RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CCDC144AA2RUR9 1427 aa16.13■□□□□ 0.17
CHRNB1-202ENST00000536404 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
CHRNB1-202ENST00000536404 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 SPATA31E1Q6ZUB1 1445 aa16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
CHRNB1-202ENST00000536404 CCER2I3L3R5 266 aa16.11■□□□□ 0.17
CHRNB1-202ENST00000536404 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
CHRNB1-202ENST00000536404 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
CHRNB1-202ENST00000536404 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
CHRNB1-202ENST00000536404 STK26Q9P289 416 aa16.09■□□□□ 0.17
CHRNB1-202ENST00000536404 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
CHRNB1-202ENST00000536404 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.17
CHRNB1-202ENST00000536404 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.17
CHRNB1-202ENST00000536404 ANKRD30BQ9BXX2 1392 aa16.07■□□□□ 0.16
CHRNB1-202ENST00000536404 NEFLP07196 543 aa16.07■□□□□ 0.16
CHRNB1-202ENST00000536404 TMEM132EQ6IEE7 984 aa16.07■□□□□ 0.16
CHRNB1-202ENST00000536404 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
CHRNB1-202ENST00000536404 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
CHRNB1-202ENST00000536404 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
CHRNB1-202ENST00000536404 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
CHRNB1-202ENST00000536404 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
CHRNB1-202ENST00000536404 ANP32CO43423 234 aa16.02■□□□□ 0.16
CHRNB1-202ENST00000536404 AFF2P51816 1311 aa16.02■□□□□ 0.16
CHRNB1-202ENST00000536404 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
CHRNB1-202ENST00000536404 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.16
CHRNB1-202ENST00000536404 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
CHRNB1-202ENST00000536404 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
CHRNB1-202ENST00000536404 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
CHRNB1-202ENST00000536404 TECPR2O15040 1411 aa16.01■□□□□ 0.15
CHRNB1-202ENST00000536404 ESCO1Q5FWF5 840 aa16.01■□□□□ 0.15
CHRNB1-202ENST00000536404 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
CHRNB1-202ENST00000536404 C8orf37Q96NL8 207 aa16■□□□□ 0.15
CHRNB1-202ENST00000536404 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
CHRNB1-202ENST00000536404 LAMC1P11047 1609 aa15.99■□□□□ 0.15
CHRNB1-202ENST00000536404 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
CHRNB1-202ENST00000536404 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
CHRNB1-202ENST00000536404 RXRBP28702 533 aa15.98■□□□□ 0.15
CHRNB1-202ENST00000536404 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
CHRNB1-202ENST00000536404 CDC42BPGQ6DT37 1551 aa15.98■□□□□ 0.15
CHRNB1-202ENST00000536404 FOXO3O43524 673 aa15.97■□□□□ 0.15
CHRNB1-202ENST00000536404 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
CHRNB1-202ENST00000536404 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
CHRNB1-202ENST00000536404 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
CHRNB1-202ENST00000536404 TONSLQ96HA7 1378 aa15.96■□□□□ 0.14
CHRNB1-202ENST00000536404 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
CHRNB1-202ENST00000536404 NGLY1Q96IV0 654 aa15.95■□□□□ 0.14
CHRNB1-202ENST00000536404 QTRT2Q9H974 415 aaKnown RBP15.95■□□□□ 0.14
CHRNB1-202ENST00000536404 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
CHRNB1-202ENST00000536404 MYOM2P54296 1465 aa15.95■□□□□ 0.14
CHRNB1-202ENST00000536404 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CHRNB1-202ENST00000536404 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
CHRNB1-202ENST00000536404 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
CHRNB1-202ENST00000536404 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
CHRNB1-202ENST00000536404 PXDNQ92626 1479 aa15.92■□□□□ 0.14
CHRNB1-202ENST00000536404 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
CHRNB1-202ENST00000536404 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
CHRNB1-202ENST00000536404 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHRNB1-202ENST00000536404 FMN2Q9NZ56 1722 aa15.91■□□□□ 0.14
CHRNB1-202ENST00000536404 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
CHRNB1-202ENST00000536404 DCAF11Q8TEB1 546 aa15.9■□□□□ 0.14
CHRNB1-202ENST00000536404 COL22A1Q8NFW1 1626 aaPredicted RBP15.89■□□□□ 0.13
CHRNB1-202ENST00000536404 POGKQ9P215 609 aa15.89■□□□□ 0.13
CHRNB1-202ENST00000536404 USP21Q9UK80 565 aa15.89■□□□□ 0.13
CHRNB1-202ENST00000536404 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
CHRNB1-202ENST00000536404 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
CHRNB1-202ENST00000536404 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
CHRNB1-202ENST00000536404 FNBP4Q8N3X1 1017 aaPredicted RBP15.87■□□□□ 0.13
CHRNB1-202ENST00000536404 RGS12O14924 1447 aa15.87■□□□□ 0.13
CHRNB1-202ENST00000536404 RGPD8O14715 1765 aaPredicted RBP15.87■□□□□ 0.13
CHRNB1-202ENST00000536404 PHF8Q9UPP1 1060 aa15.86■□□□□ 0.13
CHRNB1-202ENST00000536404 SPATA31A3Q5VYP0 1347 aa15.86■□□□□ 0.13
CHRNB1-202ENST00000536404 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
CHRNB1-202ENST00000536404 TRPC5Q9UL62 973 aaPredicted RBP15.85■□□□□ 0.13
CHRNB1-202ENST00000536404 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
CHRNB1-202ENST00000536404 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
CHRNB1-202ENST00000536404 KIF1AQ12756 1690 aa15.83■□□□□ 0.13
CHRNB1-202ENST00000536404 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.13
CHRNB1-202ENST00000536404 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
CHRNB1-202ENST00000536404 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.12
CHRNB1-202ENST00000536404 ATRNO75882 1429 aa15.82■□□□□ 0.12
CHRNB1-202ENST00000536404 PSME1Q06323 249 aa15.82■□□□□ 0.12
CHRNB1-202ENST00000536404 STAC3Q96MF2 364 aa15.81■□□□□ 0.12
CHRNB1-202ENST00000536404 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
CHRNB1-202ENST00000536404 CABLES1Q8TDN4 633 aa15.8■□□□□ 0.12
CHRNB1-202ENST00000536404 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
CHRNB1-202ENST00000536404 USP32Q8NFA0 1604 aa15.8■□□□□ 0.12
CHRNB1-202ENST00000536404 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
CHRNB1-202ENST00000536404 ANKARQ7Z5J8 1434 aa15.79■□□□□ 0.12
CHRNB1-202ENST00000536404 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
CHRNB1-202ENST00000536404 UBE2Q2Q8WVN8 375 aa15.79■□□□□ 0.12
CHRNB1-202ENST00000536404 TNS3Q68CZ2 1445 aa15.78■□□□□ 0.12
CHRNB1-202ENST00000536404 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
CHRNB1-202ENST00000536404 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
CHRNB1-202ENST00000536404 SBNO1A3KN83 1393 aa15.77■□□□□ 0.12
CHRNB1-202ENST00000536404 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
CHRNB1-202ENST00000536404 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
CHRNB1-202ENST00000536404 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms