RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
PRPF19-203ENST00000539180 AHDC1Q5TGY3 1603 aaPredicted RBP21.68■■□□□ 1.06
PRPF19-203ENST00000539180 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
PRPF19-203ENST00000539180 PHLPP1O60346 1717 aa21.65■■□□□ 1.06
PRPF19-203ENST00000539180 COL16A1Q07092 1604 aaPredicted RBP21.65■■□□□ 1.06
PRPF19-203ENST00000539180 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.06
PRPF19-203ENST00000539180 ATF3P18847 181 aa21.64■■□□□ 1.05
PRPF19-203ENST00000539180 WAPLQ7Z5K2 1190 aa21.64■■□□□ 1.05
PRPF19-203ENST00000539180 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
PRPF19-203ENST00000539180 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.05
PRPF19-203ENST00000539180 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
PRPF19-203ENST00000539180 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
PRPF19-203ENST00000539180 QRICH2Q9H0J4 1663 aa21.62■■□□□ 1.05
PRPF19-203ENST00000539180 HSPA1LP34931 641 aa21.61■■□□□ 1.05
PRPF19-203ENST00000539180 NBPF1Q3BBV0 1214 aa21.61■■□□□ 1.05
PRPF19-203ENST00000539180 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
PRPF19-203ENST00000539180 TRAK1Q9UPV9 953 aa21.6■■□□□ 1.05
PRPF19-203ENST00000539180 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
PRPF19-203ENST00000539180 KIF1AQ12756 1690 aa21.59■■□□□ 1.05
PRPF19-203ENST00000539180 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
PRPF19-203ENST00000539180 BRINP3Q76B58 766 aa21.57■■□□□ 1.04
PRPF19-203ENST00000539180 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
PRPF19-203ENST00000539180 TULP4Q9NRJ4 1543 aa21.55■■□□□ 1.04
PRPF19-203ENST00000539180 TOPAZ1Q8N9V7 1692 aa21.55■■□□□ 1.04
PRPF19-203ENST00000539180 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
PRPF19-203ENST00000539180 SHPRHQ149N8 1683 aa21.53■■□□□ 1.04
PRPF19-203ENST00000539180 ITSN1Q15811 1721 aa21.53■■□□□ 1.04
PRPF19-203ENST00000539180 POGKQ9P215 609 aa21.52■■□□□ 1.04
PRPF19-203ENST00000539180 SAFB2Q14151 953 aaKnown RBP eCLIP21.51■■□□□ 1.03
PRPF19-203ENST00000539180 ATP7BP35670 1465 aa21.5■■□□□ 1.03
PRPF19-203ENST00000539180 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
PRPF19-203ENST00000539180 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
PRPF19-203ENST00000539180 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
PRPF19-203ENST00000539180 MINK1Q8N4C8 1332 aaPredicted RBP21.48■■□□□ 1.03
PRPF19-203ENST00000539180 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
PRPF19-203ENST00000539180 PXDNQ92626 1479 aa21.47■■□□□ 1.03
PRPF19-203ENST00000539180 CENPJQ9HC77 1338 aaPredicted RBP21.47■■□□□ 1.03
PRPF19-203ENST00000539180 ORAI2Q96SN7 254 aa21.46■■□□□ 1.03
PRPF19-203ENST00000539180 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
PRPF19-203ENST00000539180 WASLO00401 505 aaPredicted RBP21.43■■□□□ 1.02
PRPF19-203ENST00000539180 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
PRPF19-203ENST00000539180 SBNO2Q9Y2G9 1366 aa21.43■■□□□ 1.02
PRPF19-203ENST00000539180 COL22A1Q8NFW1 1626 aaPredicted RBP21.43■■□□□ 1.02
PRPF19-203ENST00000539180 TRPM3Q9HCF6 1732 aaPredicted RBP21.42■■□□□ 1.02
PRPF19-203ENST00000539180 JCADQ9P266 1359 aa21.42■■□□□ 1.02
PRPF19-203ENST00000539180 SOS2Q07890 1332 aaPredicted RBP21.41■■□□□ 1.02
PRPF19-203ENST00000539180 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
PRPF19-203ENST00000539180 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
PRPF19-203ENST00000539180 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
PRPF19-203ENST00000539180 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
PRPF19-203ENST00000539180 NPHP3Q7Z494 1330 aa21.38■■□□□ 1.01
PRPF19-203ENST00000539180 LRP6O75581 1613 aa21.37■■□□□ 1.01
PRPF19-203ENST00000539180 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
PRPF19-203ENST00000539180 ALS2Q96Q42 1657 aa21.36■■□□□ 1.01
PRPF19-203ENST00000539180 ABCA3Q99758 1704 aa21.35■■□□□ 1.01
PRPF19-203ENST00000539180 PHF8Q9UPP1 1060 aa21.35■■□□□ 1.01
PRPF19-203ENST00000539180 CDK19Q9BWU1 502 aa21.33■■□□□ 1.01
PRPF19-203ENST00000539180 FOXO3O43524 673 aa21.32■■□□□ 1
PRPF19-203ENST00000539180 USP47Q96K76 1375 aa21.32■■□□□ 1
PRPF19-203ENST00000539180 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
PRPF19-203ENST00000539180 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
PRPF19-203ENST00000539180 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
PRPF19-203ENST00000539180 POLR3AO14802 1390 aaPredicted RBP21.31■■□□□ 1
PRPF19-203ENST00000539180 AKAP12Q02952 1782 aa21.31■■□□□ 1
PRPF19-203ENST00000539180 TNS3Q68CZ2 1445 aa21.3■■□□□ 1
PRPF19-203ENST00000539180 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
PRPF19-203ENST00000539180 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
PRPF19-203ENST00000539180 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
PRPF19-203ENST00000539180 EVC2Q86UK5 1308 aa21.29■■□□□ 1
PRPF19-203ENST00000539180 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
PRPF19-203ENST00000539180 SBNO1A3KN83 1393 aa21.28■■□□□ 1
PRPF19-203ENST00000539180 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
PRPF19-203ENST00000539180 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
PRPF19-203ENST00000539180 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
PRPF19-203ENST00000539180 TESK2Q96S53 571 aa21.26■□□□□ 0.99
PRPF19-203ENST00000539180 CABP2Q9NPB3 220 aa21.26■□□□□ 0.99
PRPF19-203ENST00000539180 CCDC61Q9Y6R9 512 aa21.26■□□□□ 0.99
PRPF19-203ENST00000539180 SPATA31A3Q5VYP0 1347 aa21.26■□□□□ 0.99
PRPF19-203ENST00000539180 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
PRPF19-203ENST00000539180 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
PRPF19-203ENST00000539180 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
PRPF19-203ENST00000539180 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
PRPF19-203ENST00000539180 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
PRPF19-203ENST00000539180 PHRF1Q9P1Y6 1649 aaKnown RBP21.22■□□□□ 0.99
PRPF19-203ENST00000539180 DISP3Q9P2K9 1392 aa21.22■□□□□ 0.99
PRPF19-203ENST00000539180 MYOM1P52179 1685 aa21.21■□□□□ 0.99
PRPF19-203ENST00000539180 ACEP12821 1306 aa21.2■□□□□ 0.98
PRPF19-203ENST00000539180 ARHGEF10O15013 1369 aa21.2■□□□□ 0.98
PRPF19-203ENST00000539180 PSME1Q06323 249 aa21.19■□□□□ 0.98
PRPF19-203ENST00000539180 USP6P35125 1406 aa21.19■□□□□ 0.98
PRPF19-203ENST00000539180 CD163L1Q9NR16 1453 aa21.19■□□□□ 0.98
PRPF19-203ENST00000539180 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
PRPF19-203ENST00000539180 NGDNQ8NEJ9 315 aaKnown RBP21.18■□□□□ 0.98
PRPF19-203ENST00000539180 CPSF1Q10570 1443 aaKnown RBP21.18■□□□□ 0.98
PRPF19-203ENST00000539180 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
PRPF19-203ENST00000539180 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
PRPF19-203ENST00000539180 BRD4O60885 1362 aaPredicted RBP21.16■□□□□ 0.98
PRPF19-203ENST00000539180 PUS7Q96PZ0 661 aaKnown RBP21.16■□□□□ 0.98
PRPF19-203ENST00000539180 CABP1Q9NZU7 370 aa21.14■□□□□ 0.97
PRPF19-203ENST00000539180 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms