RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 BRICD5Q6PL45 260 aa7.86□□□□□ -1.15
HIPK3-206ENST00000534262 POLR3EQ9NVU0 708 aa7.85□□□□□ -1.15
HIPK3-206ENST00000534262 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
HIPK3-206ENST00000534262 PCDHB15Q9Y5E8 787 aa7.85□□□□□ -1.15
HIPK3-206ENST00000534262 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
HIPK3-206ENST00000534262 RNF19BQ6ZMZ0 732 aa7.83□□□□□ -1.16
HIPK3-206ENST00000534262 PROCA1Q8NCQ7 364 aaPredicted RBP7.83□□□□□ -1.16
HIPK3-206ENST00000534262 NKX2-3Q8TAU0 364 aa7.83□□□□□ -1.16
HIPK3-206ENST00000534262 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.83□□□□□ -1.16
HIPK3-206ENST00000534262 FMNL1O95466 1100 aaPredicted RBP7.82□□□□□ -1.16
HIPK3-206ENST00000534262 Q3C1V9 767 aa7.82□□□□□ -1.16
HIPK3-206ENST00000534262 SYMPKQ92797 1274 aaKnown RBP7.82□□□□□ -1.16
HIPK3-206ENST00000534262 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
HIPK3-206ENST00000534262 LILRB3O75022 631 aa7.81□□□□□ -1.16
HIPK3-206ENST00000534262 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
HIPK3-206ENST00000534262 FAM160A2Q8N612 972 aaPredicted RBP7.81□□□□□ -1.16
HIPK3-206ENST00000534262 SPSB2Q99619 263 aa7.81□□□□□ -1.16
HIPK3-206ENST00000534262 TLL1O43897 1013 aa7.8□□□□□ -1.16
HIPK3-206ENST00000534262 ADH1BP00325 375 aa7.8□□□□□ -1.16
HIPK3-206ENST00000534262 HRCP23327 699 aa7.8□□□□□ -1.16
HIPK3-206ENST00000534262 QPCTQ16769 361 aa7.8□□□□□ -1.16
HIPK3-206ENST00000534262 MTMR2Q13614 643 aa7.79□□□□□ -1.16
HIPK3-206ENST00000534262 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
HIPK3-206ENST00000534262 RETREG3Q86VR2 466 aa7.79□□□□□ -1.16
HIPK3-206ENST00000534262 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
HIPK3-206ENST00000534262 SPDYE5A6NIY4 337 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 C6orf229H3BNL8 230 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
HIPK3-206ENST00000534262 ZBTB3Q9H5J0 574 aa7.78□□□□□ -1.16
HIPK3-206ENST00000534262 MSS51Q4VC12 460 aa7.77□□□□□ -1.17
HIPK3-206ENST00000534262 RTL5Q5HYW3 569 aaPredicted RBP7.77□□□□□ -1.17
HIPK3-206ENST00000534262 SLC6A16Q9GZN6 736 aa7.76□□□□□ -1.17
HIPK3-206ENST00000534262 MMP16P51512 607 aa7.75□□□□□ -1.17
HIPK3-206ENST00000534262 PPP1R18Q6NYC8 613 aa7.75□□□□□ -1.17
HIPK3-206ENST00000534262 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
HIPK3-206ENST00000534262 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
HIPK3-206ENST00000534262 CFAP99D6REC4 459 aa7.74□□□□□ -1.17
HIPK3-206ENST00000534262 S1PR4O95977 384 aa7.74□□□□□ -1.17
HIPK3-206ENST00000534262 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
HIPK3-206ENST00000534262 DESI1Q6ICB0 168 aa7.74□□□□□ -1.17
HIPK3-206ENST00000534262 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
HIPK3-206ENST00000534262 PRR7Q8TB68 274 aa7.74□□□□□ -1.17
HIPK3-206ENST00000534262 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
HIPK3-206ENST00000534262 A0A0G2JS52 829 aa7.73□□□□□ -1.17
HIPK3-206ENST00000534262 DXOO77932 396 aaKnown RBP7.73□□□□□ -1.17
HIPK3-206ENST00000534262 PRDM9Q9NQV7 894 aa7.73□□□□□ -1.17
HIPK3-206ENST00000534262 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
HIPK3-206ENST00000534262 JUNDP17535 347 aa7.72□□□□□ -1.17
HIPK3-206ENST00000534262 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
HIPK3-206ENST00000534262 RFC5P40937 340 aa7.71□□□□□ -1.18
HIPK3-206ENST00000534262 HOMEZQ8IX15 550 aa7.71□□□□□ -1.18
HIPK3-206ENST00000534262 ATP1B4Q9UN42 357 aaPredicted RBP7.71□□□□□ -1.18
HIPK3-206ENST00000534262 GGCXP38435 758 aa7.7□□□□□ -1.18
HIPK3-206ENST00000534262 LYPD8Q6UX82 237 aa7.69□□□□□ -1.18
HIPK3-206ENST00000534262 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
HIPK3-206ENST00000534262 CTDSPL2Q05D32 466 aa7.68□□□□□ -1.18
HIPK3-206ENST00000534262 PER1O15534 1290 aaPredicted RBP7.67□□□□□ -1.18
HIPK3-206ENST00000534262 PTPRNQ16849 979 aa7.67□□□□□ -1.18
HIPK3-206ENST00000534262 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
HIPK3-206ENST00000534262 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
HIPK3-206ENST00000534262 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
HIPK3-206ENST00000534262 EVA1BQ9NVM1 165 aa7.66□□□□□ -1.18
HIPK3-206ENST00000534262 FCF1Q9Y324 198 aaKnown RBP7.66□□□□□ -1.18
HIPK3-206ENST00000534262 HELBQ8NG08 1087 aaPredicted RBP7.65□□□□□ -1.18
HIPK3-206ENST00000534262 EMID1Q96A84 441 aaPredicted RBP7.65□□□□□ -1.18
HIPK3-206ENST00000534262 NUDT12Q9BQG2 462 aa7.65□□□□□ -1.18
HIPK3-206ENST00000534262 AP1G2O75843 785 aa7.64□□□□□ -1.19
HIPK3-206ENST00000534262 BANK1Q8NDB2 785 aa7.64□□□□□ -1.19
HIPK3-206ENST00000534262 TSC1Q92574 1164 aa7.64□□□□□ -1.19
HIPK3-206ENST00000534262 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
HIPK3-206ENST00000534262 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
HIPK3-206ENST00000534262 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
HIPK3-206ENST00000534262 PTCRAQ6ISU1 281 aaPredicted RBP7.63□□□□□ -1.19
HIPK3-206ENST00000534262 LRRN4Q8WUT4 740 aa7.63□□□□□ -1.19
HIPK3-206ENST00000534262 RGS20O76081 388 aa7.62□□□□□ -1.19
HIPK3-206ENST00000534262 LIAT1Q6ZQX7 453 aa7.62□□□□□ -1.19
HIPK3-206ENST00000534262 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
HIPK3-206ENST00000534262 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
HIPK3-206ENST00000534262 RPIAP49247 311 aa7.61□□□□□ -1.19
HIPK3-206ENST00000534262 SLC19A1P41440 591 aa7.6□□□□□ -1.19
HIPK3-206ENST00000534262 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
HIPK3-206ENST00000534262 V9GY48 417 aaPredicted RBP7.6□□□□□ -1.19
HIPK3-206ENST00000534262 PRKD2Q9BZL6 878 aa7.59□□□□□ -1.19
HIPK3-206ENST00000534262 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
HIPK3-206ENST00000534262 MAP10Q9P2G4 905 aa7.59□□□□□ -1.19
HIPK3-206ENST00000534262 SOCS7O14512 581 aa7.58□□□□□ -1.2
HIPK3-206ENST00000534262 CTHP32929 405 aa7.58□□□□□ -1.2
HIPK3-206ENST00000534262 SPRYD7Q5W111 196 aa7.58□□□□□ -1.2
HIPK3-206ENST00000534262 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
HIPK3-206ENST00000534262 ZBTB24O43167 697 aaPredicted RBP7.57□□□□□ -1.2
HIPK3-206ENST00000534262 CD2BP2O95400 341 aaKnown RBP7.57□□□□□ -1.2
HIPK3-206ENST00000534262 NR6A1Q15406 480 aa7.57□□□□□ -1.2
HIPK3-206ENST00000534262 MTMR14Q8NCE2 650 aa7.57□□□□□ -1.2
HIPK3-206ENST00000534262 EPS8L1Q8TE68 723 aa7.57□□□□□ -1.2
HIPK3-206ENST00000534262 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
HIPK3-206ENST00000534262 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
HIPK3-206ENST00000534262 TRIM32Q13049 653 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms