RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
TCF4-207ENST00000540999 MLECQ14165 292 aa11.61□□□□□ -0.55
TCF4-207ENST00000540999 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
TCF4-207ENST00000540999 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
TCF4-207ENST00000540999 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
TCF4-207ENST00000540999 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
TCF4-207ENST00000540999 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
TCF4-207ENST00000540999 CAMSAP1Q5T5Y3 1602 aa11.59□□□□□ -0.55
TCF4-207ENST00000540999 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
TCF4-207ENST00000540999 TRPM1Q7Z4N2 1603 aa11.59□□□□□ -0.55
TCF4-207ENST00000540999 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
TCF4-207ENST00000540999 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
TCF4-207ENST00000540999 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
TCF4-207ENST00000540999 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
TCF4-207ENST00000540999 ZNF622Q969S3 477 aaKnown RBP eCLIP11.57□□□□□ -0.565e-7■□□□□ 11.2
TCF4-207ENST00000540999 MROH2AA6NES4 1674 aa11.57□□□□□ -0.56
TCF4-207ENST00000540999 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
TCF4-207ENST00000540999 FBXO31Q5XUX0 539 aaPredicted RBP11.56□□□□□ -0.56
TCF4-207ENST00000540999 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
TCF4-207ENST00000540999 KIF1BO60333 1816 aa11.56□□□□□ -0.56
TCF4-207ENST00000540999 PHF14O94880 888 aa11.55□□□□□ -0.56
TCF4-207ENST00000540999 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
TCF4-207ENST00000540999 USP35Q9P2H5 1018 aa11.55□□□□□ -0.56
TCF4-207ENST00000540999 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 MMP14P50281 582 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 HDAC5Q9UQL6 1122 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 SYNMO15061 1565 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 MADDQ8WXG6 1647 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 SOX12O15370 315 aa11.54□□□□□ -0.56
TCF4-207ENST00000540999 FAM177A1Q8N128 213 aaPredicted RBP11.54□□□□□ -0.56
TCF4-207ENST00000540999 ARHGEF40Q8TER5 1519 aa11.53□□□□□ -0.56
TCF4-207ENST00000540999 NBR1Q14596 966 aa11.53□□□□□ -0.56
TCF4-207ENST00000540999 CCDC27Q2M243 656 aa11.53□□□□□ -0.56
TCF4-207ENST00000540999 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
TCF4-207ENST00000540999 NOS1P29475 1434 aa11.53□□□□□ -0.56
TCF4-207ENST00000540999 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.56
TCF4-207ENST00000540999 IDI1Q13907 227 aa11.52□□□□□ -0.56
TCF4-207ENST00000540999 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
TCF4-207ENST00000540999 MAFGO15525 162 aa11.52□□□□□ -0.57
TCF4-207ENST00000540999 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
TCF4-207ENST00000540999 ZC3H13Q5T200 1668 aaKnown RBP11.51□□□□□ -0.57
TCF4-207ENST00000540999 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 ADGRB3O60242 1522 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
TCF4-207ENST00000540999 GPRASP1Q5JY77 1395 aa11.51□□□□□ -0.57
TCF4-207ENST00000540999 AGLP35573 1532 aa11.5□□□□□ -0.57
TCF4-207ENST00000540999 ARHGAP31Q2M1Z3 1444 aa11.5□□□□□ -0.57
TCF4-207ENST00000540999 POLR1AO95602 1720 aaPredicted RBP11.5□□□□□ -0.57
TCF4-207ENST00000540999 CENPJQ9HC77 1338 aaPredicted RBP11.5□□□□□ -0.57
TCF4-207ENST00000540999 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
TCF4-207ENST00000540999 IFT172Q9UG01 1749 aa11.49□□□□□ -0.57
TCF4-207ENST00000540999 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
TCF4-207ENST00000540999 PIK3C2BO00750 1634 aa11.49□□□□□ -0.57
TCF4-207ENST00000540999 ANP32CO43423 234 aa11.49□□□□□ -0.57
TCF4-207ENST00000540999 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
TCF4-207ENST00000540999 APPP05067 770 aa11.48□□□□□ -0.57
TCF4-207ENST00000540999 FAM43AQ8N2R8 423 aa11.48□□□□□ -0.57
TCF4-207ENST00000540999 TESK2Q96S53 571 aa11.47□□□□□ -0.57
TCF4-207ENST00000540999 NEURL4Q96JN8 1562 aa11.47□□□□□ -0.57
TCF4-207ENST00000540999 PPLO60437 1756 aa11.47□□□□□ -0.57
TCF4-207ENST00000540999 VGLL3A8MV65 326 aa11.46□□□□□ -0.57
TCF4-207ENST00000540999 KDM4AO75164 1064 aa11.46□□□□□ -0.57
TCF4-207ENST00000540999 ERVK-7P63135 1459 aa11.46□□□□□ -0.58
TCF4-207ENST00000540999 AXDND1Q5T1B0 1012 aaPredicted RBP11.46□□□□□ -0.58
TCF4-207ENST00000540999 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
TCF4-207ENST00000540999 MYOM2P54296 1465 aa11.45□□□□□ -0.58
TCF4-207ENST00000540999 LAMC1P11047 1609 aa11.45□□□□□ -0.58
TCF4-207ENST00000540999 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
TCF4-207ENST00000540999 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
TCF4-207ENST00000540999 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
TCF4-207ENST00000540999 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
TCF4-207ENST00000540999 ZMYM3Q14202 1370 aa11.44□□□□□ -0.58
TCF4-207ENST00000540999 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
TCF4-207ENST00000540999 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
TCF4-207ENST00000540999 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
TCF4-207ENST00000540999 TMEM131LA2VDJ0 1609 aa11.43□□□□□ -0.58
TCF4-207ENST00000540999 CEBPAP49715 358 aaPredicted RBP11.43□□□□□ -0.58
TCF4-207ENST00000540999 CCDC184Q52MB2 194 aa11.43□□□□□ -0.58
TCF4-207ENST00000540999 ZBTB22O15209 634 aa11.42□□□□□ -0.58
TCF4-207ENST00000540999 RAD21O60216 631 aa11.42□□□□□ -0.58
TCF4-207ENST00000540999 RBM25P49756 843 aaKnown RBP11.42□□□□□ -0.58
TCF4-207ENST00000540999 PIK3C2GO75747 1445 aa11.42□□□□□ -0.58
TCF4-207ENST00000540999 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
TCF4-207ENST00000540999 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
TCF4-207ENST00000540999 FKBP8Q14318 412 aa11.41□□□□□ -0.58
TCF4-207ENST00000540999 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
TCF4-207ENST00000540999 PSEN1P49768 467 aa11.41□□□□□ -0.58
TCF4-207ENST00000540999 C14orf93Q9H972 538 aaKnown RBP11.41□□□□□ -0.58
TCF4-207ENST00000540999 TRAK1Q9UPV9 953 aa11.41□□□□□ -0.58
TCF4-207ENST00000540999 KIAA1210Q9ULL0 1709 aa11.41□□□□□ -0.58
TCF4-207ENST00000540999 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
TCF4-207ENST00000540999 RPGRIP1LQ68CZ1 1315 aa11.4□□□□□ -0.58
TCF4-207ENST00000540999 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
TCF4-207ENST00000540999 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
TCF4-207ENST00000540999 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
TCF4-207ENST00000540999 FOXD4L4Q8WXT5 416 aaPredicted RBP11.39□□□□□ -0.59
TCF4-207ENST00000540999 MTMR7Q9Y216 660 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms