RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
YBX3-211ENST00000541351 DAPK1P53355 1430 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 A0A0G2JS52 829 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 MYT1Q01538 1121 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 VPS72Q15906 364 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 ORAI2Q96SN7 254 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 SLIT2O94813 1529 aa14.86□□□□□ -0.03
YBX3-211ENST00000541351 GLI3P10071 1580 aa14.85□□□□□ -0.03
YBX3-211ENST00000541351 ONECUT3O60422 494 aaPredicted RBP14.85□□□□□ -0.03
YBX3-211ENST00000541351 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
YBX3-211ENST00000541351 EN1Q05925 392 aaPredicted RBP14.84□□□□□ -0.03
YBX3-211ENST00000541351 NINLQ9Y2I6 1382 aa14.84□□□□□ -0.03
YBX3-211ENST00000541351 NALCNQ8IZF0 1738 aa14.83□□□□□ -0.04
YBX3-211ENST00000541351 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
YBX3-211ENST00000541351 CHIC2Q9UKJ5 165 aa14.82□□□□□ -0.04
YBX3-211ENST00000541351 BRWD3Q6RI45 1802 aa14.82□□□□□ -0.04
YBX3-211ENST00000541351 METP08581 1390 aa14.81□□□□□ -0.04
YBX3-211ENST00000541351 PARD3Q8TEW0 1356 aa14.81□□□□□ -0.04
YBX3-211ENST00000541351 DISP2A7MBM2 1401 aa14.81□□□□□ -0.04
YBX3-211ENST00000541351 ZNF326Q5BKZ1 582 aaKnown RBP14.8□□□□□ -0.04
YBX3-211ENST00000541351 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 NBPF8Q3BBV2 869 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 NBPF14Q5TI25 921 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 SPON1Q9HCB6 807 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 ANKRD50Q9ULJ7 1429 aa14.79□□□□□ -0.04
YBX3-211ENST00000541351 C1QTNF8P60827 252 aa14.78□□□□□ -0.04
YBX3-211ENST00000541351 ZNF784Q8NCA9 323 aaPredicted RBP14.78□□□□□ -0.04
YBX3-211ENST00000541351 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.04
YBX3-211ENST00000541351 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
YBX3-211ENST00000541351 PXDNQ92626 1479 aa14.77□□□□□ -0.04
YBX3-211ENST00000541351 FOXO3O43524 673 aa14.77□□□□□ -0.05
YBX3-211ENST00000541351 HFM1A2PYH4 1435 aa14.76□□□□□ -0.05
YBX3-211ENST00000541351 NRXN3Q9Y4C0 1643 aa14.76□□□□□ -0.05
YBX3-211ENST00000541351 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
YBX3-211ENST00000541351 NWD2Q9ULI1 1742 aa14.73□□□□□ -0.05
YBX3-211ENST00000541351 EZH2Q15910 746 aaKnown RBP14.73□□□□□ -0.05
YBX3-211ENST00000541351 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
YBX3-211ENST00000541351 SPATA31A3Q5VYP0 1347 aa14.72□□□□□ -0.05
YBX3-211ENST00000541351 KCNQ2O43526 872 aa14.72□□□□□ -0.05
YBX3-211ENST00000541351 XPCQ01831 940 aaPredicted RBP14.72□□□□□ -0.05
YBX3-211ENST00000541351 FAM98CQ17RN3 349 aaKnown RBP14.72□□□□□ -0.05
YBX3-211ENST00000541351 PSME1Q06323 249 aa14.71□□□□□ -0.05
YBX3-211ENST00000541351 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.05
YBX3-211ENST00000541351 PRAG1Q86YV5 1406 aa14.7□□□□□ -0.06
YBX3-211ENST00000541351 VPS8Q8N3P4 1428 aa14.7□□□□□ -0.06
YBX3-211ENST00000541351 APLP2Q06481 763 aa14.7□□□□□ -0.06
YBX3-211ENST00000541351 FAM196AQ6ZSG2 479 aa14.7□□□□□ -0.06
YBX3-211ENST00000541351 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
YBX3-211ENST00000541351 E9PCH4 1651 aa14.69□□□□□ -0.06
YBX3-211ENST00000541351 ROBO2Q9HCK4 1378 aa14.69□□□□□ -0.06
YBX3-211ENST00000541351 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
YBX3-211ENST00000541351 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
YBX3-211ENST00000541351 APBA3O96018 575 aa14.67□□□□□ -0.06
YBX3-211ENST00000541351 ARHGEF10O15013 1369 aa14.66□□□□□ -0.06
YBX3-211ENST00000541351 KRT28Q7Z3Y7 464 aa14.65□□□□□ -0.06
YBX3-211ENST00000541351 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
YBX3-211ENST00000541351 PLCH1Q4KWH8 1693 aa14.65□□□□□ -0.06
YBX3-211ENST00000541351 GIGYF1O75420 1035 aaPredicted RBP14.64□□□□□ -0.07
YBX3-211ENST00000541351 TRIM37O94972 964 aa14.64□□□□□ -0.07
YBX3-211ENST00000541351 KIF1AQ12756 1690 aa14.63□□□□□ -0.07
YBX3-211ENST00000541351 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
YBX3-211ENST00000541351 NUP155O75694 1391 aa14.62□□□□□ -0.07
YBX3-211ENST00000541351 LMOD2Q6P5Q4 547 aa14.62□□□□□ -0.07
YBX3-211ENST00000541351 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
YBX3-211ENST00000541351 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
YBX3-211ENST00000541351 FAM182BQ5T319 152 aa14.61□□□□□ -0.07
YBX3-211ENST00000541351 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
YBX3-211ENST00000541351 NEXMIFQ5QGS0 1516 aa14.6□□□□□ -0.07
YBX3-211ENST00000541351 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
YBX3-211ENST00000541351 NAIPQ13075 1403 aa14.59□□□□□ -0.07
YBX3-211ENST00000541351 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
YBX3-211ENST00000541351 CABLES1Q8TDN4 633 aa14.59□□□□□ -0.07
YBX3-211ENST00000541351 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
YBX3-211ENST00000541351 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
YBX3-211ENST00000541351 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
YBX3-211ENST00000541351 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
YBX3-211ENST00000541351 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
YBX3-211ENST00000541351 RPGRIP1LQ68CZ1 1315 aa14.57□□□□□ -0.08
YBX3-211ENST00000541351 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
YBX3-211ENST00000541351 RREB1Q92766 1687 aa14.55□□□□□ -0.08
YBX3-211ENST00000541351 CHD4Q14839 1912 aa14.55□□□□□ -0.08
YBX3-211ENST00000541351 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
YBX3-211ENST00000541351 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
YBX3-211ENST00000541351 CAMTA1Q9Y6Y1 1673 aa14.54□□□□□ -0.08
YBX3-211ENST00000541351 COL14A1Q05707 1796 aaKnown RBP14.53□□□□□ -0.08
YBX3-211ENST00000541351 NUP188Q5SRE5 1749 aa14.53□□□□□ -0.08
YBX3-211ENST00000541351 NRAPQ86VF7 1730 aa14.53□□□□□ -0.08
YBX3-211ENST00000541351 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
YBX3-211ENST00000541351 PRDM11Q9NQV5 511 aa14.51□□□□□ -0.09
YBX3-211ENST00000541351 SYT17Q9BSW7 474 aa14.5□□□□□ -0.09
YBX3-211ENST00000541351 KIF1BO60333 1816 aa14.5□□□□□ -0.09
YBX3-211ENST00000541351 TECPR2O15040 1411 aa14.49□□□□□ -0.09
YBX3-211ENST00000541351 ABCA3Q99758 1704 aa14.49□□□□□ -0.09
YBX3-211ENST00000541351 SPATA31A1Q5TZJ5 1347 aa14.49□□□□□ -0.09
YBX3-211ENST00000541351 NRKQ7Z2Y5 1582 aa14.49□□□□□ -0.09
YBX3-211ENST00000541351 FHDC1Q9C0D6 1143 aaPredicted RBP14.48□□□□□ -0.09
YBX3-211ENST00000541351 FMN2Q9NZ56 1722 aa14.47□□□□□ -0.09
YBX3-211ENST00000541351 NRXN1Q9ULB1 1477 aa14.47□□□□□ -0.09
YBX3-211ENST00000541351 BARGINQ6ZT62 677 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms