RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 DEKP35659 375 aaKnown RBP7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 ANKLE2Q86XL3 938 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 EXOC6Q8TAG9 804 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 TSR1Q2NL82 804 aaKnown RBP7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 PLEKHO1Q53GL0 409 aaPredicted RBP7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 A0A0U1RQG5 324 aaPredicted RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 DDX54Q8TDD1 881 aaKnown RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 CCDC43Q96MW1 224 aaKnown RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 ERC2O15083 957 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 WASHC4Q2M389 1173 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 PRAM1Q96QH2 718 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 TPM2P07951 284 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 TATP17735 454 aaPredicted RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 GAS2L2Q8NHY3 880 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 SLC26A8Q96RN1 970 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 KRI1Q8N9T8 703 aaKnown RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 RRBP1Q9P2E9 1410 aaKnown RBP7.79□□□□□ -1.16
UBQLN1-206ENST00000533705 FYCO1Q9BQS8 1478 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 KIF6Q6ZMV9 814 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 CCDC47Q96A33 483 aaKnown RBP7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 DDX11L8A8MPP1 907 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 BECN2A8MW95 431 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 MTMR7Q9Y216 660 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 GOLGA6L19H0YKK7 550 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 MTHFSP49914 203 aa7.78□□□□□ -1.16
UBQLN1-206ENST00000533705 IKQ13123 557 aaPredicted RBP7.77□□□□□ -1.16
UBQLN1-206ENST00000533705 NCOA2Q15596 1464 aa7.77□□□□□ -1.16
UBQLN1-206ENST00000533705 CASKIN1Q8WXD9 1431 aa7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 TPM1P09493 284 aa7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 PRDM11Q9NQV5 511 aa7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 RALYLQ86SE5 291 aaKnown RBP7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 KIF7Q2M1P5 1343 aa7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 CCAR1Q8IX12 1150 aaKnown RBP7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 DDX49Q9Y6V7 483 aaKnown RBP7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 PDE4AP27815 886 aa7.77□□□□□ -1.17
UBQLN1-206ENST00000533705 SCAPERQ9BY12 1400 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 SLC52A1Q9NWF4 448 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 SMG6Q86US8 1419 aaKnown RBP7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 CCDC30Q5VVM6 783 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 CCDC7Q96M83 1385 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 LRRC9Q6ZRR7 1453 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 MRC2Q9UBG0 1479 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 CABP4P57796 275 aa7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 PCMTD1Q96MG8 357 aaPredicted RBP7.76□□□□□ -1.17
UBQLN1-206ENST00000533705 SLC4A3P48751 1232 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 XPCQ01831 940 aaPredicted RBP7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 SAFBQ15424 915 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 GOLGA6L1Q8N7Z2 621 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 PRKAR2BP31323 418 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 ZNF692Q9BU19 519 aaPredicted RBP7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 CDK19Q9BWU1 502 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 LNPKQ9C0E8 428 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 POGZQ7Z3K3 1410 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 GNAI3P08754 354 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 ANKRD20A12PQ8NF67 263 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 TBC1D2BQ9UPU7 963 aa7.75□□□□□ -1.17
UBQLN1-206ENST00000533705 FOSBP53539 338 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 PLEKHH2Q8IVE3 1493 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 CABP1Q9NZU7 370 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 HOOK1Q9UJC3 728 aaKnown RBP7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 CLASRPQ8N2M8 674 aaKnown RBP7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 TCP11L2Q8N4U5 519 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 SKOR2Q2VWA4 1001 aaPredicted RBP7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 CNNM1Q9NRU3 951 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 BICD2Q8TD16 824 aa7.74□□□□□ -1.17
UBQLN1-206ENST00000533705 HFM1A2PYH4 1435 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 VPS37CA5D8V6 355 aaPredicted RBP7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 IPO7O95373 1038 aaKnown RBP7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 ZNF530Q6P9A1 599 aaPredicted RBP7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 SPG7Q9UQ90 795 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 SMC3Q9UQE7 1217 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 SURF6O75683 361 aaKnown RBP7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 AAMPQ13685 434 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 R3HCC1Q9Y3T6 440 aaKnown RBP7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 NESP48681 1621 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 SULT6B1Q6IMI4 303 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 ZNF428Q96B54 188 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 ARID3AQ99856 593 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 FSD1Q9BTV5 496 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 ADAMTS8Q9UP79 889 aa7.73□□□□□ -1.17
UBQLN1-206ENST00000533705 ZC3H6P61129 1189 aaKnown RBP7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 DNAJC2Q99543 621 aaKnown RBP7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 SLC12A5Q9H2X9 1139 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 KDM4AO75164 1064 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 PANK1Q8TE04 598 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 NINLQ9Y2I6 1382 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 C9orf84Q5VXU9 1444 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 KIF21BO75037 1637 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 CNTLNQ9NXG0 1405 aa7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 SART3Q15020 963 aaKnown RBP7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 GNL3LQ9NVN8 582 aaKnown RBP7.72□□□□□ -1.17
UBQLN1-206ENST00000533705 XBP1P17861 261 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms