RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
CHFR-219ENST00000541341 FKBP8Q14318 412 aa14.3□□□□□ -0.12
CHFR-219ENST00000541341 UPF1Q92900 1129 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■□□ 15.9
CHFR-219ENST00000541341 MPHOSPH9Q99550 1183 aa14.3□□□□□ -0.12
CHFR-219ENST00000541341 RXRBP28702 533 aa14.29□□□□□ -0.12
CHFR-219ENST00000541341 DCCP43146 1447 aa14.29□□□□□ -0.12
CHFR-219ENST00000541341 ADGRL3Q9HAR2 1447 aa14.29□□□□□ -0.12
CHFR-219ENST00000541341 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
CHFR-219ENST00000541341 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
CHFR-219ENST00000541341 FANCIQ9NVI1 1328 aa14.28□□□□□ -0.12
CHFR-219ENST00000541341 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.13
CHFR-219ENST00000541341 MARF1Q9Y4F3 1742 aaKnown RBP14.27□□□□□ -0.13
CHFR-219ENST00000541341 PNPLA6Q8IY17 1366 aa14.26□□□□□ -0.13
CHFR-219ENST00000541341 FOXD1Q16676 465 aa14.26□□□□□ -0.13
CHFR-219ENST00000541341 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
CHFR-219ENST00000541341 LRRC59Q96AG4 307 aaKnown RBP14.25□□□□□ -0.13
CHFR-219ENST00000541341 ORAI2Q96SN7 254 aa14.25□□□□□ -0.13
CHFR-219ENST00000541341 RGS12O14924 1447 aa14.24□□□□□ -0.13
CHFR-219ENST00000541341 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
CHFR-219ENST00000541341 ROBO2Q9HCK4 1378 aa14.24□□□□□ -0.13
CHFR-219ENST00000541341 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
CHFR-219ENST00000541341 QTRT2Q9H974 415 aaKnown RBP14.24□□□□□ -0.13
CHFR-219ENST00000541341 IFT172Q9UG01 1749 aa14.24□□□□□ -0.13
CHFR-219ENST00000541341 ANKRD30BQ9BXX2 1392 aa14.23□□□□□ -0.13
CHFR-219ENST00000541341 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
CHFR-219ENST00000541341 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
CHFR-219ENST00000541341 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
CHFR-219ENST00000541341 LAMC1P11047 1609 aa14.22□□□□□ -0.13
CHFR-219ENST00000541341 XPCQ01831 940 aaPredicted RBP14.21□□□□□ -0.13
CHFR-219ENST00000541341 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
CHFR-219ENST00000541341 STK26Q9P289 416 aa14.2□□□□□ -0.14
CHFR-219ENST00000541341 PTCH1Q13635 1447 aa14.19□□□□□ -0.14
CHFR-219ENST00000541341 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
CHFR-219ENST00000541341 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
CHFR-219ENST00000541341 COL22A1Q8NFW1 1626 aaPredicted RBP14.19□□□□□ -0.14
CHFR-219ENST00000541341 CDK12Q9NYV4 1490 aaPredicted RBP14.18□□□□□ -0.14
CHFR-219ENST00000541341 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
CHFR-219ENST00000541341 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
CHFR-219ENST00000541341 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
CHFR-219ENST00000541341 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
CHFR-219ENST00000541341 USP21Q9UK80 565 aa14.17□□□□□ -0.14
CHFR-219ENST00000541341 FMN2Q9NZ56 1722 aa14.16□□□□□ -0.14
CHFR-219ENST00000541341 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
CHFR-219ENST00000541341 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
CHFR-219ENST00000541341 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
CHFR-219ENST00000541341 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
CHFR-219ENST00000541341 KNDC1Q76NI1 1749 aa14.15□□□□□ -0.14
CHFR-219ENST00000541341 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
CHFR-219ENST00000541341 TMEM132EQ6IEE7 984 aa14.15□□□□□ -0.14
CHFR-219ENST00000541341 WAPLQ7Z5K2 1190 aa14.15□□□□□ -0.14
CHFR-219ENST00000541341 SPATA31E1Q6ZUB1 1445 aa14.14□□□□□ -0.15
CHFR-219ENST00000541341 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
CHFR-219ENST00000541341 EP400Q96L91 3159 aa14.13□□□□□ -0.15
CHFR-219ENST00000541341 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
CHFR-219ENST00000541341 PXDNQ92626 1479 aa14.12□□□□□ -0.15
CHFR-219ENST00000541341 FOXO3O43524 673 aa14.12□□□□□ -0.15
CHFR-219ENST00000541341 RPGRIP1LQ68CZ1 1315 aa14.12□□□□□ -0.15
CHFR-219ENST00000541341 TRPC5Q9UL62 973 aaPredicted RBP14.1□□□□□ -0.15
CHFR-219ENST00000541341 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
CHFR-219ENST00000541341 ATRNO75882 1429 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 MYOM2P54296 1465 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 KIF1AQ12756 1690 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 ABCA3Q99758 1704 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.09□□□□□ -0.15
CHFR-219ENST00000541341 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 ATAD2Q6PL18 1390 aa14.09□□□□□ -0.15
CHFR-219ENST00000541341 SAFB2Q14151 953 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHFR-219ENST00000541341 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
CHFR-219ENST00000541341 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
CHFR-219ENST00000541341 GLI3P10071 1580 aa14.07□□□□□ -0.16
CHFR-219ENST00000541341 USP32Q8NFA0 1604 aa14.06□□□□□ -0.16
CHFR-219ENST00000541341 FNBP4Q8N3X1 1017 aaPredicted RBP14.06□□□□□ -0.16
CHFR-219ENST00000541341 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
CHFR-219ENST00000541341 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
CHFR-219ENST00000541341 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
CHFR-219ENST00000541341 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
CHFR-219ENST00000541341 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
CHFR-219ENST00000541341 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
CHFR-219ENST00000541341 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
CHFR-219ENST00000541341 EIF4G2P78344 907 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHFR-219ENST00000541341 KRT28Q7Z3Y7 464 aa14.03□□□□□ -0.16
CHFR-219ENST00000541341 TECPR2O15040 1411 aa14.03□□□□□ -0.16
CHFR-219ENST00000541341 NRXN1Q9ULB1 1477 aa14.03□□□□□ -0.16
CHFR-219ENST00000541341 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
CHFR-219ENST00000541341 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
CHFR-219ENST00000541341 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
CHFR-219ENST00000541341 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
CHFR-219ENST00000541341 SRCAPQ6ZRS2 3230 aa14.01□□□□□ -0.17
CHFR-219ENST00000541341 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHFR-219ENST00000541341 STAC3Q96MF2 364 aa14.01□□□□□ -0.17
CHFR-219ENST00000541341 ABCC11Q96J66 1382 aa14□□□□□ -0.17
CHFR-219ENST00000541341 SPATA31A3Q5VYP0 1347 aa14□□□□□ -0.17
CHFR-219ENST00000541341 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
CHFR-219ENST00000541341 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
CHFR-219ENST00000541341 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
CHFR-219ENST00000541341 ZBED9Q6R2W3 1325 aa13.99□□□□□ -0.17
CHFR-219ENST00000541341 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
CHFR-219ENST00000541341 PHF8Q9UPP1 1060 aa13.99□□□□□ -0.17
CHFR-219ENST00000541341 NRAPQ86VF7 1730 aa13.98□□□□□ -0.17
CHFR-219ENST00000541341 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms