RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
CCDC60-204ENST00000539847 SLC52A1Q9NWF4 448 aa10.74□□□□□ -0.69
CCDC60-204ENST00000539847 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-204ENST00000539847 ABCC5O15440 1437 aa10.74□□□□□ -0.69
CCDC60-204ENST00000539847 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
CCDC60-204ENST00000539847 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
CCDC60-204ENST00000539847 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-204ENST00000539847 RGS17Q9UGC6 210 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-204ENST00000539847 TMEM94Q12767 1356 aa10.73□□□□□ -0.69
CCDC60-204ENST00000539847 CEP152O94986 1710 aa10.72□□□□□ -0.69
CCDC60-204ENST00000539847 ANKRD30AQ9BXX3 1397 aa10.72□□□□□ -0.69
CCDC60-204ENST00000539847 NOS1P29475 1434 aa10.72□□□□□ -0.69
CCDC60-204ENST00000539847 TET3O43151 1660 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 DAPK1P53355 1430 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 IDI1Q13907 227 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.69
CCDC60-204ENST00000539847 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
CCDC60-204ENST00000539847 PIK3C2BO00750 1634 aa10.7□□□□□ -0.7
CCDC60-204ENST00000539847 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
CCDC60-204ENST00000539847 RYDENQ9NUL5 291 aaKnown RBP10.7□□□□□ -0.7
CCDC60-204ENST00000539847 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
CCDC60-204ENST00000539847 NWD1Q149M9 1564 aa10.69□□□□□ -0.7
CCDC60-204ENST00000539847 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
CCDC60-204ENST00000539847 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
CCDC60-204ENST00000539847 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
CCDC60-204ENST00000539847 MSH6P52701 1360 aa10.68□□□□□ -0.7
CCDC60-204ENST00000539847 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-204ENST00000539847 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-204ENST00000539847 PTPN23Q9H3S7 1636 aa10.68□□□□□ -0.7
CCDC60-204ENST00000539847 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
CCDC60-204ENST00000539847 CFAP65Q6ZU64 1925 aaKnown RBP10.67□□□□□ -0.7
CCDC60-204ENST00000539847 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
CCDC60-204ENST00000539847 ERICH6BQ5W0A0 696 aa10.67□□□□□ -0.7
CCDC60-204ENST00000539847 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
CCDC60-204ENST00000539847 ADGRL2O95490 1459 aa10.67□□□□□ -0.7
CCDC60-204ENST00000539847 JCADQ9P266 1359 aa10.66□□□□□ -0.7
CCDC60-204ENST00000539847 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
CCDC60-204ENST00000539847 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
CCDC60-204ENST00000539847 SLAIN2Q9P270 581 aa10.66□□□□□ -0.7
CCDC60-204ENST00000539847 ZFYVE9O95405 1425 aa10.66□□□□□ -0.7
CCDC60-204ENST00000539847 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
CCDC60-204ENST00000539847 POTEAQ6S8J7 498 aa10.65□□□□□ -0.7
CCDC60-204ENST00000539847 SLC26A8Q96RN1 970 aa10.65□□□□□ -0.7
CCDC60-204ENST00000539847 TBX22Q9Y458 520 aa10.65□□□□□ -0.7
CCDC60-204ENST00000539847 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
CCDC60-204ENST00000539847 ROBO1Q9Y6N7 1651 aa10.65□□□□□ -0.7
CCDC60-204ENST00000539847 PIK3R4Q99570 1358 aa10.65□□□□□ -0.71
CCDC60-204ENST00000539847 NEFLP07196 543 aa10.64□□□□□ -0.71
CCDC60-204ENST00000539847 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
CCDC60-204ENST00000539847 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC60-204ENST00000539847 SPATA31A6Q5VVP1 1343 aa10.63□□□□□ -0.71
CCDC60-204ENST00000539847 SETD5Q9C0A6 1442 aa10.63□□□□□ -0.71
CCDC60-204ENST00000539847 ANKRD50Q9ULJ7 1429 aa10.63□□□□□ -0.71
CCDC60-204ENST00000539847 RIMS2Q9UQ26 1411 aa10.61□□□□□ -0.71
CCDC60-204ENST00000539847 PSEN1P49768 467 aa10.61□□□□□ -0.71
CCDC60-204ENST00000539847 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
CCDC60-204ENST00000539847 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
CCDC60-204ENST00000539847 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC60-204ENST00000539847 ZNF772Q68DY9 489 aaPredicted RBP10.6□□□□□ -0.71
CCDC60-204ENST00000539847 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
CCDC60-204ENST00000539847 C19orf44Q9H6X5 657 aa10.6□□□□□ -0.71
CCDC60-204ENST00000539847 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
CCDC60-204ENST00000539847 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
CCDC60-204ENST00000539847 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
CCDC60-204ENST00000539847 FANCIQ9NVI1 1328 aa10.59□□□□□ -0.71
CCDC60-204ENST00000539847 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CCDC60-204ENST00000539847 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
CCDC60-204ENST00000539847 DCCP43146 1447 aa10.58□□□□□ -0.72
CCDC60-204ENST00000539847 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
CCDC60-204ENST00000539847 TMEM131LA2VDJ0 1609 aa10.58□□□□□ -0.72
CCDC60-204ENST00000539847 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CCDC60-204ENST00000539847 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
CCDC60-204ENST00000539847 ADAMTS13Q76LX8 1427 aa10.58□□□□□ -0.72
CCDC60-204ENST00000539847 ROCK1Q13464 1354 aa10.57□□□□□ -0.72
CCDC60-204ENST00000539847 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
CCDC60-204ENST00000539847 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
CCDC60-204ENST00000539847 ANP32CO43423 234 aa10.56□□□□□ -0.72
CCDC60-204ENST00000539847 ATF3P18847 181 aa10.56□□□□□ -0.72
CCDC60-204ENST00000539847 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
CCDC60-204ENST00000539847 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
CCDC60-204ENST00000539847 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
CCDC60-204ENST00000539847 GCC2Q8IWJ2 1684 aa10.54□□□□□ -0.72
CCDC60-204ENST00000539847 UNC13BO14795 1591 aa10.54□□□□□ -0.72
CCDC60-204ENST00000539847 MAP3K13O43283 966 aa10.54□□□□□ -0.72
CCDC60-204ENST00000539847 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
CCDC60-204ENST00000539847 TRPM2O94759 1503 aa10.53□□□□□ -0.72
CCDC60-204ENST00000539847 PPP1R37O75864 691 aa10.53□□□□□ -0.72
CCDC60-204ENST00000539847 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
CCDC60-204ENST00000539847 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
CCDC60-204ENST00000539847 LRP6O75581 1613 aa10.53□□□□□ -0.72
CCDC60-204ENST00000539847 SHPRHQ149N8 1683 aa10.53□□□□□ -0.72
CCDC60-204ENST00000539847 RXRBP28702 533 aa10.52□□□□□ -0.73
CCDC60-204ENST00000539847 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.73
CCDC60-204ENST00000539847 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
CCDC60-204ENST00000539847 BRINP3Q76B58 766 aa10.52□□□□□ -0.73
CCDC60-204ENST00000539847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC60-204ENST00000539847 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
CCDC60-204ENST00000539847 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms