RNA–Protein interactions for RNA: ENST00000540956.1

TDG-206, Transcript of thymine DNA glycosylase, humanhuman

TSL 2

Gene TDG, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-206ENST00000540956 AEBP2Q6ZN18 517 aaPredicted RBP31.19■■■□□ 2.58
TDG-206ENST00000540956 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
TDG-206ENST00000540956 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
TDG-206ENST00000540956 PHF23Q9BUL5 403 aaPredicted RBP26.53■■□□□ 1.84
TDG-206ENST00000540956 FOXD1Q16676 465 aa24.65■■□□□ 1.54
TDG-206ENST00000540956 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
TDG-206ENST00000540956 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
TDG-206ENST00000540956 ADRA2BP18089 450 aa23.48■■□□□ 1.35
TDG-206ENST00000540956 PIAS4Q8N2W9 510 aaPredicted RBP23.24■■□□□ 1.31
TDG-206ENST00000540956 MSH5O43196 834 aa22.92■■□□□ 1.26
TDG-206ENST00000540956 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
TDG-206ENST00000540956 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
TDG-206ENST00000540956 MAPK8IP2Q13387 824 aaPredicted RBP21.36■■□□□ 1.01
TDG-206ENST00000540956 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
TDG-206ENST00000540956 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
TDG-206ENST00000540956 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
TDG-206ENST00000540956 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
TDG-206ENST00000540956 KCNA4P22459 653 aa20.73■□□□□ 0.91
TDG-206ENST00000540956 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
TDG-206ENST00000540956 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
TDG-206ENST00000540956 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
TDG-206ENST00000540956 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
TDG-206ENST00000540956 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
TDG-206ENST00000540956 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
TDG-206ENST00000540956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.747e-8■■■■□ 25
TDG-206ENST00000540956 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
TDG-206ENST00000540956 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
TDG-206ENST00000540956 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
TDG-206ENST00000540956 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
TDG-206ENST00000540956 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
TDG-206ENST00000540956 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
TDG-206ENST00000540956 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
TDG-206ENST00000540956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
TDG-206ENST00000540956 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
TDG-206ENST00000540956 ZBTB22O15209 634 aa19.03■□□□□ 0.64
TDG-206ENST00000540956 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
TDG-206ENST00000540956 APLP2Q06481 763 aa18.95■□□□□ 0.62
TDG-206ENST00000540956 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
TDG-206ENST00000540956 CAPN15O75808 1086 aa18.82■□□□□ 0.6
TDG-206ENST00000540956 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
TDG-206ENST00000540956 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
TDG-206ENST00000540956 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
TDG-206ENST00000540956 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
TDG-206ENST00000540956 ATXN8OSP0DMR3 200 aa18.56■□□□□ 0.56
TDG-206ENST00000540956 DSG3P32926 999 aa18.52■□□□□ 0.56
TDG-206ENST00000540956 ATF5Q9Y2D1 282 aaPredicted RBP18.49■□□□□ 0.55
TDG-206ENST00000540956 ABCB7O75027 752 aa18.42■□□□□ 0.54
TDG-206ENST00000540956 POLA2Q14181 598 aa18.28■□□□□ 0.52
TDG-206ENST00000540956 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
TDG-206ENST00000540956 FBLN2P98095 1184 aa17.85■□□□□ 0.45
TDG-206ENST00000540956 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
TDG-206ENST00000540956 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
TDG-206ENST00000540956 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
TDG-206ENST00000540956 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
TDG-206ENST00000540956 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
TDG-206ENST00000540956 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
TDG-206ENST00000540956 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
TDG-206ENST00000540956 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
TDG-206ENST00000540956 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
TDG-206ENST00000540956 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
TDG-206ENST00000540956 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
TDG-206ENST00000540956 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
TDG-206ENST00000540956 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
TDG-206ENST00000540956 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
TDG-206ENST00000540956 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
TDG-206ENST00000540956 FKBP8Q14318 412 aa17■□□□□ 0.31
TDG-206ENST00000540956 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
TDG-206ENST00000540956 PROM2Q8N271 834 aa16.87■□□□□ 0.29
TDG-206ENST00000540956 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
TDG-206ENST00000540956 POTEHQ6S545 545 aa16.8■□□□□ 0.28
TDG-206ENST00000540956 PRR29P0C7W0 189 aa16.79■□□□□ 0.28
TDG-206ENST00000540956 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.27
TDG-206ENST00000540956 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
TDG-206ENST00000540956 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
TDG-206ENST00000540956 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
TDG-206ENST00000540956 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
TDG-206ENST00000540956 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
TDG-206ENST00000540956 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
TDG-206ENST00000540956 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
TDG-206ENST00000540956 MIER1Q8N108 512 aa16.37■□□□□ 0.21
TDG-206ENST00000540956 PLCD3Q8N3E9 789 aa16.35■□□□□ 0.21
TDG-206ENST00000540956 HAX1O00165 279 aa16.32■□□□□ 0.2
TDG-206ENST00000540956 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
TDG-206ENST00000540956 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
TDG-206ENST00000540956 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
TDG-206ENST00000540956 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
TDG-206ENST00000540956 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
TDG-206ENST00000540956 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
TDG-206ENST00000540956 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
TDG-206ENST00000540956 EVX2Q03828 476 aa16.07■□□□□ 0.16
TDG-206ENST00000540956 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
TDG-206ENST00000540956 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
TDG-206ENST00000540956 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
TDG-206ENST00000540956 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
TDG-206ENST00000540956 NUBP1P53384 320 aa15.94■□□□□ 0.14
TDG-206ENST00000540956 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
TDG-206ENST00000540956 TSPYL2Q9H2G4 693 aaPredicted RBP15.94■□□□□ 0.14
TDG-206ENST00000540956 ZNF579Q8NAF0 562 aaKnown RBP15.92■□□□□ 0.14
TDG-206ENST00000540956 FAM212AQ96EL1 285 aa15.9■□□□□ 0.14
TDG-206ENST00000540956 SPOCK2Q92563 424 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms