RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 HSP90AA2PQ14568 343 aaPredicted RBP21.81■■□□□ 1.08
C2CD3-213ENST00000539061 WDR63Q8IWG1 891 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 MYH16Q9H6N6 1097 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 TTC37Q6PGP7 1564 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 SPHKAPQ2M3C7 1700 aa21.79■■□□□ 1.08
C2CD3-213ENST00000539061 GRPEL1Q9HAV7 217 aa21.79■■□□□ 1.08
C2CD3-213ENST00000539061 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
C2CD3-213ENST00000539061 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
C2CD3-213ENST00000539061 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
C2CD3-213ENST00000539061 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
C2CD3-213ENST00000539061 BCL2L13Q9BXK5 485 aa21.78■■□□□ 1.08
C2CD3-213ENST00000539061 HSCBQ8IWL3 235 aa21.77■■□□□ 1.08
C2CD3-213ENST00000539061 PKNOX2Q96KN3 472 aa21.77■■□□□ 1.08
C2CD3-213ENST00000539061 RTEL1-TNFRSF6BF6WH68 1400 aa21.77■■□□□ 1.08
C2CD3-213ENST00000539061 MVPQ14764 893 aaKnown RBP21.77■■□□□ 1.07
C2CD3-213ENST00000539061 ESPNB1AK53 854 aa21.76■■□□□ 1.07
C2CD3-213ENST00000539061 TRPM2O94759 1503 aa21.75■■□□□ 1.07
C2CD3-213ENST00000539061 CEP152O94986 1710 aa21.75■■□□□ 1.07
C2CD3-213ENST00000539061 ERVK-7P63135 1459 aa21.75■■□□□ 1.07
C2CD3-213ENST00000539061 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
C2CD3-213ENST00000539061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
C2CD3-213ENST00000539061 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
C2CD3-213ENST00000539061 KANK1Q14678 1352 aa21.73■■□□□ 1.07
C2CD3-213ENST00000539061 ZKSCAN2Q63HK3 967 aa21.72■■□□□ 1.07
C2CD3-213ENST00000539061 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
C2CD3-213ENST00000539061 PTPRTO14522 1441 aa21.72■■□□□ 1.07
C2CD3-213ENST00000539061 IQSEC2Q5JU85 1478 aa21.71■■□□□ 1.07
C2CD3-213ENST00000539061 VSIG10Q8N0Z9 540 aa21.71■■□□□ 1.07
C2CD3-213ENST00000539061 FTSJ3Q8IY81 847 aaKnown RBP21.71■■□□□ 1.07
C2CD3-213ENST00000539061 DZIP1LQ8IYY4 767 aaKnown RBP21.71■■□□□ 1.07
C2CD3-213ENST00000539061 KIAA1210Q9ULL0 1709 aa21.71■■□□□ 1.07
C2CD3-213ENST00000539061 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
C2CD3-213ENST00000539061 HDAC1Q13547 482 aaPredicted RBP21.69■■□□□ 1.06
C2CD3-213ENST00000539061 DDIT3P35638 169 aa21.68■■□□□ 1.06
C2CD3-213ENST00000539061 CFAP70Q5T0N1 1121 aa21.68■■□□□ 1.06
C2CD3-213ENST00000539061 NCOA3Q9Y6Q9 1424 aa21.68■■□□□ 1.06
C2CD3-213ENST00000539061 ZCCHC11Q5TAX3 1644 aaKnown RBP21.68■■□□□ 1.06
C2CD3-213ENST00000539061 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
C2CD3-213ENST00000539061 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
C2CD3-213ENST00000539061 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
C2CD3-213ENST00000539061 SNX21Q969T3 373 aa21.67■■□□□ 1.06
C2CD3-213ENST00000539061 CIZ1Q9ULV3 898 aaPredicted RBP21.67■■□□□ 1.06
C2CD3-213ENST00000539061 ERBB4Q15303 1308 aa21.67■■□□□ 1.06
C2CD3-213ENST00000539061 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
C2CD3-213ENST00000539061 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
C2CD3-213ENST00000539061 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
C2CD3-213ENST00000539061 ZMYND15Q9H091 742 aa21.66■■□□□ 1.06
C2CD3-213ENST00000539061 SKOR2Q2VWA4 1001 aaPredicted RBP21.65■■□□□ 1.06
C2CD3-213ENST00000539061 GBP4Q96PP9 640 aa21.65■■□□□ 1.06
C2CD3-213ENST00000539061 PTMSP20962 102 aa21.64■■□□□ 1.06
C2CD3-213ENST00000539061 RBM25P49756 843 aaKnown RBP21.64■■□□□ 1.06
C2CD3-213ENST00000539061 TNPO1Q92973 898 aaKnown RBP21.64■■□□□ 1.06
C2CD3-213ENST00000539061 SMC5Q8IY18 1101 aa21.64■■□□□ 1.05
C2CD3-213ENST00000539061 CFAP53Q96M91 514 aa21.64■■□□□ 1.05
C2CD3-213ENST00000539061 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.05
C2CD3-213ENST00000539061 DDX19BQ9UMR2 479 aa21.64■■□□□ 1.05
C2CD3-213ENST00000539061 SBNO2Q9Y2G9 1366 aa21.63■■□□□ 1.05
C2CD3-213ENST00000539061 EFCAB2Q5VUJ9 269 aa21.62■■□□□ 1.05
C2CD3-213ENST00000539061 TPM2P07951 284 aa21.62■■□□□ 1.05
C2CD3-213ENST00000539061 MTHFSP49914 203 aa21.61■■□□□ 1.05
C2CD3-213ENST00000539061 GAS2L3Q86XJ1 694 aa21.61■■□□□ 1.05
C2CD3-213ENST00000539061 SMC4Q9NTJ3 1288 aa21.6■■□□□ 1.05
C2CD3-213ENST00000539061 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
C2CD3-213ENST00000539061 RAB3GAP1Q15042 981 aa21.6■■□□□ 1.05
C2CD3-213ENST00000539061 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 MYOM2P54296 1465 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 PLCH2O75038 1416 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 TRIM27P14373 513 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
C2CD3-213ENST00000539061 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
C2CD3-213ENST00000539061 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
C2CD3-213ENST00000539061 TRAPPC8Q9Y2L5 1435 aa21.58■■□□□ 1.04
C2CD3-213ENST00000539061 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
C2CD3-213ENST00000539061 ATF7IPQ6VMQ6 1270 aa21.57■■□□□ 1.04
C2CD3-213ENST00000539061 ABCA6Q8N139 1617 aa21.56■■□□□ 1.04
C2CD3-213ENST00000539061 SLC12A5Q9H2X9 1139 aa21.56■■□□□ 1.04
C2CD3-213ENST00000539061 U2AF1L5P0DN76 240 aaPredicted RBP21.55■■□□□ 1.04
C2CD3-213ENST00000539061 U2AF1Q01081 240 aaKnown RBP eCLIP21.55■■□□□ 1.04
C2CD3-213ENST00000539061 TET3O43151 1660 aa21.55■■□□□ 1.04
C2CD3-213ENST00000539061 CCDC173Q0VFZ6 552 aa21.55■■□□□ 1.04
C2CD3-213ENST00000539061 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
C2CD3-213ENST00000539061 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
C2CD3-213ENST00000539061 MYO3AQ8NEV4 1616 aa21.54■■□□□ 1.04
C2CD3-213ENST00000539061 NUCB1Q02818 461 aa21.54■■□□□ 1.04
C2CD3-213ENST00000539061 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
C2CD3-213ENST00000539061 ABCC1P33527 1531 aa21.53■■□□□ 1.04
C2CD3-213ENST00000539061 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
C2CD3-213ENST00000539061 ZBTB40Q9NUA8 1239 aa21.52■■□□□ 1.04
C2CD3-213ENST00000539061 PPP1R9BQ96SB3 815 aa21.52■■□□□ 1.04
C2CD3-213ENST00000539061 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
C2CD3-213ENST00000539061 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
C2CD3-213ENST00000539061 ANP32BQ92688 251 aaKnown RBP21.51■■□□□ 1.03
C2CD3-213ENST00000539061 PDCL3Q9H2J4 239 aa21.51■■□□□ 1.03
C2CD3-213ENST00000539061 NOB1Q9ULX3 412 aaKnown RBP21.51■■□□□ 1.03
C2CD3-213ENST00000539061 GOLGA6L22H0YM25 854 aa21.5■■□□□ 1.03
C2CD3-213ENST00000539061 TMEM57Q8N5G2 664 aa21.5■■□□□ 1.03
C2CD3-213ENST00000539061 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 LNPKQ9C0E8 428 aa21.49■■□□□ 1.03
C2CD3-213ENST00000539061 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms