RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 AP1G2O75843 785 aa13.17□□□□□ -0.3
TRAV11-201ENST00000539512 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
TRAV11-201ENST00000539512 THSD4Q6ZMP0 1018 aa13.17□□□□□ -0.3
TRAV11-201ENST00000539512 APBB1O00213 710 aa13.16□□□□□ -0.3
TRAV11-201ENST00000539512 HELBQ8NG08 1087 aaPredicted RBP13.16□□□□□ -0.3
TRAV11-201ENST00000539512 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
TRAV11-201ENST00000539512 PCDHGC3Q9UN70 934 aa13.16□□□□□ -0.3
TRAV11-201ENST00000539512 NR1I2O75469 434 aa13.15□□□□□ -0.3
TRAV11-201ENST00000539512 APLP1P51693 650 aa13.15□□□□□ -0.3
TRAV11-201ENST00000539512 MORN1Q5T089 497 aa13.15□□□□□ -0.3
TRAV11-201ENST00000539512 MCM6Q14566 821 aa13.14□□□□□ -0.31
TRAV11-201ENST00000539512 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
TRAV11-201ENST00000539512 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
TRAV11-201ENST00000539512 RAD21O60216 631 aa13.13□□□□□ -0.31
TRAV11-201ENST00000539512 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
TRAV11-201ENST00000539512 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
TRAV11-201ENST00000539512 PRM3Q9NNZ6 103 aa13.12□□□□□ -0.31
TRAV11-201ENST00000539512 PTPN5P54829 565 aa13.11□□□□□ -0.31
TRAV11-201ENST00000539512 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
TRAV11-201ENST00000539512 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
TRAV11-201ENST00000539512 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
TRAV11-201ENST00000539512 FBXO31Q5XUX0 539 aaPredicted RBP13.08□□□□□ -0.32
TRAV11-201ENST00000539512 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
TRAV11-201ENST00000539512 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
TRAV11-201ENST00000539512 BLOC1S3Q6QNY0 202 aa13.07□□□□□ -0.32
TRAV11-201ENST00000539512 PRR7Q8TB68 274 aa13.07□□□□□ -0.32
TRAV11-201ENST00000539512 COPS2P61201 443 aa13.06□□□□□ -0.32
TRAV11-201ENST00000539512 SCUBE3Q8IX30 993 aa13.06□□□□□ -0.32
TRAV11-201ENST00000539512 SNRKQ9NRH2 765 aa13.06□□□□□ -0.32
TRAV11-201ENST00000539512 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
TRAV11-201ENST00000539512 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
TRAV11-201ENST00000539512 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
TRAV11-201ENST00000539512 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
TRAV11-201ENST00000539512 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
TRAV11-201ENST00000539512 RNF19BQ6ZMZ0 732 aa13.03□□□□□ -0.32
TRAV11-201ENST00000539512 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
TRAV11-201ENST00000539512 BRICD5Q6PL45 260 aa13.01□□□□□ -0.33
TRAV11-201ENST00000539512 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
TRAV11-201ENST00000539512 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
TRAV11-201ENST00000539512 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
TRAV11-201ENST00000539512 A6NJR5 290 aa12.99□□□□□ -0.33
TRAV11-201ENST00000539512 SOCS7O14512 581 aa12.99□□□□□ -0.33
TRAV11-201ENST00000539512 DESI1Q6ICB0 168 aa12.98□□□□□ -0.33
TRAV11-201ENST00000539512 SPSB2Q99619 263 aa12.98□□□□□ -0.33
TRAV11-201ENST00000539512 MTRQ99707 1265 aa12.97□□□□□ -0.33
TRAV11-201ENST00000539512 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
TRAV11-201ENST00000539512 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
TRAV11-201ENST00000539512 IL21Q9HBE4 155 aa12.96□□□□□ -0.33
TRAV11-201ENST00000539512 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
TRAV11-201ENST00000539512 THAP11Q96EK4 314 aa12.95□□□□□ -0.34
TRAV11-201ENST00000539512 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
TRAV11-201ENST00000539512 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
TRAV11-201ENST00000539512 ZPR1O75312 459 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 ABL2P42684 1182 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
TRAV11-201ENST00000539512 JUNDP17535 347 aa12.93□□□□□ -0.34
TRAV11-201ENST00000539512 MSS51Q4VC12 460 aa12.92□□□□□ -0.34
TRAV11-201ENST00000539512 ADH1BP00325 375 aa12.91□□□□□ -0.34
TRAV11-201ENST00000539512 LYPD8Q6UX82 237 aa12.91□□□□□ -0.34
TRAV11-201ENST00000539512 HMX1Q9NP08 348 aaPredicted RBP12.91□□□□□ -0.34
TRAV11-201ENST00000539512 TRAK2O60296 914 aa12.9□□□□□ -0.34
TRAV11-201ENST00000539512 TLL1O43897 1013 aa12.89□□□□□ -0.35
TRAV11-201ENST00000539512 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
TRAV11-201ENST00000539512 PER1O15534 1290 aaPredicted RBP12.88□□□□□ -0.35
TRAV11-201ENST00000539512 CTHP32929 405 aa12.88□□□□□ -0.35
TRAV11-201ENST00000539512 PTPRNQ16849 979 aa12.88□□□□□ -0.35
TRAV11-201ENST00000539512 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
TRAV11-201ENST00000539512 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
TRAV11-201ENST00000539512 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
TRAV11-201ENST00000539512 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
TRAV11-201ENST00000539512 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
TRAV11-201ENST00000539512 CCNYL3P0C7X3 344 aa12.85□□□□□ -0.35
TRAV11-201ENST00000539512 NR6A1Q15406 480 aa12.85□□□□□ -0.35
TRAV11-201ENST00000539512 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
TRAV11-201ENST00000539512 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
TRAV11-201ENST00000539512 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
TRAV11-201ENST00000539512 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
TRAV11-201ENST00000539512 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
TRAV11-201ENST00000539512 KCNC4Q03721 635 aa12.83□□□□□ -0.36
TRAV11-201ENST00000539512 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
TRAV11-201ENST00000539512 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
TRAV11-201ENST00000539512 MMP16P51512 607 aa12.82□□□□□ -0.36
TRAV11-201ENST00000539512 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
TRAV11-201ENST00000539512 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
TRAV11-201ENST00000539512 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
TRAV11-201ENST00000539512 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
TRAV11-201ENST00000539512 ARMC2Q8NEN0 867 aa12.79□□□□□ -0.36
TRAV11-201ENST00000539512 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
TRAV11-201ENST00000539512 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
TRAV11-201ENST00000539512 GGCXP38435 758 aa12.78□□□□□ -0.36
TRAV11-201ENST00000539512 S1PR4O95977 384 aa12.77□□□□□ -0.37
TRAV11-201ENST00000539512 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
TRAV11-201ENST00000539512 EVA1BQ9NVM1 165 aa12.77□□□□□ -0.37
TRAV11-201ENST00000539512 FKBPLQ9UIM3 349 aa12.77□□□□□ -0.37
TRAV11-201ENST00000539512 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
TRAV11-201ENST00000539512 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
TRAV11-201ENST00000539512 ARID3AQ99856 593 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms