RNA–Protein interactions for RNA: ENST00000540956.1

TDG-206, Transcript of thymine DNA glycosylase, humanhuman

TSL 2

Gene TDG, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-206ENST00000540956 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
TDG-206ENST00000540956 GJA5P36382 358 aa12.2□□□□□ -0.46
TDG-206ENST00000540956 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
TDG-206ENST00000540956 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
TDG-206ENST00000540956 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
TDG-206ENST00000540956 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
TDG-206ENST00000540956 FCF1Q9Y324 198 aaKnown RBP12.2□□□□□ -0.46
TDG-206ENST00000540956 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
TDG-206ENST00000540956 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
TDG-206ENST00000540956 SLC19A1P41440 591 aa12.18□□□□□ -0.46
TDG-206ENST00000540956 NISCHQ9Y2I1 1504 aa12.17□□□□□ -0.46
TDG-206ENST00000540956 MMP16P51512 607 aa12.17□□□□□ -0.46
TDG-206ENST00000540956 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
TDG-206ENST00000540956 SPTLC1O15269 473 aa12.16□□□□□ -0.46
TDG-206ENST00000540956 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
TDG-206ENST00000540956 MTMR2Q13614 643 aa12.16□□□□□ -0.46
TDG-206ENST00000540956 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
TDG-206ENST00000540956 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
TDG-206ENST00000540956 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
TDG-206ENST00000540956 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
TDG-206ENST00000540956 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
TDG-206ENST00000540956 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
TDG-206ENST00000540956 JUNDP17535 347 aa12.13□□□□□ -0.47
TDG-206ENST00000540956 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
TDG-206ENST00000540956 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
TDG-206ENST00000540956 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
TDG-206ENST00000540956 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
TDG-206ENST00000540956 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
TDG-206ENST00000540956 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
TDG-206ENST00000540956 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
TDG-206ENST00000540956 RPIAP49247 311 aa12.1□□□□□ -0.47
TDG-206ENST00000540956 CLK2P49760 499 aaKnown RBP12.1□□□□□ -0.47
TDG-206ENST00000540956 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
TDG-206ENST00000540956 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
TDG-206ENST00000540956 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
TDG-206ENST00000540956 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
TDG-206ENST00000540956 TUSC1Q2TAM9 212 aa12.09□□□□□ -0.47
TDG-206ENST00000540956 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
TDG-206ENST00000540956 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
TDG-206ENST00000540956 HRCP23327 699 aa12.08□□□□□ -0.48
TDG-206ENST00000540956 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
TDG-206ENST00000540956 ZNF697Q5TEC3 545 aa12.08□□□□□ -0.48
TDG-206ENST00000540956 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
TDG-206ENST00000540956 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
TDG-206ENST00000540956 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
TDG-206ENST00000540956 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
TDG-206ENST00000540956 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
TDG-206ENST00000540956 NUTM2BA6NNL0 878 aaPredicted RBP12.05□□□□□ -0.48
TDG-206ENST00000540956 NUTM2EB1AL46 878 aaPredicted RBP12.05□□□□□ -0.48
TDG-206ENST00000540956 GFRA3O60609 400 aa12.05□□□□□ -0.48
TDG-206ENST00000540956 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
TDG-206ENST00000540956 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
TDG-206ENST00000540956 NUTM2AQ8IVF1 878 aaPredicted RBP12.05□□□□□ -0.48
TDG-206ENST00000540956 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
TDG-206ENST00000540956 PTPRNQ16849 979 aa12.04□□□□□ -0.48
TDG-206ENST00000540956 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
TDG-206ENST00000540956 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
TDG-206ENST00000540956 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
TDG-206ENST00000540956 QPCTQ16769 361 aa12.03□□□□□ -0.48
TDG-206ENST00000540956 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
TDG-206ENST00000540956 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
TDG-206ENST00000540956 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
TDG-206ENST00000540956 TRIM32Q13049 653 aa12.02□□□□□ -0.49
TDG-206ENST00000540956 CFAP99D6REC4 459 aa12.01□□□□□ -0.49
TDG-206ENST00000540956 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
TDG-206ENST00000540956 LILRB3O75022 631 aa12.01□□□□□ -0.49
TDG-206ENST00000540956 TSC1Q92574 1164 aa12□□□□□ -0.49
TDG-206ENST00000540956 PRR20EP86478 221 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 PRR20CP86479 221 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 PRR20DP86480 221 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 PRR20BP86481 221 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 PRR20AP86496 221 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
TDG-206ENST00000540956 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
TDG-206ENST00000540956 FOXC1Q12948 553 aa11.97□□□□□ -0.49
TDG-206ENST00000540956 TNFRSF10AO00220 468 aa11.96□□□□□ -0.49
TDG-206ENST00000540956 GDF9O60383 454 aa11.96□□□□□ -0.49
TDG-206ENST00000540956 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
TDG-206ENST00000540956 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
TDG-206ENST00000540956 Q6ZNB5 142 aa11.96□□□□□ -0.49
TDG-206ENST00000540956 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
TDG-206ENST00000540956 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
TDG-206ENST00000540956 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
TDG-206ENST00000540956 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
TDG-206ENST00000540956 PROCA1Q8NCQ7 364 aaPredicted RBP11.94□□□□□ -0.5
TDG-206ENST00000540956 CTHP32929 405 aa11.93□□□□□ -0.5
TDG-206ENST00000540956 WNT7BP56706 349 aa11.93□□□□□ -0.5
TDG-206ENST00000540956 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
TDG-206ENST00000540956 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
TDG-206ENST00000540956 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
TDG-206ENST00000540956 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
TDG-206ENST00000540956 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
TDG-206ENST00000540956 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
TDG-206ENST00000540956 WNT7AO00755 349 aa11.9□□□□□ -0.5
TDG-206ENST00000540956 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
TDG-206ENST00000540956 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
TDG-206ENST00000540956 F12P00748 615 aaPredicted RBP11.88□□□□□ -0.51
TDG-206ENST00000540956 CYP4X1Q8N118 509 aa11.88□□□□□ -0.51
TDG-206ENST00000540956 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
TDG-206ENST00000540956 SKOR1P84550 965 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1045.5 ms