RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
PTCD2-211ENST00000536805 COG6Q9Y2V7 657 aa15.51■□□□□ 0.07
PTCD2-211ENST00000536805 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
PTCD2-211ENST00000536805 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
PTCD2-211ENST00000536805 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
PTCD2-211ENST00000536805 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
PTCD2-211ENST00000536805 EFCAB6Q5THR3 1501 aa15.49■□□□□ 0.07
PTCD2-211ENST00000536805 SEC24BO95487 1268 aa15.49■□□□□ 0.07
PTCD2-211ENST00000536805 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
PTCD2-211ENST00000536805 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
PTCD2-211ENST00000536805 RUNDC1Q96C34 613 aa15.49■□□□□ 0.07
PTCD2-211ENST00000536805 UPF2Q9HAU5 1272 aaKnown RBP15.49■□□□□ 0.07
PTCD2-211ENST00000536805 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
PTCD2-211ENST00000536805 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
PTCD2-211ENST00000536805 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
PTCD2-211ENST00000536805 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
PTCD2-211ENST00000536805 TBC1D32Q96NH3 1257 aa15.47■□□□□ 0.07
PTCD2-211ENST00000536805 ANTXR1Q9H6X2 564 aa15.47■□□□□ 0.07
PTCD2-211ENST00000536805 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
PTCD2-211ENST00000536805 L1TD1Q5T7N2 865 aaKnown RBP15.47■□□□□ 0.07
PTCD2-211ENST00000536805 ADGRB3O60242 1522 aa15.46■□□□□ 0.07
PTCD2-211ENST00000536805 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
PTCD2-211ENST00000536805 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
PTCD2-211ENST00000536805 ADGRF5Q8IZF2 1346 aa15.46■□□□□ 0.06
PTCD2-211ENST00000536805 LMTK2Q8IWU2 1503 aa15.46■□□□□ 0.06
PTCD2-211ENST00000536805 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 ZNF518AQ6AHZ1 1483 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 FANCAO15360 1455 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 AFAP1Q8N556 730 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 POGKQ9P215 609 aa15.45■□□□□ 0.06
PTCD2-211ENST00000536805 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
PTCD2-211ENST00000536805 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
PTCD2-211ENST00000536805 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
PTCD2-211ENST00000536805 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
PTCD2-211ENST00000536805 MORC1Q86VD1 984 aa15.43■□□□□ 0.06
PTCD2-211ENST00000536805 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
PTCD2-211ENST00000536805 TCP11L2Q8N4U5 519 aa15.43■□□□□ 0.06
PTCD2-211ENST00000536805 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
PTCD2-211ENST00000536805 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
PTCD2-211ENST00000536805 RLBP1P12271 317 aa15.41■□□□□ 0.06
PTCD2-211ENST00000536805 PPLO60437 1756 aa15.41■□□□□ 0.06
PTCD2-211ENST00000536805 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-211ENST00000536805 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-211ENST00000536805 ILDR1Q86SU0 546 aaPredicted RBP15.41■□□□□ 0.06
PTCD2-211ENST00000536805 TBC1D2Q9BYX2 928 aa15.41■□□□□ 0.06
PTCD2-211ENST00000536805 MYH16Q9H6N6 1097 aa15.41■□□□□ 0.06
PTCD2-211ENST00000536805 NSD2O96028 1365 aa15.4■□□□□ 0.06
PTCD2-211ENST00000536805 ADGRB1O14514 1584 aa15.4■□□□□ 0.06
PTCD2-211ENST00000536805 KIF3BO15066 747 aa15.39■□□□□ 0.05
PTCD2-211ENST00000536805 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
PTCD2-211ENST00000536805 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
PTCD2-211ENST00000536805 NOS1P29475 1434 aa15.38■□□□□ 0.05
PTCD2-211ENST00000536805 PUS7Q96PZ0 661 aaKnown RBP15.38■□□□□ 0.05
PTCD2-211ENST00000536805 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
PTCD2-211ENST00000536805 NEUROD2Q15784 382 aa15.36■□□□□ 0.05
PTCD2-211ENST00000536805 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
PTCD2-211ENST00000536805 TNNQ9UQP3 1299 aa15.36■□□□□ 0.05
PTCD2-211ENST00000536805 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
PTCD2-211ENST00000536805 C14orf93Q9H972 538 aaKnown RBP15.35■□□□□ 0.05
PTCD2-211ENST00000536805 KIDINS220Q9ULH0 1771 aa15.34■□□□□ 0.05
PTCD2-211ENST00000536805 MCM4P33991 863 aa15.34■□□□□ 0.05
PTCD2-211ENST00000536805 MTHFSP49914 203 aa15.34■□□□□ 0.05
PTCD2-211ENST00000536805 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
PTCD2-211ENST00000536805 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
PTCD2-211ENST00000536805 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
PTCD2-211ENST00000536805 BCL2L13Q9BXK5 485 aa15.33■□□□□ 0.05
PTCD2-211ENST00000536805 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.05
PTCD2-211ENST00000536805 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.05
PTCD2-211ENST00000536805 GOLGA6L3A6NEY3 463 aa15.32■□□□□ 0.04
PTCD2-211ENST00000536805 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
PTCD2-211ENST00000536805 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
PTCD2-211ENST00000536805 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
PTCD2-211ENST00000536805 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
PTCD2-211ENST00000536805 GLI2P10070 1586 aa15.31■□□□□ 0.04
PTCD2-211ENST00000536805 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
PTCD2-211ENST00000536805 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
PTCD2-211ENST00000536805 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
PTCD2-211ENST00000536805 TULP4Q9NRJ4 1543 aa15.31■□□□□ 0.04
PTCD2-211ENST00000536805 NCOA3Q9Y6Q9 1424 aa15.3■□□□□ 0.04
PTCD2-211ENST00000536805 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
PTCD2-211ENST00000536805 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
PTCD2-211ENST00000536805 ABCC11Q96J66 1382 aa15.3■□□□□ 0.04
PTCD2-211ENST00000536805 IL16Q14005 1332 aa15.28■□□□□ 0.04
PTCD2-211ENST00000536805 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
PTCD2-211ENST00000536805 COL3A1P02461 1466 aaPredicted RBP15.28■□□□□ 0.04
PTCD2-211ENST00000536805 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
PTCD2-211ENST00000536805 XRCC6P12956 609 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTCD2-211ENST00000536805 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
PTCD2-211ENST00000536805 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
PTCD2-211ENST00000536805 NPATQ14207 1427 aa15.28■□□□□ 0.04
PTCD2-211ENST00000536805 EVC2Q86UK5 1308 aa15.28■□□□□ 0.04
PTCD2-211ENST00000536805 ANKRD26Q9UPS8 1709 aa15.27■□□□□ 0.04
PTCD2-211ENST00000536805 DDX11L8A8MPP1 907 aa15.27■□□□□ 0.04
PTCD2-211ENST00000536805 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
PTCD2-211ENST00000536805 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTCD2-211ENST00000536805 TRIM27P14373 513 aa15.27■□□□□ 0.03
PTCD2-211ENST00000536805 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.03
PTCD2-211ENST00000536805 HSCBQ8IWL3 235 aa15.27■□□□□ 0.03
PTCD2-211ENST00000536805 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms