RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 KNDC1Q76NI1 1749 aa12.57□□□□□ -0.4
CD4-204ENST00000535707 TECPR2O15040 1411 aa12.57□□□□□ -0.4
CD4-204ENST00000535707 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
CD4-204ENST00000535707 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
CD4-204ENST00000535707 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
CD4-204ENST00000535707 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
CD4-204ENST00000535707 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
CD4-204ENST00000535707 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
CD4-204ENST00000535707 XRN1Q8IZH2 1706 aaKnown RBP12.56□□□□□ -0.4
CD4-204ENST00000535707 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
CD4-204ENST00000535707 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
CD4-204ENST00000535707 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
CD4-204ENST00000535707 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
CD4-204ENST00000535707 ROCK2O75116 1388 aaKnown RBP12.55□□□□□ -0.4
CD4-204ENST00000535707 METP08581 1390 aa12.55□□□□□ -0.4
CD4-204ENST00000535707 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
CD4-204ENST00000535707 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
CD4-204ENST00000535707 CPS1P31327 1500 aa12.54□□□□□ -0.4
CD4-204ENST00000535707 SLC26A8Q96RN1 970 aa12.54□□□□□ -0.4
CD4-204ENST00000535707 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
CD4-204ENST00000535707 KCNA6P17658 529 aa12.53□□□□□ -0.4
CD4-204ENST00000535707 NCOA3Q9Y6Q9 1424 aa12.53□□□□□ -0.4
CD4-204ENST00000535707 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
CD4-204ENST00000535707 NBR1Q14596 966 aa12.51□□□□□ -0.41
CD4-204ENST00000535707 PTPRUQ92729 1446 aa12.51□□□□□ -0.41
CD4-204ENST00000535707 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
CD4-204ENST00000535707 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
CD4-204ENST00000535707 ARHGEF28Q8N1W1 1705 aaKnown RBP12.5□□□□□ -0.41
CD4-204ENST00000535707 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
CD4-204ENST00000535707 AMOTL2Q9Y2J4 779 aa12.49□□□□□ -0.41
CD4-204ENST00000535707 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
CD4-204ENST00000535707 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
CD4-204ENST00000535707 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
CD4-204ENST00000535707 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
CD4-204ENST00000535707 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
CD4-204ENST00000535707 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.41
CD4-204ENST00000535707 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
CD4-204ENST00000535707 USP47Q96K76 1375 aa12.45□□□□□ -0.42
CD4-204ENST00000535707 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
CD4-204ENST00000535707 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
CD4-204ENST00000535707 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
CD4-204ENST00000535707 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
CD4-204ENST00000535707 DCCP43146 1447 aa12.44□□□□□ -0.42
CD4-204ENST00000535707 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
CD4-204ENST00000535707 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
CD4-204ENST00000535707 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CD4-204ENST00000535707 QRICH2Q9H0J4 1663 aa12.42□□□□□ -0.42
CD4-204ENST00000535707 TULP1O00294 542 aaPredicted RBP12.42□□□□□ -0.42
CD4-204ENST00000535707 STK26Q9P289 416 aa12.42□□□□□ -0.42
CD4-204ENST00000535707 ADGRL3Q9HAR2 1447 aa12.42□□□□□ -0.42
CD4-204ENST00000535707 CDC42BPGQ6DT37 1551 aa12.42□□□□□ -0.42
CD4-204ENST00000535707 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
CD4-204ENST00000535707 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
CD4-204ENST00000535707 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
CD4-204ENST00000535707 POGKQ9P215 609 aa12.41□□□□□ -0.42
CD4-204ENST00000535707 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CD4-204ENST00000535707 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
CD4-204ENST00000535707 NALCNQ8IZF0 1738 aa12.4□□□□□ -0.43
CD4-204ENST00000535707 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.4□□□□□ -0.43
CD4-204ENST00000535707 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
CD4-204ENST00000535707 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
CD4-204ENST00000535707 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
CD4-204ENST00000535707 MIER1Q8N108 512 aa12.38□□□□□ -0.43
CD4-204ENST00000535707 TESK2Q96S53 571 aa12.38□□□□□ -0.43
CD4-204ENST00000535707 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
CD4-204ENST00000535707 PLEKHH1Q9ULM0 1364 aa12.38□□□□□ -0.43
CD4-204ENST00000535707 CDCA8Q53HL2 280 aa12.37□□□□□ -0.43
CD4-204ENST00000535707 WAPLQ7Z5K2 1190 aa12.37□□□□□ -0.43
CD4-204ENST00000535707 MSH6P52701 1360 aa12.37□□□□□ -0.43
CD4-204ENST00000535707 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
CD4-204ENST00000535707 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
CD4-204ENST00000535707 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
CD4-204ENST00000535707 FMN2Q9NZ56 1722 aa12.36□□□□□ -0.43
CD4-204ENST00000535707 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
CD4-204ENST00000535707 TMF1P82094 1093 aa12.35□□□□□ -0.43
CD4-204ENST00000535707 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
CD4-204ENST00000535707 TULP4Q9NRJ4 1543 aa12.35□□□□□ -0.43
CD4-204ENST00000535707 WASLO00401 505 aaPredicted RBP12.34□□□□□ -0.43
CD4-204ENST00000535707 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
CD4-204ENST00000535707 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
CD4-204ENST00000535707 ATAD2Q6PL18 1390 aa12.32□□□□□ -0.44
CD4-204ENST00000535707 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
CD4-204ENST00000535707 ATF3P18847 181 aa12.32□□□□□ -0.44
CD4-204ENST00000535707 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
CD4-204ENST00000535707 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
CD4-204ENST00000535707 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
CD4-204ENST00000535707 TOPAZ1Q8N9V7 1692 aa12.31□□□□□ -0.44
CD4-204ENST00000535707 MST1RQ04912 1400 aa12.3□□□□□ -0.44
CD4-204ENST00000535707 ATP7BP35670 1465 aa12.3□□□□□ -0.44
CD4-204ENST00000535707 SAFB2Q14151 953 aaKnown RBP eCLIP12.3□□□□□ -0.44
CD4-204ENST00000535707 CDK19Q9BWU1 502 aa12.3□□□□□ -0.44
CD4-204ENST00000535707 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
CD4-204ENST00000535707 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
CD4-204ENST00000535707 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
CD4-204ENST00000535707 C1orf167Q5SNV9 1468 aa12.28□□□□□ -0.44
CD4-204ENST00000535707 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
CD4-204ENST00000535707 TOM1O60784 492 aa12.27□□□□□ -0.45
CD4-204ENST00000535707 ABCB7O75027 752 aa12.27□□□□□ -0.45
CD4-204ENST00000535707 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
CD4-204ENST00000535707 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms