RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, human

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRE11-210	ENST00000541157	RIMS2	Q9UQ26	1411 aa		14.04	□□□□□ -0.16
MRE11-210	ENST00000541157	DCAF8	Q5TAQ9	597 aa		14.03	□□□□□ -0.16
MRE11-210	ENST00000541157	SCAF11	Q99590	1463 aa	Known RBP	14.03	□□□□□ -0.16
MRE11-210	ENST00000541157	MYO3A	Q8NEV4	1616 aa		14.03	□□□□□ -0.16
MRE11-210	ENST00000541157	POLR1A	O95602	1720 aa	Predicted RBP	14.02	□□□□□ -0.16
MRE11-210	ENST00000541157	ADGRB1	O14514	1584 aa		14.02	□□□□□ -0.16
MRE11-210	ENST00000541157	CFAP70	Q5T0N1	1121 aa		14.02	□□□□□ -0.17
MRE11-210	ENST00000541157	C14orf93	Q9H972	538 aa	Known RBP	14.02	□□□□□ -0.17
MRE11-210	ENST00000541157	CCDC7	Q96M83	1385 aa		14	□□□□□ -0.17
MRE11-210	ENST00000541157	TMEM2	Q9UHN6	1383 aa		14	□□□□□ -0.17
MRE11-210	ENST00000541157	WASHC2A	Q641Q2	1341 aa		14	□□□□□ -0.17
MRE11-210	ENST00000541157	ST20-MTHFS	A0A0A6YYL1	179 aa		14	□□□□□ -0.17
MRE11-210	ENST00000541157	NUTM2D	Q5VT03	806 aa	Predicted RBP	14	□□□□□ -0.17
MRE11-210	ENST00000541157	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
MRE11-210	ENST00000541157	EIF3A	Q14152	1382 aa	Known RBP	13.98	□□□□□ -0.17
MRE11-210	ENST00000541157	C11orf95	C9JLR9	678 aa	Predicted RBP	13.98	□□□□□ -0.17
MRE11-210	ENST00000541157	GSE1	Q14687	1217 aa		13.98	□□□□□ -0.17
MRE11-210	ENST00000541157	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.98	□□□□□ -0.17
MRE11-210	ENST00000541157	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	KIF7	Q2M1P5	1343 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	SLIT1	O75093	1534 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	ASXL1	Q8IXJ9	1541 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	ZNF579	Q8NAF0	562 aa	Known RBP	13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	CCDC61	Q9Y6R9	512 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	PTPRM	P28827	1452 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	ARHGAP23	Q9P227	1491 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	ZNF142	P52746	1687 aa	Predicted RBP	13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	ALK	Q9UM73	1620 aa		13.97	□□□□□ -0.17
MRE11-210	ENST00000541157	HDGF	P51858	240 aa	Known RBP	13.96	□□□□□ -0.17
MRE11-210	ENST00000541157	DDX10	Q13206	875 aa	Known RBP	13.96	□□□□□ -0.17
MRE11-210	ENST00000541157	NRXN3	Q9Y4C0	1643 aa		13.95	□□□□□ -0.18
MRE11-210	ENST00000541157	PHF12	Q96QT6	1004 aa		13.95	□□□□□ -0.18
MRE11-210	ENST00000541157	TESK2	Q96S53	571 aa		13.95	□□□□□ -0.18
MRE11-210	ENST00000541157	SETD1A	O15047	1707 aa	Known RBP	13.94	□□□□□ -0.18
MRE11-210	ENST00000541157	SP7	Q8TDD2	431 aa	Predicted RBP	13.94	□□□□□ -0.18
MRE11-210	ENST00000541157	TMEM132E	Q6IEE7	984 aa		13.92	□□□□□ -0.18
MRE11-210	ENST00000541157	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.92	□□□□□ -0.18
MRE11-210	ENST00000541157	PLEKHG1	Q9ULL1	1385 aa		13.92	□□□□□ -0.18
MRE11-210	ENST00000541157	SBNO2	Q9Y2G9	1366 aa		13.92	□□□□□ -0.18
MRE11-210	ENST00000541157	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.91	□□□□□ -0.18
MRE11-210	ENST00000541157	DISP3	Q9P2K9	1392 aa		13.91	□□□□□ -0.18
MRE11-210	ENST00000541157	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.9	□□□□□ -0.19
MRE11-210	ENST00000541157	LTK	P29376	864 aa		13.89	□□□□□ -0.19
MRE11-210	ENST00000541157	TMF1	P82094	1093 aa		13.89	□□□□□ -0.19
MRE11-210	ENST00000541157	EID1	Q9Y6B2	187 aa		13.89	□□□□□ -0.19
MRE11-210	ENST00000541157	ADAMTS13	Q76LX8	1427 aa		13.89	□□□□□ -0.19
MRE11-210	ENST00000541157	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.89	□□□□□ -0.19
MRE11-210	ENST00000541157	QRICH2	Q9H0J4	1663 aa		13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	LRPPRC	P42704	1394 aa	Known RBP	13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	SLC24A1	O60721	1099 aa		13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	TXNDC2	Q86VQ3	553 aa		13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	TRAK1	Q9UPV9	953 aa		13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	SETD1B	Q9UPS6	1966 aa	Known RBP	13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	DLC1	Q96QB1	1528 aa		13.88	□□□□□ -0.19
MRE11-210	ENST00000541157	MED14	O60244	1454 aa		13.87	□□□□□ -0.19
MRE11-210	ENST00000541157	PYGB	P11216	843 aa		13.87	□□□□□ -0.19
MRE11-210	ENST00000541157	DIP2A	Q14689	1571 aa		13.86	□□□□□ -0.19
MRE11-210	ENST00000541157	MET	P08581	1390 aa		13.85	□□□□□ -0.19
MRE11-210	ENST00000541157	CDCA8	Q53HL2	280 aa		13.85	□□□□□ -0.19
MRE11-210	ENST00000541157	KIF12	Q96FN5	646 aa		13.85	□□□□□ -0.19
MRE11-210	ENST00000541157	ABCC11	Q96J66	1382 aa		13.84	□□□□□ -0.19
MRE11-210	ENST00000541157	KNDC1	Q76NI1	1749 aa		13.84	□□□□□ -0.19
MRE11-210	ENST00000541157	TECPR2	O15040	1411 aa		13.84	□□□□□ -0.19
MRE11-210	ENST00000541157	POLR3GL	Q9BT43	218 aa		13.84	□□□□□ -0.19
MRE11-210	ENST00000541157	STK26	Q9P289	416 aa		13.84	□□□□□ -0.19
MRE11-210	ENST00000541157	GABBR2	O75899	941 aa		13.83	□□□□□ -0.2
MRE11-210	ENST00000541157	BCAN	Q96GW7	911 aa		13.83	□□□□□ -0.2
MRE11-210	ENST00000541157	CPS1	P31327	1500 aa		13.83	□□□□□ -0.2
MRE11-210	ENST00000541157	TULP4	Q9NRJ4	1543 aa		13.81	□□□□□ -0.2
MRE11-210	ENST00000541157	KDM4F	A0A1W2PPD8	638 aa		13.81	□□□□□ -0.2
MRE11-210	ENST00000541157	MAP3K13	O43283	966 aa		13.81	□□□□□ -0.2
MRE11-210	ENST00000541157	TBX22	Q9Y458	520 aa		13.81	□□□□□ -0.2
MRE11-210	ENST00000541157	FAM135B	Q49AJ0	1406 aa		13.81	□□□□□ -0.2
MRE11-210	ENST00000541157	MYOM1	P52179	1685 aa		13.8	□□□□□ -0.2
MRE11-210	ENST00000541157	CLCN6	P51797	869 aa		13.8	□□□□□ -0.2
MRE11-210	ENST00000541157	ANKLE2	Q86XL3	938 aa		13.8	□□□□□ -0.2
MRE11-210	ENST00000541157	SIRT1	Q96EB6	747 aa		13.8	□□□□□ -0.2
MRE11-210	ENST00000541157	PRAM1	Q96QH2	718 aa		13.8	□□□□□ -0.2
MRE11-210	ENST00000541157	ANP32C	O43423	234 aa		13.79	□□□□□ -0.2
MRE11-210	ENST00000541157	GALR2	O43603	387 aa	Predicted RBP	13.78	□□□□□ -0.2
MRE11-210	ENST00000541157	MS4A3	Q96HJ5	214 aa		13.78	□□□□□ -0.2
MRE11-210	ENST00000541157	PUS7	Q96PZ0	661 aa	Known RBP	13.78	□□□□□ -0.2
MRE11-210	ENST00000541157	SLC26A8	Q96RN1	970 aa		13.78	□□□□□ -0.2
MRE11-210	ENST00000541157	POGK	Q9P215	609 aa		13.78	□□□□□ -0.2
MRE11-210	ENST00000541157	EVC2	Q86UK5	1308 aa		13.77	□□□□□ -0.21
MRE11-210	ENST00000541157	XRN1	Q8IZH2	1706 aa	Known RBP	13.77	□□□□□ -0.21
MRE11-210	ENST00000541157	PTPRU	Q92729	1446 aa		13.77	□□□□□ -0.21
MRE11-210	ENST00000541157	PIK3R4	Q99570	1358 aa		13.77	□□□□□ -0.21
MRE11-210	ENST00000541157	PCDHB13	Q9Y5F0	798 aa		13.77	□□□□□ -0.21
MRE11-210	ENST00000541157	NPHP4	O75161	1426 aa	Predicted RBP	13.76	□□□□□ -0.21
MRE11-210	ENST00000541157	PLEKHH1	Q9ULM0	1364 aa		13.76	□□□□□ -0.21
MRE11-210	ENST00000541157	CHRM1	P11229	460 aa	Predicted RBP	13.76	□□□□□ -0.21
MRE11-210	ENST00000541157	PTCH1	Q13635	1447 aa		13.75	□□□□□ -0.21
MRE11-210	ENST00000541157	ROBO2	Q9HCK4	1378 aa		13.75	□□□□□ -0.21
MRE11-210	ENST00000541157	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
MRE11-210	ENST00000541157	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.74	□□□□□ -0.21
MRE11-210	ENST00000541157	ECM2	O94769	699 aa	Predicted RBP	13.74	□□□□□ -0.21
MRE11-210	ENST00000541157	WAPL	Q7Z5K2	1190 aa		13.74	□□□□□ -0.21
MRE11-210	ENST00000541157	SGIP1	Q9BQI5	828 aa		13.73	□□□□□ -0.21
MRE11-210	ENST00000541157	PANK3	Q9H999	370 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms