RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
SHARPIN-210ENST00000534435 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
SHARPIN-210ENST00000534435 LAMC1P11047 1609 aa12.95□□□□□ -0.34
SHARPIN-210ENST00000534435 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
SHARPIN-210ENST00000534435 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
SHARPIN-210ENST00000534435 UNC5CLQ8IV45 518 aa12.95□□□□□ -0.34
SHARPIN-210ENST00000534435 PXDNQ92626 1479 aa12.95□□□□□ -0.34
SHARPIN-210ENST00000534435 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
SHARPIN-210ENST00000534435 FOXO3O43524 673 aa12.94□□□□□ -0.34
SHARPIN-210ENST00000534435 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
SHARPIN-210ENST00000534435 FAM182BQ5T319 152 aa12.93□□□□□ -0.34
SHARPIN-210ENST00000534435 SLIT2O94813 1529 aa12.93□□□□□ -0.34
SHARPIN-210ENST00000534435 YY1P25490 414 aa12.92□□□□□ -0.34
SHARPIN-210ENST00000534435 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
SHARPIN-210ENST00000534435 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
SHARPIN-210ENST00000534435 NUP155O75694 1391 aa12.91□□□□□ -0.34
SHARPIN-210ENST00000534435 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
SHARPIN-210ENST00000534435 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
SHARPIN-210ENST00000534435 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
SHARPIN-210ENST00000534435 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
SHARPIN-210ENST00000534435 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
SHARPIN-210ENST00000534435 A0A0G2JS52 829 aa12.88□□□□□ -0.35
SHARPIN-210ENST00000534435 BAG6P46379 1132 aa12.88□□□□□ -0.35
SHARPIN-210ENST00000534435 MYT1Q01538 1121 aa12.88□□□□□ -0.35
SHARPIN-210ENST00000534435 VPS72Q15906 364 aa12.87□□□□□ -0.35
SHARPIN-210ENST00000534435 IQGAP3Q86VI3 1631 aa12.86□□□□□ -0.35
SHARPIN-210ENST00000534435 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
SHARPIN-210ENST00000534435 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
SHARPIN-210ENST00000534435 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
SHARPIN-210ENST00000534435 SPATA31A3Q5VYP0 1347 aa12.85□□□□□ -0.35
SHARPIN-210ENST00000534435 APLP2Q06481 763 aa12.84□□□□□ -0.35
SHARPIN-210ENST00000534435 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
SHARPIN-210ENST00000534435 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
SHARPIN-210ENST00000534435 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
SHARPIN-210ENST00000534435 NAIPQ13075 1403 aa12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 CLTCL1P53675 1640 aa12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 ITGAEP38570 1179 aa12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
SHARPIN-210ENST00000534435 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
SHARPIN-210ENST00000534435 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
SHARPIN-210ENST00000534435 STK26Q9P289 416 aa12.81□□□□□ -0.36
SHARPIN-210ENST00000534435 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
SHARPIN-210ENST00000534435 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
SHARPIN-210ENST00000534435 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
SHARPIN-210ENST00000534435 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
SHARPIN-210ENST00000534435 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
SHARPIN-210ENST00000534435 CAMKK2Q96RR4 588 aa12.78□□□□□ -0.36
SHARPIN-210ENST00000534435 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
SHARPIN-210ENST00000534435 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.37
SHARPIN-210ENST00000534435 TRIM37O94972 964 aa12.76□□□□□ -0.37
SHARPIN-210ENST00000534435 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
SHARPIN-210ENST00000534435 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
SHARPIN-210ENST00000534435 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
SHARPIN-210ENST00000534435 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
SHARPIN-210ENST00000534435 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
SHARPIN-210ENST00000534435 DISP2A7MBM2 1401 aa12.74□□□□□ -0.37
SHARPIN-210ENST00000534435 TMEM132EQ6IEE7 984 aa12.74□□□□□ -0.37
SHARPIN-210ENST00000534435 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
SHARPIN-210ENST00000534435 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
SHARPIN-210ENST00000534435 APBA3O96018 575 aa12.72□□□□□ -0.37
SHARPIN-210ENST00000534435 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
SHARPIN-210ENST00000534435 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
SHARPIN-210ENST00000534435 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
SHARPIN-210ENST00000534435 IFFO2Q5TF58 517 aa12.71□□□□□ -0.37
SHARPIN-210ENST00000534435 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
SHARPIN-210ENST00000534435 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
SHARPIN-210ENST00000534435 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
SHARPIN-210ENST00000534435 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
SHARPIN-210ENST00000534435 RGPD1P0DJD0 1748 aa12.7□□□□□ -0.38
SHARPIN-210ENST00000534435 CAMTA1Q9Y6Y1 1673 aa12.7□□□□□ -0.38
SHARPIN-210ENST00000534435 NRAPQ86VF7 1730 aa12.69□□□□□ -0.38
SHARPIN-210ENST00000534435 ABCA3Q99758 1704 aa12.69□□□□□ -0.38
SHARPIN-210ENST00000534435 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
SHARPIN-210ENST00000534435 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 PSME1Q06323 249 aa12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 SAFB2Q14151 953 aaKnown RBP eCLIP12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 PCGF6Q9BYE7 350 aa12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 SBNO1A3KN83 1393 aa12.68□□□□□ -0.38
SHARPIN-210ENST00000534435 SPON1Q9HCB6 807 aa12.67□□□□□ -0.38
SHARPIN-210ENST00000534435 TECPR2O15040 1411 aa12.67□□□□□ -0.38
SHARPIN-210ENST00000534435 FMN2Q9NZ56 1722 aa12.67□□□□□ -0.38
SHARPIN-210ENST00000534435 THSD7AQ9UPZ6 1657 aa12.67□□□□□ -0.38
SHARPIN-210ENST00000534435 KCNQ2O43526 872 aa12.66□□□□□ -0.38
SHARPIN-210ENST00000534435 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
SHARPIN-210ENST00000534435 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
SHARPIN-210ENST00000534435 KIF1AQ12756 1690 aa12.66□□□□□ -0.38
SHARPIN-210ENST00000534435 ARHGEF10O15013 1369 aa12.66□□□□□ -0.38
SHARPIN-210ENST00000534435 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
SHARPIN-210ENST00000534435 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
SHARPIN-210ENST00000534435 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
SHARPIN-210ENST00000534435 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
SHARPIN-210ENST00000534435 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
SHARPIN-210ENST00000534435 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
SHARPIN-210ENST00000534435 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
SHARPIN-210ENST00000534435 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
SHARPIN-210ENST00000534435 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
SHARPIN-210ENST00000534435 SPATA31A1Q5TZJ5 1347 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms