RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
C16orf62-212ENST00000540240 ATP10AO60312 1499 aa12.65□□□□□ -0.38
C16orf62-212ENST00000540240 HSPA2P54652 639 aa12.65□□□□□ -0.38
C16orf62-212ENST00000540240 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
C16orf62-212ENST00000540240 ONECUT3O60422 494 aaPredicted RBP12.64□□□□□ -0.39
C16orf62-212ENST00000540240 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
C16orf62-212ENST00000540240 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
C16orf62-212ENST00000540240 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
C16orf62-212ENST00000540240 NBR1Q14596 966 aa12.63□□□□□ -0.39
C16orf62-212ENST00000540240 FER1L4A9Z1Z3 1794 aa12.62□□□□□ -0.39
C16orf62-212ENST00000540240 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
C16orf62-212ENST00000540240 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
C16orf62-212ENST00000540240 RGS20O76081 388 aa12.61□□□□□ -0.39
C16orf62-212ENST00000540240 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
C16orf62-212ENST00000540240 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
C16orf62-212ENST00000540240 PDIA6Q15084 440 aa12.61□□□□□ -0.39
C16orf62-212ENST00000540240 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
C16orf62-212ENST00000540240 CLIP1P30622 1438 aa12.61□□□□□ -0.39
C16orf62-212ENST00000540240 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
C16orf62-212ENST00000540240 SIGLEC1Q9BZZ2 1709 aa12.6□□□□□ -0.39
C16orf62-212ENST00000540240 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
C16orf62-212ENST00000540240 MAP3K7O43318 606 aa12.59□□□□□ -0.39
C16orf62-212ENST00000540240 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
C16orf62-212ENST00000540240 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
C16orf62-212ENST00000540240 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
C16orf62-212ENST00000540240 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
C16orf62-212ENST00000540240 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
C16orf62-212ENST00000540240 KIF14Q15058 1648 aa12.59□□□□□ -0.39
C16orf62-212ENST00000540240 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
C16orf62-212ENST00000540240 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
C16orf62-212ENST00000540240 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
C16orf62-212ENST00000540240 CEBPAP49715 358 aaPredicted RBP12.56□□□□□ -0.4
C16orf62-212ENST00000540240 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
C16orf62-212ENST00000540240 KDM5CP41229 1560 aa12.56□□□□□ -0.4
C16orf62-212ENST00000540240 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
C16orf62-212ENST00000540240 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
C16orf62-212ENST00000540240 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
C16orf62-212ENST00000540240 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
C16orf62-212ENST00000540240 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
C16orf62-212ENST00000540240 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
C16orf62-212ENST00000540240 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
C16orf62-212ENST00000540240 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
C16orf62-212ENST00000540240 C3orf80F5H4A9 247 aa12.53□□□□□ -0.4
C16orf62-212ENST00000540240 SMAPO00193 183 aa12.53□□□□□ -0.4
C16orf62-212ENST00000540240 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.4
C16orf62-212ENST00000540240 E2F4Q16254 413 aa12.52□□□□□ -0.41
C16orf62-212ENST00000540240 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
C16orf62-212ENST00000540240 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
C16orf62-212ENST00000540240 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
C16orf62-212ENST00000540240 PACS2Q86VP3 889 aa12.51□□□□□ -0.41
C16orf62-212ENST00000540240 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
C16orf62-212ENST00000540240 AGLP35573 1532 aa12.51□□□□□ -0.41
C16orf62-212ENST00000540240 DIP2CQ9Y2E4 1556 aa12.51□□□□□ -0.41
C16orf62-212ENST00000540240 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
C16orf62-212ENST00000540240 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
C16orf62-212ENST00000540240 CFAP44Q96MT7 982 aa12.5□□□□□ -0.41
C16orf62-212ENST00000540240 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
C16orf62-212ENST00000540240 PTPRTO14522 1441 aa12.49□□□□□ -0.41
C16orf62-212ENST00000540240 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
C16orf62-212ENST00000540240 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
C16orf62-212ENST00000540240 KCNC4Q03721 635 aa12.49□□□□□ -0.41
C16orf62-212ENST00000540240 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
C16orf62-212ENST00000540240 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
C16orf62-212ENST00000540240 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
C16orf62-212ENST00000540240 PRSS12P56730 875 aa12.48□□□□□ -0.41
C16orf62-212ENST00000540240 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
C16orf62-212ENST00000540240 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
C16orf62-212ENST00000540240 ABCC1P33527 1531 aa12.47□□□□□ -0.41
C16orf62-212ENST00000540240 CDHR5Q9HBB8 845 aa12.47□□□□□ -0.41
C16orf62-212ENST00000540240 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
C16orf62-212ENST00000540240 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
C16orf62-212ENST00000540240 C3P01024 1663 aa12.46□□□□□ -0.41
C16orf62-212ENST00000540240 SAMD7Q7Z3H4 446 aa12.46□□□□□ -0.41
C16orf62-212ENST00000540240 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
C16orf62-212ENST00000540240 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
C16orf62-212ENST00000540240 OSBPP22059 807 aa12.44□□□□□ -0.42
C16orf62-212ENST00000540240 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
C16orf62-212ENST00000540240 PPP4CP60510 307 aa12.43□□□□□ -0.42
C16orf62-212ENST00000540240 WDR70Q9NW82 654 aa12.43□□□□□ -0.42
C16orf62-212ENST00000540240 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
C16orf62-212ENST00000540240 NPATQ14207 1427 aa12.43□□□□□ -0.42
C16orf62-212ENST00000540240 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
C16orf62-212ENST00000540240 SPAG9O60271 1321 aaKnown RBP12.42□□□□□ -0.42
C16orf62-212ENST00000540240 IQSEC2Q5JU85 1478 aa12.42□□□□□ -0.42
C16orf62-212ENST00000540240 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
C16orf62-212ENST00000540240 TATDN2Q93075 761 aa12.42□□□□□ -0.42
C16orf62-212ENST00000540240 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
C16orf62-212ENST00000540240 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
C16orf62-212ENST00000540240 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
C16orf62-212ENST00000540240 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
C16orf62-212ENST00000540240 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
C16orf62-212ENST00000540240 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
C16orf62-212ENST00000540240 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
C16orf62-212ENST00000540240 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
C16orf62-212ENST00000540240 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
C16orf62-212ENST00000540240 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
C16orf62-212ENST00000540240 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
C16orf62-212ENST00000540240 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
C16orf62-212ENST00000540240 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
C16orf62-212ENST00000540240 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms