RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
BEST3-207ENST00000533674 LRP6O75581 1613 aa13.83□□□□□ -0.2
BEST3-207ENST00000533674 AHDC1Q5TGY3 1603 aaPredicted RBP13.83□□□□□ -0.2
BEST3-207ENST00000533674 ADAMTS13Q76LX8 1427 aa13.83□□□□□ -0.2
BEST3-207ENST00000533674 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
BEST3-207ENST00000533674 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
BEST3-207ENST00000533674 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
BEST3-207ENST00000533674 ITGAEP38570 1179 aa13.82□□□□□ -0.2
BEST3-207ENST00000533674 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
BEST3-207ENST00000533674 NUP155O75694 1391 aa13.82□□□□□ -0.2
BEST3-207ENST00000533674 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
BEST3-207ENST00000533674 EVX2Q03828 476 aa13.8□□□□□ -0.2
BEST3-207ENST00000533674 ROCK1Q13464 1354 aa13.8□□□□□ -0.2
BEST3-207ENST00000533674 RXRBP28702 533 aa13.79□□□□□ -0.2
BEST3-207ENST00000533674 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
BEST3-207ENST00000533674 DCCP43146 1447 aa13.78□□□□□ -0.2
BEST3-207ENST00000533674 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
BEST3-207ENST00000533674 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
BEST3-207ENST00000533674 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
BEST3-207ENST00000533674 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
BEST3-207ENST00000533674 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
BEST3-207ENST00000533674 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
BEST3-207ENST00000533674 AFF2P51816 1311 aa13.74□□□□□ -0.21
BEST3-207ENST00000533674 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
BEST3-207ENST00000533674 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
BEST3-207ENST00000533674 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
BEST3-207ENST00000533674 NRXN3Q9Y4C0 1643 aa13.73□□□□□ -0.21
BEST3-207ENST00000533674 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
BEST3-207ENST00000533674 MST1RQ04912 1400 aa13.73□□□□□ -0.21
BEST3-207ENST00000533674 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
BEST3-207ENST00000533674 CDK12Q9NYV4 1490 aaPredicted RBP13.71□□□□□ -0.21
BEST3-207ENST00000533674 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.22
BEST3-207ENST00000533674 METP08581 1390 aa13.71□□□□□ -0.22
BEST3-207ENST00000533674 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
BEST3-207ENST00000533674 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
BEST3-207ENST00000533674 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
BEST3-207ENST00000533674 KIF1BO60333 1816 aa13.69□□□□□ -0.22
BEST3-207ENST00000533674 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
BEST3-207ENST00000533674 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
BEST3-207ENST00000533674 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
BEST3-207ENST00000533674 PNPLA6Q8IY17 1366 aa13.68□□□□□ -0.22
BEST3-207ENST00000533674 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
BEST3-207ENST00000533674 RBM6P78332 1123 aaKnown RBP13.67□□□□□ -0.22
BEST3-207ENST00000533674 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
BEST3-207ENST00000533674 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
BEST3-207ENST00000533674 MIER1Q8N108 512 aa13.66□□□□□ -0.22
BEST3-207ENST00000533674 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
BEST3-207ENST00000533674 RGS12O14924 1447 aa13.65□□□□□ -0.22
BEST3-207ENST00000533674 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
BEST3-207ENST00000533674 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
BEST3-207ENST00000533674 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
BEST3-207ENST00000533674 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
BEST3-207ENST00000533674 USP21Q9UK80 565 aa13.62□□□□□ -0.23
BEST3-207ENST00000533674 ATAD2Q6PL18 1390 aa13.61□□□□□ -0.23
BEST3-207ENST00000533674 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
BEST3-207ENST00000533674 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
BEST3-207ENST00000533674 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
BEST3-207ENST00000533674 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
BEST3-207ENST00000533674 LAMC1P11047 1609 aa13.59□□□□□ -0.23
BEST3-207ENST00000533674 HFM1A2PYH4 1435 aa13.58□□□□□ -0.24
BEST3-207ENST00000533674 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
BEST3-207ENST00000533674 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
BEST3-207ENST00000533674 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
BEST3-207ENST00000533674 NPHP3Q7Z494 1330 aa13.57□□□□□ -0.24
BEST3-207ENST00000533674 NAIPQ13075 1403 aa13.56□□□□□ -0.24
BEST3-207ENST00000533674 PPLO60437 1756 aa13.56□□□□□ -0.24
BEST3-207ENST00000533674 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
BEST3-207ENST00000533674 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
BEST3-207ENST00000533674 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
BEST3-207ENST00000533674 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
BEST3-207ENST00000533674 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
BEST3-207ENST00000533674 GABBR2O75899 941 aa13.53□□□□□ -0.24
BEST3-207ENST00000533674 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
BEST3-207ENST00000533674 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
BEST3-207ENST00000533674 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
BEST3-207ENST00000533674 RRBP1Q9P2E9 1410 aaKnown RBP13.53□□□□□ -0.24
BEST3-207ENST00000533674 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
BEST3-207ENST00000533674 STK26Q9P289 416 aa13.52□□□□□ -0.25
BEST3-207ENST00000533674 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
BEST3-207ENST00000533674 ATRNO75882 1429 aa13.52□□□□□ -0.25
BEST3-207ENST00000533674 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
BEST3-207ENST00000533674 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
BEST3-207ENST00000533674 FOXO3O43524 673 aa13.51□□□□□ -0.25
BEST3-207ENST00000533674 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
BEST3-207ENST00000533674 MYOM2P54296 1465 aa13.5□□□□□ -0.25
BEST3-207ENST00000533674 CCDC144AA2RUR9 1427 aa13.5□□□□□ -0.25
BEST3-207ENST00000533674 PXDNQ92626 1479 aa13.49□□□□□ -0.25
BEST3-207ENST00000533674 CLCN6P51797 869 aa13.49□□□□□ -0.25
BEST3-207ENST00000533674 RGL3Q3MIN7 710 aa13.49□□□□□ -0.25
BEST3-207ENST00000533674 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
BEST3-207ENST00000533674 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
BEST3-207ENST00000533674 GJD4Q96KN9 370 aaPredicted RBP13.48□□□□□ -0.25
BEST3-207ENST00000533674 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
BEST3-207ENST00000533674 WAPLQ7Z5K2 1190 aa13.47□□□□□ -0.25
BEST3-207ENST00000533674 BCL9LQ86UU0 1499 aa13.47□□□□□ -0.25
BEST3-207ENST00000533674 ADGRF5Q8IZF2 1346 aa13.46□□□□□ -0.25
BEST3-207ENST00000533674 SF3B2Q13435 895 aaKnown RBP13.46□□□□□ -0.25
BEST3-207ENST00000533674 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
BEST3-207ENST00000533674 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
BEST3-207ENST00000533674 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms