RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TMEM2Q9UHN6 1383 aa19.84■□□□□ 0.77
ATL3-203ENST00000538786 ABCC11Q96J66 1382 aa19.83■□□□□ 0.77
ATL3-203ENST00000538786 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
ATL3-203ENST00000538786 USP32Q8NFA0 1604 aa19.83■□□□□ 0.76
ATL3-203ENST00000538786 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
ATL3-203ENST00000538786 UBR1Q8IWV7 1749 aa19.82■□□□□ 0.76
ATL3-203ENST00000538786 ATAD2Q6PL18 1390 aa19.82■□□□□ 0.76
ATL3-203ENST00000538786 SRPK2P78362 688 aaKnown RBP19.82■□□□□ 0.76
ATL3-203ENST00000538786 MINK1Q8N4C8 1332 aaPredicted RBP19.82■□□□□ 0.76
ATL3-203ENST00000538786 CGNL1Q0VF96 1302 aa19.8■□□□□ 0.76
ATL3-203ENST00000538786 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
ATL3-203ENST00000538786 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
ATL3-203ENST00000538786 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
ATL3-203ENST00000538786 CEBPAP49715 358 aaPredicted RBP19.78■□□□□ 0.76
ATL3-203ENST00000538786 METP08581 1390 aa19.78■□□□□ 0.76
ATL3-203ENST00000538786 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
ATL3-203ENST00000538786 MORC1Q86VD1 984 aa19.77■□□□□ 0.76
ATL3-203ENST00000538786 BCANQ96GW7 911 aa19.77■□□□□ 0.76
ATL3-203ENST00000538786 NSD2O96028 1365 aa19.77■□□□□ 0.76
ATL3-203ENST00000538786 C3P01024 1663 aa19.77■□□□□ 0.76
ATL3-203ENST00000538786 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
ATL3-203ENST00000538786 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
ATL3-203ENST00000538786 ERICH6BQ5W0A0 696 aa19.75■□□□□ 0.75
ATL3-203ENST00000538786 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
ATL3-203ENST00000538786 TECPR2O15040 1411 aa19.75■□□□□ 0.75
ATL3-203ENST00000538786 A0A1W2PP64 1363 aa19.75■□□□□ 0.75
ATL3-203ENST00000538786 WAPLQ7Z5K2 1190 aa19.74■□□□□ 0.75
ATL3-203ENST00000538786 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
ATL3-203ENST00000538786 PLEKHH1Q9ULM0 1364 aa19.74■□□□□ 0.75
ATL3-203ENST00000538786 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
ATL3-203ENST00000538786 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
ATL3-203ENST00000538786 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
ATL3-203ENST00000538786 PLEKHG1Q9ULL1 1385 aa19.73■□□□□ 0.75
ATL3-203ENST00000538786 ADAMTS13Q76LX8 1427 aa19.72■□□□□ 0.75
ATL3-203ENST00000538786 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
ATL3-203ENST00000538786 CD163L1Q9NR16 1453 aa19.71■□□□□ 0.75
ATL3-203ENST00000538786 LTKP29376 864 aa19.7■□□□□ 0.74
ATL3-203ENST00000538786 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
ATL3-203ENST00000538786 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
ATL3-203ENST00000538786 SLIT1O75093 1534 aa19.7■□□□□ 0.74
ATL3-203ENST00000538786 CPS1P31327 1500 aa19.7■□□□□ 0.74
ATL3-203ENST00000538786 ARHGAP23Q9P227 1491 aa19.7■□□□□ 0.74
ATL3-203ENST00000538786 RNF123Q5XPI4 1314 aa19.69■□□□□ 0.74
ATL3-203ENST00000538786 TXNDC2Q86VQ3 553 aa19.69■□□□□ 0.74
ATL3-203ENST00000538786 EID1Q9Y6B2 187 aa19.69■□□□□ 0.74
ATL3-203ENST00000538786 HDGFL2Q7Z4V5 671 aaPredicted RBP19.68■□□□□ 0.74
ATL3-203ENST00000538786 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
ATL3-203ENST00000538786 MED14O60244 1454 aa19.67■□□□□ 0.74
ATL3-203ENST00000538786 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
ATL3-203ENST00000538786 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
ATL3-203ENST00000538786 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
ATL3-203ENST00000538786 ATP7BP35670 1465 aa19.65■□□□□ 0.74
ATL3-203ENST00000538786 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.74
ATL3-203ENST00000538786 MTHFSP49914 203 aa19.63■□□□□ 0.73
ATL3-203ENST00000538786 CDCA7LQ96GN5 454 aa19.63■□□□□ 0.73
ATL3-203ENST00000538786 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
ATL3-203ENST00000538786 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
ATL3-203ENST00000538786 FYB1O15117 783 aa19.62■□□□□ 0.73
ATL3-203ENST00000538786 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
ATL3-203ENST00000538786 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
ATL3-203ENST00000538786 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
ATL3-203ENST00000538786 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
ATL3-203ENST00000538786 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
ATL3-203ENST00000538786 GGNBP2Q9H3C7 697 aa19.6■□□□□ 0.73
ATL3-203ENST00000538786 SHPRHQ149N8 1683 aa19.6■□□□□ 0.73
ATL3-203ENST00000538786 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
ATL3-203ENST00000538786 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
ATL3-203ENST00000538786 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
ATL3-203ENST00000538786 CPSF1Q10570 1443 aaKnown RBP19.58■□□□□ 0.73
ATL3-203ENST00000538786 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.72
ATL3-203ENST00000538786 ANKRD26Q9UPS8 1709 aa19.58■□□□□ 0.72
ATL3-203ENST00000538786 APAF1O14727 1248 aa19.57■□□□□ 0.72
ATL3-203ENST00000538786 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
ATL3-203ENST00000538786 DIP2AQ14689 1571 aa19.57■□□□□ 0.72
ATL3-203ENST00000538786 PTPRUQ92729 1446 aa19.57■□□□□ 0.72
ATL3-203ENST00000538786 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
ATL3-203ENST00000538786 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
ATL3-203ENST00000538786 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
ATL3-203ENST00000538786 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
ATL3-203ENST00000538786 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
ATL3-203ENST00000538786 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
ATL3-203ENST00000538786 PTCH1Q13635 1447 aa19.53■□□□□ 0.72
ATL3-203ENST00000538786 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
ATL3-203ENST00000538786 AMOTL2Q9Y2J4 779 aa19.53■□□□□ 0.72
ATL3-203ENST00000538786 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
ATL3-203ENST00000538786 KIF20BQ96Q89 1820 aa19.53■□□□□ 0.72
ATL3-203ENST00000538786 RUNDC1Q96C34 613 aa19.53■□□□□ 0.72
ATL3-203ENST00000538786 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
ATL3-203ENST00000538786 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
ATL3-203ENST00000538786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATL3-203ENST00000538786 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
ATL3-203ENST00000538786 COL3A1P02461 1466 aaPredicted RBP19.5■□□□□ 0.71
ATL3-203ENST00000538786 SLFN5Q08AF3 891 aa19.5■□□□□ 0.71
ATL3-203ENST00000538786 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
ATL3-203ENST00000538786 TRMT2AQ8IZ69 625 aaKnown RBP19.49■□□□□ 0.71
ATL3-203ENST00000538786 NCKAP5LQ9HCH0 1330 aa19.49■□□□□ 0.71
ATL3-203ENST00000538786 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
ATL3-203ENST00000538786 PNPLA6Q8IY17 1366 aa19.48■□□□□ 0.71
ATL3-203ENST00000538786 PIK3R4Q99570 1358 aa19.48■□□□□ 0.71
ATL3-203ENST00000538786 U2AF1L5P0DN76 240 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms