RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 EVX2Q03828 476 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 BRINP3Q76B58 766 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 AMOTL2Q9Y2J4 779 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
GEN1-207ENST00000534669 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
GEN1-207ENST00000534669 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
GEN1-207ENST00000534669 MST1RQ04912 1400 aa11.03□□□□□ -0.64
GEN1-207ENST00000534669 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.03□□□□□ -0.64
GEN1-207ENST00000534669 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
GEN1-207ENST00000534669 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
GEN1-207ENST00000534669 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
GEN1-207ENST00000534669 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.65
GEN1-207ENST00000534669 MEX3CQ5U5Q3 659 aaKnown RBP11.02□□□□□ -0.65
GEN1-207ENST00000534669 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
GEN1-207ENST00000534669 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
GEN1-207ENST00000534669 NUP155O75694 1391 aa11.02□□□□□ -0.65
GEN1-207ENST00000534669 METP08581 1390 aa11.02□□□□□ -0.65
GEN1-207ENST00000534669 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
GEN1-207ENST00000534669 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
GEN1-207ENST00000534669 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
GEN1-207ENST00000534669 ATF3P18847 181 aa11.01□□□□□ -0.65
GEN1-207ENST00000534669 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
GEN1-207ENST00000534669 NEXMIFQ5QGS0 1516 aa11□□□□□ -0.65
GEN1-207ENST00000534669 DCCP43146 1447 aa11□□□□□ -0.65
GEN1-207ENST00000534669 ITGAEP38570 1179 aa10.99□□□□□ -0.65
GEN1-207ENST00000534669 ZNF772Q68DY9 489 aaPredicted RBP10.99□□□□□ -0.65
GEN1-207ENST00000534669 SETD5Q9C0A6 1442 aa10.99□□□□□ -0.65
GEN1-207ENST00000534669 AFF2P51816 1311 aa10.98□□□□□ -0.65
GEN1-207ENST00000534669 RGS12O14924 1447 aa10.98□□□□□ -0.65
GEN1-207ENST00000534669 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
GEN1-207ENST00000534669 RXRBP28702 533 aa10.97□□□□□ -0.65
GEN1-207ENST00000534669 PPARGC1BQ86YN6 1023 aaKnown RBP10.97□□□□□ -0.65
GEN1-207ENST00000534669 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
GEN1-207ENST00000534669 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
GEN1-207ENST00000534669 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
GEN1-207ENST00000534669 KIF1BO60333 1816 aa10.95□□□□□ -0.66
GEN1-207ENST00000534669 LAMC1P11047 1609 aa10.95□□□□□ -0.66
GEN1-207ENST00000534669 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
GEN1-207ENST00000534669 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
GEN1-207ENST00000534669 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
GEN1-207ENST00000534669 C8orf37Q96NL8 207 aa10.93□□□□□ -0.66
GEN1-207ENST00000534669 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
GEN1-207ENST00000534669 PPLO60437 1756 aa10.91□□□□□ -0.66
GEN1-207ENST00000534669 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
GEN1-207ENST00000534669 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
GEN1-207ENST00000534669 ORAI2Q96SN7 254 aa10.91□□□□□ -0.66
GEN1-207ENST00000534669 ADAMTS2O95450 1211 aa10.9□□□□□ -0.66
GEN1-207ENST00000534669 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
GEN1-207ENST00000534669 COL22A1Q8NFW1 1626 aaPredicted RBP10.9□□□□□ -0.66
GEN1-207ENST00000534669 PTCH1Q13635 1447 aa10.9□□□□□ -0.66
GEN1-207ENST00000534669 CLCN6P51797 869 aa10.89□□□□□ -0.67
GEN1-207ENST00000534669 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
GEN1-207ENST00000534669 NAIPQ13075 1403 aa10.89□□□□□ -0.67
GEN1-207ENST00000534669 SOS2Q07890 1332 aaPredicted RBP10.88□□□□□ -0.67
GEN1-207ENST00000534669 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
GEN1-207ENST00000534669 MIER1Q8N108 512 aa10.88□□□□□ -0.67
GEN1-207ENST00000534669 MARF1Q9Y4F3 1742 aaKnown RBP10.88□□□□□ -0.67
GEN1-207ENST00000534669 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
GEN1-207ENST00000534669 GABBR2O75899 941 aa10.86□□□□□ -0.67
GEN1-207ENST00000534669 NGLY1Q96IV0 654 aa10.86□□□□□ -0.67
GEN1-207ENST00000534669 MYOM2P54296 1465 aa10.86□□□□□ -0.67
GEN1-207ENST00000534669 PXDNQ92626 1479 aa10.86□□□□□ -0.67
GEN1-207ENST00000534669 ATRNO75882 1429 aa10.85□□□□□ -0.67
GEN1-207ENST00000534669 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
GEN1-207ENST00000534669 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
GEN1-207ENST00000534669 CDC42BPGQ6DT37 1551 aa10.85□□□□□ -0.67
GEN1-207ENST00000534669 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
GEN1-207ENST00000534669 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
GEN1-207ENST00000534669 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
GEN1-207ENST00000534669 USP21Q9UK80 565 aa10.84□□□□□ -0.67
GEN1-207ENST00000534669 BCL9LQ86UU0 1499 aa10.83□□□□□ -0.68
GEN1-207ENST00000534669 XPCQ01831 940 aaPredicted RBP10.83□□□□□ -0.68
GEN1-207ENST00000534669 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
GEN1-207ENST00000534669 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
GEN1-207ENST00000534669 EP400Q96L91 3159 aa10.83□□□□□ -0.68
GEN1-207ENST00000534669 SRCAPQ6ZRS2 3230 aa10.82□□□□□ -0.68
GEN1-207ENST00000534669 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
GEN1-207ENST00000534669 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
GEN1-207ENST00000534669 HFM1A2PYH4 1435 aa10.82□□□□□ -0.68
GEN1-207ENST00000534669 ADGRF5Q8IZF2 1346 aa10.82□□□□□ -0.68
GEN1-207ENST00000534669 GLI3P10071 1580 aa10.82□□□□□ -0.68
GEN1-207ENST00000534669 BRWD3Q6RI45 1802 aa10.81□□□□□ -0.68
GEN1-207ENST00000534669 KNDC1Q76NI1 1749 aa10.81□□□□□ -0.68
GEN1-207ENST00000534669 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
GEN1-207ENST00000534669 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
GEN1-207ENST00000534669 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
GEN1-207ENST00000534669 TRPC5Q9UL62 973 aaPredicted RBP10.81□□□□□ -0.68
GEN1-207ENST00000534669 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
GEN1-207ENST00000534669 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
GEN1-207ENST00000534669 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
GEN1-207ENST00000534669 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
GEN1-207ENST00000534669 FOXO3O43524 673 aa10.79□□□□□ -0.68
GEN1-207ENST00000534669 ESCO1Q5FWF5 840 aa10.79□□□□□ -0.68
GEN1-207ENST00000534669 RPGRIP1LQ68CZ1 1315 aa10.79□□□□□ -0.68
GEN1-207ENST00000534669 TECPR2O15040 1411 aa10.78□□□□□ -0.68
GEN1-207ENST00000534669 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
GEN1-207ENST00000534669 STK26Q9P289 416 aa10.78□□□□□ -0.68
GEN1-207ENST00000534669 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms