RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
LRP6-205ENST00000540527 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
LRP6-205ENST00000540527 GJA5P36382 358 aa13.62□□□□□ -0.23
LRP6-205ENST00000540527 FOSBP53539 338 aa13.62□□□□□ -0.23
LRP6-205ENST00000540527 EGFLAMQ63HQ2 1017 aa13.62□□□□□ -0.23
LRP6-205ENST00000540527 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
LRP6-205ENST00000540527 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
LRP6-205ENST00000540527 NOVA2Q9UNW9 492 aaKnown RBP13.62□□□□□ -0.23
LRP6-205ENST00000540527 TAGLNQ01995 201 aaKnown RBP13.6□□□□□ -0.23
LRP6-205ENST00000540527 CSPP1Q1MSJ5 1256 aa13.6□□□□□ -0.23
LRP6-205ENST00000540527 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
LRP6-205ENST00000540527 SCAMP3O14828 347 aaKnown RBP13.59□□□□□ -0.23
LRP6-205ENST00000540527 IRX6P78412 446 aaPredicted RBP13.59□□□□□ -0.23
LRP6-205ENST00000540527 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
LRP6-205ENST00000540527 SDE2Q6IQ49 451 aa13.59□□□□□ -0.23
LRP6-205ENST00000540527 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
LRP6-205ENST00000540527 NEFLP07196 543 aa13.58□□□□□ -0.24
LRP6-205ENST00000540527 IGBP1P78318 339 aa13.58□□□□□ -0.24
LRP6-205ENST00000540527 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
LRP6-205ENST00000540527 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
LRP6-205ENST00000540527 hCG_2014768A0A024R1R8 64 aa13.57□□□□□ -0.24
LRP6-205ENST00000540527 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
LRP6-205ENST00000540527 SLAIN2Q9P270 581 aa13.57□□□□□ -0.24
LRP6-205ENST00000540527 COL19A1Q14993 1142 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 PTPROQ16827 1216 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 UPF1Q92900 1129 aaKnown RBP eCLIP13.56□□□□□ -0.24
LRP6-205ENST00000540527 KCNB2Q92953 911 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
LRP6-205ENST00000540527 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 KLHL42Q9P2K6 505 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
LRP6-205ENST00000540527 LZTS3O60299 673 aaPredicted RBP13.55□□□□□ -0.24
LRP6-205ENST00000540527 MCCD1P59942 119 aaPredicted RBP13.55□□□□□ -0.24
LRP6-205ENST00000540527 BACH2Q9BYV9 841 aa13.55□□□□□ -0.24
LRP6-205ENST00000540527 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
LRP6-205ENST00000540527 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
LRP6-205ENST00000540527 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
LRP6-205ENST00000540527 MAGEC2Q9UBF1 373 aaPredicted RBP13.54□□□□□ -0.24
LRP6-205ENST00000540527 RAD51AP2Q09MP3 1159 aa13.53□□□□□ -0.24
LRP6-205ENST00000540527 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
LRP6-205ENST00000540527 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
LRP6-205ENST00000540527 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
LRP6-205ENST00000540527 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
LRP6-205ENST00000540527 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
LRP6-205ENST00000540527 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
LRP6-205ENST00000540527 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
LRP6-205ENST00000540527 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.25
LRP6-205ENST00000540527 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
LRP6-205ENST00000540527 MORC4Q8TE76 937 aa13.52□□□□□ -0.25
LRP6-205ENST00000540527 TINF2Q9BSI4 451 aa13.52□□□□□ -0.25
LRP6-205ENST00000540527 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
LRP6-205ENST00000540527 PRKAG2Q9UGJ0 569 aa13.52□□□□□ -0.25
LRP6-205ENST00000540527 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
LRP6-205ENST00000540527 MRPL58Q14197 206 aaKnown RBP13.51□□□□□ -0.25
LRP6-205ENST00000540527 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
LRP6-205ENST00000540527 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
LRP6-205ENST00000540527 PSME1Q06323 249 aa13.5□□□□□ -0.25
LRP6-205ENST00000540527 TEX2Q8IWB9 1127 aa13.5□□□□□ -0.25
LRP6-205ENST00000540527 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
LRP6-205ENST00000540527 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
LRP6-205ENST00000540527 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
LRP6-205ENST00000540527 EVI5O60447 810 aa13.49□□□□□ -0.25
LRP6-205ENST00000540527 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
LRP6-205ENST00000540527 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
LRP6-205ENST00000540527 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
LRP6-205ENST00000540527 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
LRP6-205ENST00000540527 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
LRP6-205ENST00000540527 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
LRP6-205ENST00000540527 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
LRP6-205ENST00000540527 NUTM1Q86Y26 1132 aa13.48□□□□□ -0.25
LRP6-205ENST00000540527 EGFL7Q9UHF1 273 aa13.48□□□□□ -0.25
LRP6-205ENST00000540527 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
LRP6-205ENST00000540527 KIF3CO14782 793 aa13.46□□□□□ -0.25
LRP6-205ENST00000540527 MAP3K7O43318 606 aa13.46□□□□□ -0.25
LRP6-205ENST00000540527 PARNO95453 639 aaKnown RBP13.46□□□□□ -0.25
LRP6-205ENST00000540527 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
LRP6-205ENST00000540527 NLGN1Q8N2Q7 840 aa13.46□□□□□ -0.25
LRP6-205ENST00000540527 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
LRP6-205ENST00000540527 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
LRP6-205ENST00000540527 CD46P15529 392 aa13.45□□□□□ -0.26
LRP6-205ENST00000540527 ANAPC15P60006 121 aa13.45□□□□□ -0.26
LRP6-205ENST00000540527 C1orf216Q8TAB5 229 aa13.45□□□□□ -0.26
LRP6-205ENST00000540527 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
LRP6-205ENST00000540527 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
LRP6-205ENST00000540527 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
LRP6-205ENST00000540527 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
LRP6-205ENST00000540527 EPAS1Q99814 870 aa13.44□□□□□ -0.26
LRP6-205ENST00000540527 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L21D6R901 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 NDUFV2P19404 249 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 MAPK1P28482 360 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms