RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 PARD3Q8TEW0 1356 aa15.17■□□□□ 0.02
CTCFL-212ENST00000539382 SLIT1O75093 1534 aa15.17■□□□□ 0.02
CTCFL-212ENST00000539382 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
CTCFL-212ENST00000539382 POGKQ9P215 609 aa15.16■□□□□ 0.02
CTCFL-212ENST00000539382 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
CTCFL-212ENST00000539382 RALBP1Q15311 655 aa15.15■□□□□ 0.02
CTCFL-212ENST00000539382 THEMISQ8N1K5 641 aaPredicted RBP15.15■□□□□ 0.02
CTCFL-212ENST00000539382 KTN1Q86UP2 1357 aaKnown RBP15.15■□□□□ 0.02
CTCFL-212ENST00000539382 PLEKHG1Q9ULL1 1385 aa15.15■□□□□ 0.02
CTCFL-212ENST00000539382 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
CTCFL-212ENST00000539382 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
CTCFL-212ENST00000539382 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
CTCFL-212ENST00000539382 CEP170BQ9Y4F5 1589 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-212ENST00000539382 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
CTCFL-212ENST00000539382 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
CTCFL-212ENST00000539382 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
CTCFL-212ENST00000539382 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
CTCFL-212ENST00000539382 DLC1Q96QB1 1528 aa15.13■□□□□ 0.01
CTCFL-212ENST00000539382 MED14O60244 1454 aa15.13■□□□□ 0.01
CTCFL-212ENST00000539382 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
CTCFL-212ENST00000539382 SRPK2P78362 688 aaKnown RBP15.1■□□□□ 0.01
CTCFL-212ENST00000539382 PUS7Q96PZ0 661 aaKnown RBP15.1■□□□□ 0.01
CTCFL-212ENST00000539382 TECPR2O15040 1411 aa15.1■□□□□ 0.01
CTCFL-212ENST00000539382 PTPRUQ92729 1446 aa15.1■□□□□ 0.01
CTCFL-212ENST00000539382 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
CTCFL-212ENST00000539382 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
CTCFL-212ENST00000539382 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
CTCFL-212ENST00000539382 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
CTCFL-212ENST00000539382 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
CTCFL-212ENST00000539382 NLRP13Q86W25 1043 aa15.08■□□□□ 0
CTCFL-212ENST00000539382 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
CTCFL-212ENST00000539382 KNDC1Q76NI1 1749 aa15.07■□□□□ 0
CTCFL-212ENST00000539382 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
CTCFL-212ENST00000539382 TBX22Q9Y458 520 aa15.06■□□□□ 0
CTCFL-212ENST00000539382 CPS1P31327 1500 aa15.06■□□□□ 0
CTCFL-212ENST00000539382 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
CTCFL-212ENST00000539382 SETD1BQ9UPS6 1966 aaKnown RBP15.06■□□□□ 0
CTCFL-212ENST00000539382 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
CTCFL-212ENST00000539382 SIRT1Q96EB6 747 aa15.06■□□□□ 0
CTCFL-212ENST00000539382 PPP2R1AP30153 589 aa15.05■□□□□ -0
CTCFL-212ENST00000539382 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
CTCFL-212ENST00000539382 AMOTL2Q9Y2J4 779 aa15.04■□□□□ -0
CTCFL-212ENST00000539382 CD163L1Q9NR16 1453 aa15.04■□□□□ -0
CTCFL-212ENST00000539382 A0A1W2PP64 1363 aa15.03■□□□□ -0
CTCFL-212ENST00000539382 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
CTCFL-212ENST00000539382 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
CTCFL-212ENST00000539382 CABP1Q9NZU7 370 aa15.03■□□□□ -0
CTCFL-212ENST00000539382 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
CTCFL-212ENST00000539382 NCKAP5LQ9HCH0 1330 aa15.02■□□□□ -0
CTCFL-212ENST00000539382 FKBP8Q14318 412 aa15.02□□□□□ -0.01
CTCFL-212ENST00000539382 ANKLE2Q86XL3 938 aa15.02□□□□□ -0.01
CTCFL-212ENST00000539382 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.02□□□□□ -0.01
CTCFL-212ENST00000539382 NINLQ9Y2I6 1382 aa15□□□□□ -0.01
CTCFL-212ENST00000539382 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
CTCFL-212ENST00000539382 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
CTCFL-212ENST00000539382 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
CTCFL-212ENST00000539382 KCNA6P17658 529 aa14.99□□□□□ -0.01
CTCFL-212ENST00000539382 CGNL1Q0VF96 1302 aa14.98□□□□□ -0.01
CTCFL-212ENST00000539382 NUDT16Q96DE0 195 aaKnown RBP14.97□□□□□ -0.01
CTCFL-212ENST00000539382 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
CTCFL-212ENST00000539382 TNNT2P45379 298 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-212ENST00000539382 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
CTCFL-212ENST00000539382 TERF2IPQ9NYB0 399 aa14.96□□□□□ -0.01
CTCFL-212ENST00000539382 PTCH1Q13635 1447 aa14.96□□□□□ -0.01
CTCFL-212ENST00000539382 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
CTCFL-212ENST00000539382 NUTM2FA1L443 756 aa14.96□□□□□ -0.01
CTCFL-212ENST00000539382 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
CTCFL-212ENST00000539382 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
CTCFL-212ENST00000539382 ATP7BP35670 1465 aa14.95□□□□□ -0.02
CTCFL-212ENST00000539382 FYB1O15117 783 aa14.95□□□□□ -0.02
CTCFL-212ENST00000539382 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
CTCFL-212ENST00000539382 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
CTCFL-212ENST00000539382 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
CTCFL-212ENST00000539382 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
CTCFL-212ENST00000539382 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
CTCFL-212ENST00000539382 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
CTCFL-212ENST00000539382 CPSF1Q10570 1443 aaKnown RBP14.93□□□□□ -0.02
CTCFL-212ENST00000539382 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-212ENST00000539382 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
CTCFL-212ENST00000539382 NPHP4O75161 1426 aaPredicted RBP14.93□□□□□ -0.02
CTCFL-212ENST00000539382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTCFL-212ENST00000539382 CHD2O14647 1828 aaKnown RBP14.91□□□□□ -0.02
CTCFL-212ENST00000539382 NSD2O96028 1365 aa14.9□□□□□ -0.02
CTCFL-212ENST00000539382 MTHFSP49914 203 aa14.89□□□□□ -0.03
CTCFL-212ENST00000539382 HSPA2P54652 639 aa14.89□□□□□ -0.03
CTCFL-212ENST00000539382 CDC42BPGQ6DT37 1551 aa14.89□□□□□ -0.03
CTCFL-212ENST00000539382 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
CTCFL-212ENST00000539382 BLMP54132 1417 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-212ENST00000539382 NKTRP30414 1462 aaKnown RBP14.88□□□□□ -0.03
CTCFL-212ENST00000539382 FBLN1P23142 703 aa14.87□□□□□ -0.03
CTCFL-212ENST00000539382 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
CTCFL-212ENST00000539382 POLR3AO14802 1390 aaPredicted RBP14.87□□□□□ -0.03
CTCFL-212ENST00000539382 TOPAZ1Q8N9V7 1692 aa14.87□□□□□ -0.03
CTCFL-212ENST00000539382 ACEP12821 1306 aa14.86□□□□□ -0.03
CTCFL-212ENST00000539382 NME9Q86XW9 330 aa14.86□□□□□ -0.03
CTCFL-212ENST00000539382 EDC4Q6P2E9 1401 aaKnown RBP14.86□□□□□ -0.03
CTCFL-212ENST00000539382 PLEKHG3A1L390 1219 aa14.86□□□□□ -0.03
CTCFL-212ENST00000539382 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
CTCFL-212ENST00000539382 PMFBP1Q8TBY8 1022 aa14.85□□□□□ -0.03
CTCFL-212ENST00000539382 RGPD8O14715 1765 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms