4□□□□□ -1.38
SNHG1-218ENST00000541615 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.38
SNHG1-218ENST00000541615 DDX10Q13206 875 aaKnown RBP6.4□□□□□ -1.38
SNHG1-218ENST00000541615 AEBP1Q8IUX7 1158 aa6.4□□□□□ -1.38
SNHG1-218ENST00000541615 ITFG2Q969R8 447 aa6.4□□□□□ -1.38
SNHG1-218ENST00000541615 TACO1Q9BSH4 297 aaKnown RBP6.4□□□□□ -1.38
SNHG1-218ENST00000541615 R3HCC1Q9Y3T6 440 aaKnown RBP6.4□□□□□ -1.38
SNHG1-218ENST00000541615 CFAP65Q6ZU64 1925 aaKnown RBP6.4□□□□□ -1.39
SNHG1-218ENST00000541615 NACADO15069 1562 aa6.4□□□□□ -1.39
SNHG1-218ENST00000541615 TRIM6-TRIM34B2RNG4 842 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 HSPA5P11021 654 aaKnown RBP6.39□□□□□ -1.39
SNHG1-218ENST00000541615 TDO2P48775 406 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 SEMA3FQ13275 785 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 CCDC27Q2M243 656 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 CCDC91Q7Z6B0 441 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 MYRIPQ8NFW9 859 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 TRIM34Q9BYJ4 488 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
SNHG1-218ENST00000541615 POGKQ9P215 609 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 NOL7Q9UMY1 257 aaKnown RBP6.39□□□□□ -1.39
SNHG1-218ENST00000541615 DHX57Q6P158 1386 aaKnown RBP6.39□□□□□ -1.39
SNHG1-218ENST00000541615 CCDC144AA2RUR9 1427 aa6.39□□□□□ -1.39
SNHG1-218ENST00000541615 LOC102724159A0A0B4J2E5 919 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 MTA1Q13330 715 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 PKD2Q13563 968 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 PWP2Q15269 919 aaKnown RBP6.38□□□□□ -1.39
SNHG1-218ENST00000541615 ICE2Q659A1 982 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 NGEFQ8N5V2 710 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 TMC1Q8TDI8 760 aa6.38□□□□□ -1.39
SNHG1-218ENST00000541615 KHSRPQ92945 711 aaKnown RBP eCLIP6.38□□□□□ -1.392e-12■■■□□ 16.9
SNHG1-218ENST00000541615 CCDC196A0A1B0GTZ2 297 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 RGL2O15211 777 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 CTAGE5O15320 804 aa6.37□□□□□ -1.39
SNHG1-218ENST00000541615 PBX2P40425 430 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms