RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ADGRB1O14514 1584 aa14.54□□□□□ -0.08
CLIP1-210ENST00000538120 SLC52A1Q9NWF4 448 aa14.54□□□□□ -0.08
CLIP1-210ENST00000538120 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
CLIP1-210ENST00000538120 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
CLIP1-210ENST00000538120 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
CLIP1-210ENST00000538120 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
CLIP1-210ENST00000538120 ERVK-7P63135 1459 aa14.53□□□□□ -0.08
CLIP1-210ENST00000538120 LRPPRCP42704 1394 aaKnown RBP14.52□□□□□ -0.09
CLIP1-210ENST00000538120 MYO3AQ8NEV4 1616 aa14.51□□□□□ -0.09
CLIP1-210ENST00000538120 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
CLIP1-210ENST00000538120 CC2D1BQ5T0F9 858 aaKnown RBP14.51□□□□□ -0.09
CLIP1-210ENST00000538120 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
CLIP1-210ENST00000538120 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
CLIP1-210ENST00000538120 SBNO2Q9Y2G9 1366 aa14.5□□□□□ -0.09
CLIP1-210ENST00000538120 MYOM1P52179 1685 aa14.5□□□□□ -0.09
CLIP1-210ENST00000538120 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
CLIP1-210ENST00000538120 ZFYVE9O95405 1425 aa14.49□□□□□ -0.09
CLIP1-210ENST00000538120 TMEM131LA2VDJ0 1609 aa14.49□□□□□ -0.09
CLIP1-210ENST00000538120 TRAK1Q9UPV9 953 aa14.49□□□□□ -0.09
CLIP1-210ENST00000538120 ARHGEF40Q8TER5 1519 aa14.48□□□□□ -0.09
CLIP1-210ENST00000538120 CENPJQ9HC77 1338 aaPredicted RBP14.48□□□□□ -0.09
CLIP1-210ENST00000538120 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
CLIP1-210ENST00000538120 KDM5AP29375 1690 aaKnown RBP14.47□□□□□ -0.09
CLIP1-210ENST00000538120 CLTCQ00610 1675 aaKnown RBP14.46□□□□□ -0.09
CLIP1-210ENST00000538120 KNSTRNQ9Y448 316 aa14.46□□□□□ -0.1
CLIP1-210ENST00000538120 MLECQ14165 292 aa14.45□□□□□ -0.1
CLIP1-210ENST00000538120 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
CLIP1-210ENST00000538120 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
CLIP1-210ENST00000538120 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
CLIP1-210ENST00000538120 ASXL1Q8IXJ9 1541 aa14.43□□□□□ -0.1
CLIP1-210ENST00000538120 NPC1L1Q9UHC9 1359 aa14.43□□□□□ -0.1
CLIP1-210ENST00000538120 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
CLIP1-210ENST00000538120 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
CLIP1-210ENST00000538120 SENP3-EIF4A1A0A087X0R7 540 aa14.41□□□□□ -0.1
CLIP1-210ENST00000538120 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
CLIP1-210ENST00000538120 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
CLIP1-210ENST00000538120 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
CLIP1-210ENST00000538120 ARHGEF28Q8N1W1 1705 aaKnown RBP14.39□□□□□ -0.11
CLIP1-210ENST00000538120 A2ML1A8K2U0 1454 aa14.39□□□□□ -0.11
CLIP1-210ENST00000538120 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
CLIP1-210ENST00000538120 INSRP06213 1382 aa14.38□□□□□ -0.11
CLIP1-210ENST00000538120 TULP4Q9NRJ4 1543 aa14.37□□□□□ -0.11
CLIP1-210ENST00000538120 PUS7Q96PZ0 661 aaKnown RBP14.36□□□□□ -0.11
CLIP1-210ENST00000538120 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
CLIP1-210ENST00000538120 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
CLIP1-210ENST00000538120 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
CLIP1-210ENST00000538120 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
CLIP1-210ENST00000538120 ALKQ9UM73 1620 aa14.36□□□□□ -0.11
CLIP1-210ENST00000538120 STK26Q9P289 416 aa14.35□□□□□ -0.11
CLIP1-210ENST00000538120 PTPRMP28827 1452 aa14.35□□□□□ -0.11
CLIP1-210ENST00000538120 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
CLIP1-210ENST00000538120 FANCIQ9NVI1 1328 aa14.35□□□□□ -0.11
CLIP1-210ENST00000538120 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
CLIP1-210ENST00000538120 RIMS2Q9UQ26 1411 aa14.34□□□□□ -0.11
CLIP1-210ENST00000538120 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
CLIP1-210ENST00000538120 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
CLIP1-210ENST00000538120 SAFB2Q14151 953 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLIP1-210ENST00000538120 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
CLIP1-210ENST00000538120 ESF1Q9H501 851 aaKnown RBP14.32□□□□□ -0.12
CLIP1-210ENST00000538120 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
CLIP1-210ENST00000538120 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
CLIP1-210ENST00000538120 CABP2Q9NPB3 220 aa14.31□□□□□ -0.12
CLIP1-210ENST00000538120 PPP4R2Q9NY27 417 aa14.31□□□□□ -0.12
CLIP1-210ENST00000538120 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
CLIP1-210ENST00000538120 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
CLIP1-210ENST00000538120 TNRQ92752 1358 aa14.3□□□□□ -0.12
CLIP1-210ENST00000538120 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
CLIP1-210ENST00000538120 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
CLIP1-210ENST00000538120 SETD1AO15047 1707 aaKnown RBP14.28□□□□□ -0.12
CLIP1-210ENST00000538120 HAP1P54257 671 aaPredicted RBP14.27□□□□□ -0.12
CLIP1-210ENST00000538120 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
CLIP1-210ENST00000538120 NRXN3Q9Y4C0 1643 aa14.27□□□□□ -0.12
CLIP1-210ENST00000538120 MINK1Q8N4C8 1332 aaPredicted RBP14.27□□□□□ -0.12
CLIP1-210ENST00000538120 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
CLIP1-210ENST00000538120 POGKQ9P215 609 aa14.27□□□□□ -0.13
CLIP1-210ENST00000538120 USP32Q8NFA0 1604 aa14.27□□□□□ -0.13
CLIP1-210ENST00000538120 DLC1Q96QB1 1528 aa14.26□□□□□ -0.13
CLIP1-210ENST00000538120 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLIP1-210ENST00000538120 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLIP1-210ENST00000538120 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
CLIP1-210ENST00000538120 ABCC11Q96J66 1382 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
CLIP1-210ENST00000538120 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 METP08581 1390 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 WAPLQ7Z5K2 1190 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 POLR3AO14802 1390 aaPredicted RBP14.24□□□□□ -0.13
CLIP1-210ENST00000538120 NINLQ9Y2I6 1382 aa14.24□□□□□ -0.13
CLIP1-210ENST00000538120 CGNL1Q0VF96 1302 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
CLIP1-210ENST00000538120 CDK19Q9BWU1 502 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 ATAD2Q6PL18 1390 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 TMEM2Q9UHN6 1383 aa14.23□□□□□ -0.13
CLIP1-210ENST00000538120 UBR1Q8IWV7 1749 aa14.22□□□□□ -0.13
CLIP1-210ENST00000538120 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
CLIP1-210ENST00000538120 ZNF521Q96K83 1311 aa14.21□□□□□ -0.14
CLIP1-210ENST00000538120 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms