RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 AXIN2Q9Y2T1 843 aa6.99□□□□□ -1.29
TSG101-205ENST00000540555 NCOA1Q15788 1441 aa6.99□□□□□ -1.29
TSG101-205ENST00000540555 MAGI2Q86UL8 1455 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 ABCA9Q8IUA7 1624 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 CARMIL1Q5VZK9 1371 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 PPP1R3GB7ZBB8 358 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 ARHGAP33O14559 1287 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 KCNK17Q96T54 332 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 ABCA8O94911 1581 aa6.98□□□□□ -1.29
TSG101-205ENST00000540555 ZMYM4Q5VZL5 1548 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 KIF27Q86VH2 1401 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 TTC13Q8NBP0 860 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 KIAA0556O60303 1618 aa6.97□□□□□ -1.29
TSG101-205ENST00000540555 DENND4BO75064 1496 aaPredicted RBP6.97□□□□□ -1.29
TSG101-205ENST00000540555 PRSS12P56730 875 aa6.96□□□□□ -1.3
TSG101-205ENST00000540555 CDCA7LQ96GN5 454 aa6.96□□□□□ -1.3
TSG101-205ENST00000540555 FAM198AQ9UFP1 575 aa6.96□□□□□ -1.3
TSG101-205ENST00000540555 RGS17Q9UGC6 210 aaPredicted RBP6.96□□□□□ -1.3
TSG101-205ENST00000540555 IRF6O14896 467 aa6.95□□□□□ -1.3
TSG101-205ENST00000540555 CEBPAP49715 358 aaPredicted RBP6.95□□□□□ -1.3
TSG101-205ENST00000540555 MAP2K5Q13163 448 aa6.95□□□□□ -1.3
TSG101-205ENST00000540555 PADI6Q6TGC4 694 aa6.95□□□□□ -1.3
TSG101-205ENST00000540555 ZBED2Q9BTP6 218 aa6.95□□□□□ -1.3
TSG101-205ENST00000540555 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
TSG101-205ENST00000540555 TSKSQ9UJT2 592 aa6.95□□□□□ -1.3
TSG101-205ENST00000540555 MINK1Q8N4C8 1332 aaPredicted RBP6.95□□□□□ -1.3
TSG101-205ENST00000540555 SIGLEC1Q9BZZ2 1709 aa6.94□□□□□ -1.3
TSG101-205ENST00000540555 TK2O00142 265 aa6.94□□□□□ -1.3
TSG101-205ENST00000540555 PROX2Q3B8N5 592 aa6.94□□□□□ -1.3
TSG101-205ENST00000540555 SLC4A5Q9BY07 1137 aa6.94□□□□□ -1.3
TSG101-205ENST00000540555 ZNF335Q9H4Z2 1342 aaPredicted RBP6.94□□□□□ -1.3
TSG101-205ENST00000540555 EFCAB5A4FU69 1503 aa6.93□□□□□ -1.3
TSG101-205ENST00000540555 ZFYVE16Q7Z3T8 1539 aa6.93□□□□□ -1.3
TSG101-205ENST00000540555 TRIM6-TRIM34B2RNG4 842 aa6.93□□□□□ -1.3
TSG101-205ENST00000540555 C3orf80F5H4A9 247 aa6.93□□□□□ -1.3
TSG101-205ENST00000540555 KRI1Q8N9T8 703 aaKnown RBP6.93□□□□□ -1.3
TSG101-205ENST00000540555 ATP10BO94823 1461 aa6.92□□□□□ -1.3
TSG101-205ENST00000540555 ONECUT3O60422 494 aaPredicted RBP6.92□□□□□ -1.3
TSG101-205ENST00000540555 FAM161AQ3B820 660 aa6.92□□□□□ -1.3
TSG101-205ENST00000540555 CCDC102AQ96A19 550 aa6.92□□□□□ -1.3
TSG101-205ENST00000540555 TRAPPC8Q9Y2L5 1435 aa6.92□□□□□ -1.3
TSG101-205ENST00000540555 RICTORQ6R327 1708 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 TOM1O60784 492 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 ADGRD1Q6QNK2 874 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 AK7Q96M32 723 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 VPS9D1Q9Y2B5 631 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
TSG101-205ENST00000540555 FER1L4A9Z1Z3 1794 aa6.9□□□□□ -1.3
TSG101-205ENST00000540555 HRO43593 1189 aa6.9□□□□□ -1.3
TSG101-205ENST00000540555 MLECQ14165 292 aa6.9□□□□□ -1.3
TSG101-205ENST00000540555 PHOX2BQ99453 314 aa6.9□□□□□ -1.3
TSG101-205ENST00000540555 C9orf84Q5VXU9 1444 aa6.9□□□□□ -1.31
TSG101-205ENST00000540555 ATP10AO60312 1499 aa6.9□□□□□ -1.31
TSG101-205ENST00000540555 BHMG1C9JSJ3 638 aaPredicted RBP6.89□□□□□ -1.31
TSG101-205ENST00000540555 TRIM66O15016 1216 aa6.89□□□□□ -1.31
TSG101-205ENST00000540555 EYA1Q99502 592 aa6.89□□□□□ -1.31
TSG101-205ENST00000540555 KIAA1468Q9P260 1216 aa6.89□□□□□ -1.31
TSG101-205ENST00000540555 PLA2R1Q13018 1463 aa6.89□□□□□ -1.31
TSG101-205ENST00000540555 TCOF1Q13428 1488 aaKnown RBP6.89□□□□□ -1.31
TSG101-205ENST00000540555 SETD1BQ9UPS6 1966 aaKnown RBP6.88□□□□□ -1.31
TSG101-205ENST00000540555 GOLGA3Q08378 1498 aa6.88□□□□□ -1.31
TSG101-205ENST00000540555 NUDT18Q6ZVK8 323 aa6.88□□□□□ -1.31
TSG101-205ENST00000540555 METTL3Q86U44 580 aaKnown RBP6.88□□□□□ -1.31
TSG101-205ENST00000540555 PXYLP1Q8TE99 480 aa6.88□□□□□ -1.31
TSG101-205ENST00000540555 TATDN2Q93075 761 aa6.88□□□□□ -1.31
TSG101-205ENST00000540555 RABGEF1Q9UJ41 708 aa6.88□□□□□ -1.31
TSG101-205ENST00000540555 ALKQ9UM73 1620 aa6.87□□□□□ -1.31
TSG101-205ENST00000540555 NPATQ14207 1427 aa6.87□□□□□ -1.31
TSG101-205ENST00000540555 RGS20O76081 388 aa6.87□□□□□ -1.31
TSG101-205ENST00000540555 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
TSG101-205ENST00000540555 PACS2Q86VP3 889 aa6.87□□□□□ -1.31
TSG101-205ENST00000540555 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 PTPRKQ15262 1439 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 OATP04181 439 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 AMHR2Q16671 573 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 IFFO2Q5TF58 517 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 PNMA3Q9UL41 463 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 CAMSAP1Q5T5Y3 1602 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 HECW1Q76N89 1606 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 CPS1P31327 1500 aa6.86□□□□□ -1.31
TSG101-205ENST00000540555 SMAPO00193 183 aa6.85□□□□□ -1.31
TSG101-205ENST00000540555 PDE4DQ08499 809 aa6.85□□□□□ -1.31
TSG101-205ENST00000540555 RBM46Q8TBY0 533 aaKnown RBP6.85□□□□□ -1.31
TSG101-205ENST00000540555 REREQ9P2R6 1566 aa6.84□□□□□ -1.31
TSG101-205ENST00000540555 NBPF26B4DH59 902 aa6.84□□□□□ -1.31
TSG101-205ENST00000540555 BRPF1P55201 1214 aaPredicted RBP6.84□□□□□ -1.31
TSG101-205ENST00000540555 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
TSG101-205ENST00000540555 TMUB1Q9BVT8 246 aa6.84□□□□□ -1.31
TSG101-205ENST00000540555 REPIN1Q9BWE0 567 aaKnown RBP6.84□□□□□ -1.31
TSG101-205ENST00000540555 AGLP35573 1532 aa6.84□□□□□ -1.31
TSG101-205ENST00000540555 CFAP74Q9C0B2 1584 aa6.83□□□□□ -1.32
TSG101-205ENST00000540555 RCCD1A6NED2 376 aa6.83□□□□□ -1.32
TSG101-205ENST00000540555 SEPT9Q9UHD8 586 aaPredicted RBP6.83□□□□□ -1.32
TSG101-205ENST00000540555 CNTLNQ9NXG0 1405 aa6.83□□□□□ -1.32
TSG101-205ENST00000540555 SCAPERQ9BY12 1400 aa6.82□□□□□ -1.32
TSG101-205ENST00000540555 SHANK2Q9UPX8 1470 aa6.81□□□□□ -1.32
TSG101-205ENST00000540555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms