RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 MST1RQ04912 1400 aa14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 YTHDC2Q9H6S0 1430 aaKnown RBP14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 USP47Q96K76 1375 aa14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
LDLRAD3-206ENST00000534091 CDC42BPGQ6DT37 1551 aa14.14□□□□□ -0.15
LDLRAD3-206ENST00000534091 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
LDLRAD3-206ENST00000534091 DLC1Q96QB1 1528 aa14.14□□□□□ -0.15
LDLRAD3-206ENST00000534091 DISP3Q9P2K9 1392 aa14.13□□□□□ -0.15
LDLRAD3-206ENST00000534091 CARD11Q9BXL7 1154 aa14.12□□□□□ -0.15
LDLRAD3-206ENST00000534091 MED1Q15648 1581 aaPredicted RBP14.12□□□□□ -0.15
LDLRAD3-206ENST00000534091 JCADQ9P266 1359 aa14.11□□□□□ -0.15
LDLRAD3-206ENST00000534091 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
LDLRAD3-206ENST00000534091 BRINP3Q76B58 766 aa14.11□□□□□ -0.15
LDLRAD3-206ENST00000534091 COL16A1Q07092 1604 aaPredicted RBP14.11□□□□□ -0.15
LDLRAD3-206ENST00000534091 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
LDLRAD3-206ENST00000534091 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
LDLRAD3-206ENST00000534091 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
LDLRAD3-206ENST00000534091 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
LDLRAD3-206ENST00000534091 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
LDLRAD3-206ENST00000534091 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
LDLRAD3-206ENST00000534091 NBPF1Q3BBV0 1214 aa14.07□□□□□ -0.16
LDLRAD3-206ENST00000534091 STK26Q9P289 416 aa14.07□□□□□ -0.16
LDLRAD3-206ENST00000534091 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
LDLRAD3-206ENST00000534091 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
LDLRAD3-206ENST00000534091 CCDC7Q96M83 1385 aa14.06□□□□□ -0.16
LDLRAD3-206ENST00000534091 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
LDLRAD3-206ENST00000534091 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
LDLRAD3-206ENST00000534091 EIF3AQ14152 1382 aaKnown RBP14.05□□□□□ -0.16
LDLRAD3-206ENST00000534091 FMN2Q9NZ56 1722 aa14.04□□□□□ -0.16
LDLRAD3-206ENST00000534091 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
LDLRAD3-206ENST00000534091 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
LDLRAD3-206ENST00000534091 KIF1AQ12756 1690 aa14.03□□□□□ -0.16
LDLRAD3-206ENST00000534091 ARHGEF28Q8N1W1 1705 aaKnown RBP14.02□□□□□ -0.16
LDLRAD3-206ENST00000534091 ANKARQ7Z5J8 1434 aa14.02□□□□□ -0.16
LDLRAD3-206ENST00000534091 PLEKHH1Q9ULM0 1364 aa14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 SOCS7O14512 581 aa14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 POGKQ9P215 609 aa14.02□□□□□ -0.17
LDLRAD3-206ENST00000534091 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
LDLRAD3-206ENST00000534091 KIF7Q2M1P5 1343 aa14□□□□□ -0.17
LDLRAD3-206ENST00000534091 ILDR2Q71H61 639 aa14□□□□□ -0.17
LDLRAD3-206ENST00000534091 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
LDLRAD3-206ENST00000534091 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-206ENST00000534091 ESCO1Q5FWF5 840 aa13.99□□□□□ -0.17
LDLRAD3-206ENST00000534091 ORAI2Q96SN7 254 aa13.99□□□□□ -0.17
LDLRAD3-206ENST00000534091 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
LDLRAD3-206ENST00000534091 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
LDLRAD3-206ENST00000534091 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
LDLRAD3-206ENST00000534091 TESK2Q96S53 571 aa13.98□□□□□ -0.17
LDLRAD3-206ENST00000534091 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
LDLRAD3-206ENST00000534091 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.17
LDLRAD3-206ENST00000534091 TULP4Q9NRJ4 1543 aa13.96□□□□□ -0.17
LDLRAD3-206ENST00000534091 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-206ENST00000534091 PXDNQ92626 1479 aa13.95□□□□□ -0.18
LDLRAD3-206ENST00000534091 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
LDLRAD3-206ENST00000534091 PSME1Q06323 249 aa13.94□□□□□ -0.18
LDLRAD3-206ENST00000534091 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
LDLRAD3-206ENST00000534091 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-206ENST00000534091 ITSN1Q15811 1721 aa13.93□□□□□ -0.18
LDLRAD3-206ENST00000534091 FOXO3O43524 673 aa13.93□□□□□ -0.18
LDLRAD3-206ENST00000534091 TMF1P82094 1093 aa13.93□□□□□ -0.18
LDLRAD3-206ENST00000534091 ZNF772Q68DY9 489 aaPredicted RBP13.93□□□□□ -0.18
LDLRAD3-206ENST00000534091 LRP6O75581 1613 aa13.93□□□□□ -0.18
LDLRAD3-206ENST00000534091 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
LDLRAD3-206ENST00000534091 MEX3CQ5U5Q3 659 aaKnown RBP13.92□□□□□ -0.18
LDLRAD3-206ENST00000534091 USP32Q8NFA0 1604 aa13.92□□□□□ -0.18
LDLRAD3-206ENST00000534091 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
LDLRAD3-206ENST00000534091 MYOM1P52179 1685 aa13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 MIER1Q8N108 512 aa13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
LDLRAD3-206ENST00000534091 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
LDLRAD3-206ENST00000534091 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.19
LDLRAD3-206ENST00000534091 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
LDLRAD3-206ENST00000534091 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
LDLRAD3-206ENST00000534091 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
LDLRAD3-206ENST00000534091 TNS3Q68CZ2 1445 aa13.88□□□□□ -0.19
LDLRAD3-206ENST00000534091 ATP7BP35670 1465 aa13.87□□□□□ -0.19
LDLRAD3-206ENST00000534091 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
LDLRAD3-206ENST00000534091 BRD4O60885 1362 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 NUTM2BA6NNL0 878 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 NUTM2EB1AL46 878 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 ANP32CO43423 234 aa13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 NUTM2AQ8IVF1 878 aaPredicted RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
LDLRAD3-206ENST00000534091 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
LDLRAD3-206ENST00000534091 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD3-206ENST00000534091 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms