RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
SPG11-203ENST00000535302 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.04
SPG11-203ENST00000535302 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
SPG11-203ENST00000535302 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
SPG11-203ENST00000535302 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
SPG11-203ENST00000535302 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
SPG11-203ENST00000535302 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
SPG11-203ENST00000535302 C1orf115Q9H7X2 142 aa15.32■□□□□ 0.04
SPG11-203ENST00000535302 ATF3P18847 181 aa15.31■□□□□ 0.04
SPG11-203ENST00000535302 DDX58O95786 925 aaKnown RBP15.31■□□□□ 0.04
SPG11-203ENST00000535302 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
SPG11-203ENST00000535302 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
SPG11-203ENST00000535302 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
SPG11-203ENST00000535302 IPO7O95373 1038 aaKnown RBP15.3■□□□□ 0.04
SPG11-203ENST00000535302 ATP2B1P20020 1258 aa15.3■□□□□ 0.04
SPG11-203ENST00000535302 EPS15P42566 896 aa15.3■□□□□ 0.04
SPG11-203ENST00000535302 RUFY1Q96T51 708 aa15.3■□□□□ 0.04
SPG11-203ENST00000535302 GPS2Q13227 327 aa15.3■□□□□ 0.04
SPG11-203ENST00000535302 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
SPG11-203ENST00000535302 TRDNQ13061 729 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 GSE1Q14687 1217 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 NLRP6P59044 892 aa15.29■□□□□ 0.04
SPG11-203ENST00000535302 REC8O95072 547 aa15.28■□□□□ 0.04
SPG11-203ENST00000535302 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
SPG11-203ENST00000535302 STRN4Q9NRL3 753 aa15.28■□□□□ 0.04
SPG11-203ENST00000535302 ATP6V1DQ9Y5K8 247 aa15.28■□□□□ 0.04
SPG11-203ENST00000535302 ERICH2A1L162 156 aa15.28■□□□□ 0.04
SPG11-203ENST00000535302 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
SPG11-203ENST00000535302 MPNDQ8N594 471 aa15.28■□□□□ 0.04
SPG11-203ENST00000535302 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
SPG11-203ENST00000535302 ESCO1Q5FWF5 840 aa15.27■□□□□ 0.04
SPG11-203ENST00000535302 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
SPG11-203ENST00000535302 SMC3Q9UQE7 1217 aa15.27■□□□□ 0.04
SPG11-203ENST00000535302 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
SPG11-203ENST00000535302 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
SPG11-203ENST00000535302 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
SPG11-203ENST00000535302 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
SPG11-203ENST00000535302 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
SPG11-203ENST00000535302 SASS6Q6UVJ0 657 aa15.26■□□□□ 0.03
SPG11-203ENST00000535302 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
SPG11-203ENST00000535302 CCDC47Q96A33 483 aaKnown RBP15.26■□□□□ 0.03
SPG11-203ENST00000535302 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
SPG11-203ENST00000535302 ANKRD20A12PQ8NF67 263 aa15.25■□□□□ 0.03
SPG11-203ENST00000535302 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
SPG11-203ENST00000535302 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
SPG11-203ENST00000535302 MAP4K4O95819 1239 aaPredicted RBP15.25■□□□□ 0.03
SPG11-203ENST00000535302 MTHFSP49914 203 aa15.25■□□□□ 0.03
SPG11-203ENST00000535302 UBTFL1P0CB47 393 aaPredicted RBP15.24■□□□□ 0.03
SPG11-203ENST00000535302 GNAI1P63096 354 aa15.24■□□□□ 0.03
SPG11-203ENST00000535302 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
SPG11-203ENST00000535302 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
SPG11-203ENST00000535302 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
SPG11-203ENST00000535302 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
SPG11-203ENST00000535302 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
SPG11-203ENST00000535302 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.038e-7■■■■□ 22.4
SPG11-203ENST00000535302 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
SPG11-203ENST00000535302 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
SPG11-203ENST00000535302 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
SPG11-203ENST00000535302 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
SPG11-203ENST00000535302 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
SPG11-203ENST00000535302 TEX35Q5T0J7 233 aa15.22■□□□□ 0.03
SPG11-203ENST00000535302 TXNDC2Q86VQ3 553 aa15.22■□□□□ 0.03
SPG11-203ENST00000535302 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
SPG11-203ENST00000535302 ANKRD62A6NC57 917 aa15.22■□□□□ 0.03
SPG11-203ENST00000535302 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
SPG11-203ENST00000535302 FSD1Q9BTV5 496 aa15.22■□□□□ 0.03
SPG11-203ENST00000535302 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
SPG11-203ENST00000535302 CCDC7Q96M83 1385 aa15.21■□□□□ 0.03
SPG11-203ENST00000535302 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
SPG11-203ENST00000535302 OFD1O75665 1012 aa15.21■□□□□ 0.03
SPG11-203ENST00000535302 MNS1Q8NEH6 495 aa15.21■□□□□ 0.03
SPG11-203ENST00000535302 AK7Q96M32 723 aa15.21■□□□□ 0.03
SPG11-203ENST00000535302 RALYLQ86SE5 291 aaKnown RBP15.21■□□□□ 0.02
SPG11-203ENST00000535302 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
SPG11-203ENST00000535302 ERC2O15083 957 aa15.2■□□□□ 0.02
SPG11-203ENST00000535302 SIL1Q9H173 461 aa15.2■□□□□ 0.02
SPG11-203ENST00000535302 ROCK1Q13464 1354 aa15.2■□□□□ 0.02
SPG11-203ENST00000535302 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
SPG11-203ENST00000535302 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
SPG11-203ENST00000535302 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
SPG11-203ENST00000535302 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
SPG11-203ENST00000535302 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
SPG11-203ENST00000535302 NEFHP12036 1026 aa15.19■□□□□ 0.02
SPG11-203ENST00000535302 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
SPG11-203ENST00000535302 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
SPG11-203ENST00000535302 CCAR1Q8IX12 1150 aaKnown RBP15.18■□□□□ 0.02
SPG11-203ENST00000535302 XPCQ01831 940 aaPredicted RBP15.18■□□□□ 0.02
SPG11-203ENST00000535302 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
SPG11-203ENST00000535302 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
SPG11-203ENST00000535302 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
SPG11-203ENST00000535302 HOOK1Q9UJC3 728 aaKnown RBP15.18■□□□□ 0.02
SPG11-203ENST00000535302 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
SPG11-203ENST00000535302 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
SPG11-203ENST00000535302 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
SPG11-203ENST00000535302 SMC2O95347 1197 aa15.17■□□□□ 0.02
SPG11-203ENST00000535302 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
SPG11-203ENST00000535302 MYL6BP14649 208 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms