RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
SFI1-229ENST00000540643 TICAM2Q86XR7 235 aa15.7■□□□□ 0.1
SFI1-229ENST00000540643 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
SFI1-229ENST00000540643 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
SFI1-229ENST00000540643 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
SFI1-229ENST00000540643 FEZ1Q99689 392 aa15.68■□□□□ 0.1
SFI1-229ENST00000540643 MCM5P33992 734 aa15.68■□□□□ 0.1
SFI1-229ENST00000540643 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
SFI1-229ENST00000540643 GABPB1Q06547 395 aaPredicted RBP15.67■□□□□ 0.1
SFI1-229ENST00000540643 PDE3BQ13370 1112 aa15.67■□□□□ 0.1
SFI1-229ENST00000540643 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
SFI1-229ENST00000540643 ACBD3Q9H3P7 528 aa15.66■□□□□ 0.1
SFI1-229ENST00000540643 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
SFI1-229ENST00000540643 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
SFI1-229ENST00000540643 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.13e-10■■■■■ 66.5
SFI1-229ENST00000540643 LMAN1P49257 510 aa15.66■□□□□ 0.1
SFI1-229ENST00000540643 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 RIPK4P57078 832 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 RPAINQ86UA6 219 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 DYDC1Q8WWB3 177 aa15.65■□□□□ 0.1
SFI1-229ENST00000540643 NEFHP12036 1026 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 MAP2K2P36507 400 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 FOXD1Q16676 465 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 CDR1P51861 262 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 NUCB2P80303 420 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
SFI1-229ENST00000540643 A0A1B0GUL7 405 aa15.63■□□□□ 0.09
SFI1-229ENST00000540643 SYCE3A1L190 88 aa15.63■□□□□ 0.09
SFI1-229ENST00000540643 TXLNBQ8N3L3 684 aa15.63■□□□□ 0.09
SFI1-229ENST00000540643 NOLC1Q14978 699 aaKnown RBP eCLIP15.62■□□□□ 0.09
SFI1-229ENST00000540643 C16orf45Q96MC5 204 aaPredicted RBP15.62■□□□□ 0.09
SFI1-229ENST00000540643 TBC1D2Q9BYX2 928 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 GOLGA6L19H0YKK7 550 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 TPM3P06753 285 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 BIRC2Q13490 618 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
SFI1-229ENST00000540643 TMCO3Q6UWJ1 677 aa15.61■□□□□ 0.09
SFI1-229ENST00000540643 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
SFI1-229ENST00000540643 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
SFI1-229ENST00000540643 EFCC1Q9HA90 598 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 TPM1P09493 284 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 E2F4Q16254 413 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 MYRIPQ8NFW9 859 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 CCDC34Q96HJ3 373 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 TMCO5BA8MYB1 307 aa15.6■□□□□ 0.09
SFI1-229ENST00000540643 NEBLO76041 1014 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 NF2P35240 595 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 KRBA2Q6ZNG9 492 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 ST18O60284 1047 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 KIAA0754O94854 1291 aa15.59■□□□□ 0.09
SFI1-229ENST00000540643 ZSCAN20P17040 1043 aaPredicted RBP15.59■□□□□ 0.09
SFI1-229ENST00000540643 BECN2A8MW95 431 aa15.58■□□□□ 0.09
SFI1-229ENST00000540643 BMS1Q14692 1282 aaKnown RBP15.58■□□□□ 0.09
SFI1-229ENST00000540643 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.09
SFI1-229ENST00000540643 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.09
SFI1-229ENST00000540643 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.09
SFI1-229ENST00000540643 TRIM5Q9C035 493 aa15.58■□□□□ 0.08
SFI1-229ENST00000540643 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
SFI1-229ENST00000540643 ZNF853P0CG23 659 aa15.57■□□□□ 0.08
SFI1-229ENST00000540643 EP400NLQ6ZTU2 488 aa15.57■□□□□ 0.08
SFI1-229ENST00000540643 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
SFI1-229ENST00000540643 CEP83Q9Y592 693 aa15.57■□□□□ 0.08
SFI1-229ENST00000540643 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SFI1-229ENST00000540643 TMED8Q6PL24 325 aaPredicted RBP15.57■□□□□ 0.08
SFI1-229ENST00000540643 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
SFI1-229ENST00000540643 GBP6Q6ZN66 633 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
SFI1-229ENST00000540643 MBD3O95983 291 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 LIG1P18858 919 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 UBXN4Q92575 508 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 PANK3Q9H999 370 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 USP25Q9UHP3 1055 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
SFI1-229ENST00000540643 PLEKHD1A6NEE1 506 aa15.55■□□□□ 0.08
SFI1-229ENST00000540643 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
SFI1-229ENST00000540643 CNKSR2Q8WXI2 1034 aa15.55■□□□□ 0.08
SFI1-229ENST00000540643 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
SFI1-229ENST00000540643 SRRTQ9BXP5 876 aaKnown RBP15.55■□□□□ 0.08
SFI1-229ENST00000540643 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
SFI1-229ENST00000540643 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 MCCP23508 829 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.088e-7■■□□□ 14.2
SFI1-229ENST00000540643 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 PHLDB1Q86UU1 1377 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 CCDC172P0C7W6 258 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
SFI1-229ENST00000540643 AP1ARQ63HQ0 302 aa15.54■□□□□ 0.08
SFI1-229ENST00000540643 ICE2Q659A1 982 aa15.53■□□□□ 0.08
SFI1-229ENST00000540643 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
SFI1-229ENST00000540643 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
SFI1-229ENST00000540643 APBB1O00213 710 aa15.53■□□□□ 0.08
SFI1-229ENST00000540643 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
SFI1-229ENST00000540643 HS1BP3Q53T59 392 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms