RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 AMPHP49418 695 aa11.84□□□□□ -0.51
GGA3-202ENST00000538886 NGLY1Q96IV0 654 aa11.84□□□□□ -0.51
GGA3-202ENST00000538886 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.51
GGA3-202ENST00000538886 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
GGA3-202ENST00000538886 NEFMP07197 916 aa11.83□□□□□ -0.52
GGA3-202ENST00000538886 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
GGA3-202ENST00000538886 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
GGA3-202ENST00000538886 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
GGA3-202ENST00000538886 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
GGA3-202ENST00000538886 COG3Q96JB2 828 aa11.81□□□□□ -0.52
GGA3-202ENST00000538886 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
GGA3-202ENST00000538886 BCORL1Q5H9F3 1711 aa11.81□□□□□ -0.52
GGA3-202ENST00000538886 CROCC2H7BZ55 1655 aa11.8□□□□□ -0.52
GGA3-202ENST00000538886 FBLN1P23142 703 aa11.8□□□□□ -0.52
GGA3-202ENST00000538886 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
GGA3-202ENST00000538886 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
GGA3-202ENST00000538886 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
GGA3-202ENST00000538886 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
GGA3-202ENST00000538886 PTPRTO14522 1441 aa11.79□□□□□ -0.52
GGA3-202ENST00000538886 ROBO2Q9HCK4 1378 aa11.79□□□□□ -0.52
GGA3-202ENST00000538886 ACEP12821 1306 aa11.78□□□□□ -0.52
GGA3-202ENST00000538886 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.52
GGA3-202ENST00000538886 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.52
GGA3-202ENST00000538886 TET3O43151 1660 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 NLRP2Q9NX02 1062 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 HSPA1LP34931 641 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 NME9Q86XW9 330 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 NLRP13Q86W25 1043 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
GGA3-202ENST00000538886 NPHP3Q7Z494 1330 aa11.76□□□□□ -0.53
GGA3-202ENST00000538886 MIER1Q8N108 512 aa11.75□□□□□ -0.53
GGA3-202ENST00000538886 PRAG1Q86YV5 1406 aa11.75□□□□□ -0.53
GGA3-202ENST00000538886 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
GGA3-202ENST00000538886 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
GGA3-202ENST00000538886 LRPPRCP42704 1394 aaKnown RBP11.75□□□□□ -0.53
GGA3-202ENST00000538886 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
GGA3-202ENST00000538886 RRS1Q15050 365 aaKnown RBP11.75□□□□□ -0.53
GGA3-202ENST00000538886 LRRC59Q96AG4 307 aaKnown RBP11.75□□□□□ -0.53
GGA3-202ENST00000538886 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
GGA3-202ENST00000538886 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
GGA3-202ENST00000538886 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
GGA3-202ENST00000538886 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
GGA3-202ENST00000538886 KIF7Q2M1P5 1343 aa11.74□□□□□ -0.53
GGA3-202ENST00000538886 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
GGA3-202ENST00000538886 E9PCH4 1651 aa11.74□□□□□ -0.53
GGA3-202ENST00000538886 TRPM2O94759 1503 aa11.74□□□□□ -0.53
GGA3-202ENST00000538886 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
GGA3-202ENST00000538886 ARXQ96QS3 562 aa11.73□□□□□ -0.53
GGA3-202ENST00000538886 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
GGA3-202ENST00000538886 CFAP53Q96M91 514 aa11.73□□□□□ -0.53
GGA3-202ENST00000538886 CLTCL1P53675 1640 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
GGA3-202ENST00000538886 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 C3P01024 1663 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 TOM1L2Q6ZVM7 507 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
GGA3-202ENST00000538886 UNC13BO14795 1591 aa11.72□□□□□ -0.53
GGA3-202ENST00000538886 SIGLEC1Q9BZZ2 1709 aa11.71□□□□□ -0.53
GGA3-202ENST00000538886 LMTK2Q8IWU2 1503 aa11.71□□□□□ -0.54
GGA3-202ENST00000538886 ABCC11Q96J66 1382 aa11.7□□□□□ -0.54
GGA3-202ENST00000538886 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
GGA3-202ENST00000538886 MROH1Q8NDA8 1641 aa11.7□□□□□ -0.54
GGA3-202ENST00000538886 SYNMO15061 1565 aa11.7□□□□□ -0.54
GGA3-202ENST00000538886 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
GGA3-202ENST00000538886 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
GGA3-202ENST00000538886 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
GGA3-202ENST00000538886 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
GGA3-202ENST00000538886 REREQ9P2R6 1566 aa11.69□□□□□ -0.54
GGA3-202ENST00000538886 PREX1Q8TCU6 1659 aa11.69□□□□□ -0.54
GGA3-202ENST00000538886 SPATA31D1Q6ZQQ2 1576 aa11.68□□□□□ -0.54
GGA3-202ENST00000538886 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
GGA3-202ENST00000538886 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
GGA3-202ENST00000538886 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
GGA3-202ENST00000538886 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
GGA3-202ENST00000538886 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
GGA3-202ENST00000538886 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
GGA3-202ENST00000538886 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
GGA3-202ENST00000538886 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
GGA3-202ENST00000538886 ADAMTS13Q76LX8 1427 aa11.67□□□□□ -0.54
GGA3-202ENST00000538886 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
GGA3-202ENST00000538886 NEFLP07196 543 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 DDX54Q8TDD1 881 aaKnown RBP11.66□□□□□ -0.54
GGA3-202ENST00000538886 HMOX1P09601 288 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 TESK2Q96S53 571 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 KIF1BO60333 1816 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
GGA3-202ENST00000538886 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
GGA3-202ENST00000538886 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
GGA3-202ENST00000538886 BTG4Q9NY30 223 aa11.65□□□□□ -0.54
GGA3-202ENST00000538886 ZFYVE9O95405 1425 aa11.65□□□□□ -0.55
GGA3-202ENST00000538886 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
GGA3-202ENST00000538886 MTHFSP49914 203 aa11.64□□□□□ -0.55
GGA3-202ENST00000538886 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
GGA3-202ENST00000538886 GCP02774 474 aa11.63□□□□□ -0.55
GGA3-202ENST00000538886 EMILIN1Q9Y6C2 1016 aa11.63□□□□□ -0.55
GGA3-202ENST00000538886 FBXO41Q8TF61 875 aa11.63□□□□□ -0.55
GGA3-202ENST00000538886 CCDC7Q96M83 1385 aa11.63□□□□□ -0.55
GGA3-202ENST00000538886 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms