RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAPPC4-214ENST00000533632 SIRT1Q96EB6 747 aa18.91■□□□□ 0.62
TRAPPC4-214ENST00000533632 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
TRAPPC4-214ENST00000533632 FBXO41Q8TF61 875 aa18.91■□□□□ 0.62
TRAPPC4-214ENST00000533632 MSH6P52701 1360 aa18.9■□□□□ 0.62
TRAPPC4-214ENST00000533632 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
TRAPPC4-214ENST00000533632 C19orf44Q9H6X5 657 aa18.88■□□□□ 0.61
TRAPPC4-214ENST00000533632 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
TRAPPC4-214ENST00000533632 DCCP43146 1447 aa18.88■□□□□ 0.61
TRAPPC4-214ENST00000533632 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
TRAPPC4-214ENST00000533632 CDC42BPGQ6DT37 1551 aa18.87■□□□□ 0.61
TRAPPC4-214ENST00000533632 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC4-214ENST00000533632 TESK2Q96S53 571 aa18.86■□□□□ 0.61
TRAPPC4-214ENST00000533632 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRAPPC4-214ENST00000533632 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
TRAPPC4-214ENST00000533632 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
TRAPPC4-214ENST00000533632 TOM1O60784 492 aa18.85■□□□□ 0.61
TRAPPC4-214ENST00000533632 MST1RQ04912 1400 aa18.84■□□□□ 0.61
TRAPPC4-214ENST00000533632 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
TRAPPC4-214ENST00000533632 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
TRAPPC4-214ENST00000533632 ILDR1Q86SU0 546 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC4-214ENST00000533632 POGKQ9P215 609 aa18.82■□□□□ 0.6
TRAPPC4-214ENST00000533632 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
TRAPPC4-214ENST00000533632 CADPS2Q86UW7 1296 aa18.81■□□□□ 0.6
TRAPPC4-214ENST00000533632 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
TRAPPC4-214ENST00000533632 C11orf95C9JLR9 678 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC4-214ENST00000533632 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
TRAPPC4-214ENST00000533632 RGPD8O14715 1765 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC4-214ENST00000533632 ATF3P18847 181 aa18.8■□□□□ 0.6
TRAPPC4-214ENST00000533632 PIP4K2BP78356 416 aa18.8■□□□□ 0.6
TRAPPC4-214ENST00000533632 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
TRAPPC4-214ENST00000533632 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-214ENST00000533632 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
TRAPPC4-214ENST00000533632 C1orf167Q5SNV9 1468 aa18.78■□□□□ 0.6
TRAPPC4-214ENST00000533632 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-214ENST00000533632 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
TRAPPC4-214ENST00000533632 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
TRAPPC4-214ENST00000533632 BRINP3Q76B58 766 aa18.73■□□□□ 0.59
TRAPPC4-214ENST00000533632 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
TRAPPC4-214ENST00000533632 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
TRAPPC4-214ENST00000533632 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
TRAPPC4-214ENST00000533632 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-214ENST00000533632 TMF1P82094 1093 aa18.71■□□□□ 0.59
TRAPPC4-214ENST00000533632 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
TRAPPC4-214ENST00000533632 AHDC1Q5TGY3 1603 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-214ENST00000533632 MYOM1P52179 1685 aa18.71■□□□□ 0.58
TRAPPC4-214ENST00000533632 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
TRAPPC4-214ENST00000533632 CCDC7Q96M83 1385 aa18.7■□□□□ 0.58
TRAPPC4-214ENST00000533632 EVC2Q86UK5 1308 aa18.7■□□□□ 0.58
TRAPPC4-214ENST00000533632 ATP7BP35670 1465 aa18.7■□□□□ 0.58
TRAPPC4-214ENST00000533632 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
TRAPPC4-214ENST00000533632 PHLPP1O60346 1717 aa18.69■□□□□ 0.58
TRAPPC4-214ENST00000533632 HSPA1LP34931 641 aa18.69■□□□□ 0.58
TRAPPC4-214ENST00000533632 COL16A1Q07092 1604 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-214ENST00000533632 ANKARQ7Z5J8 1434 aa18.68■□□□□ 0.58
TRAPPC4-214ENST00000533632 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
TRAPPC4-214ENST00000533632 CABP2Q9NPB3 220 aa18.68■□□□□ 0.58
TRAPPC4-214ENST00000533632 KIF1AQ12756 1690 aa18.67■□□□□ 0.58
TRAPPC4-214ENST00000533632 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
TRAPPC4-214ENST00000533632 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
TRAPPC4-214ENST00000533632 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
TRAPPC4-214ENST00000533632 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
TRAPPC4-214ENST00000533632 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
TRAPPC4-214ENST00000533632 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
TRAPPC4-214ENST00000533632 NUDT16Q96DE0 195 aaKnown RBP18.62■□□□□ 0.57
TRAPPC4-214ENST00000533632 PXDNQ92626 1479 aa18.61■□□□□ 0.57
TRAPPC4-214ENST00000533632 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
TRAPPC4-214ENST00000533632 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
TRAPPC4-214ENST00000533632 ATAD2Q6PL18 1390 aa18.6■□□□□ 0.57
TRAPPC4-214ENST00000533632 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
TRAPPC4-214ENST00000533632 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC4-214ENST00000533632 FOXO3O43524 673 aa18.58■□□□□ 0.57
TRAPPC4-214ENST00000533632 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.56
TRAPPC4-214ENST00000533632 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.56
TRAPPC4-214ENST00000533632 TRPM3Q9HCF6 1732 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-214ENST00000533632 PMFBP1Q8TBY8 1022 aa18.58■□□□□ 0.56
TRAPPC4-214ENST00000533632 SLC12A5Q9H2X9 1139 aa18.58■□□□□ 0.56
TRAPPC4-214ENST00000533632 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
TRAPPC4-214ENST00000533632 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
TRAPPC4-214ENST00000533632 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
TRAPPC4-214ENST00000533632 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
TRAPPC4-214ENST00000533632 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
TRAPPC4-214ENST00000533632 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
TRAPPC4-214ENST00000533632 XPCQ01831 940 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-214ENST00000533632 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
TRAPPC4-214ENST00000533632 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-214ENST00000533632 PLEKHG3A1L390 1219 aa18.54■□□□□ 0.56
TRAPPC4-214ENST00000533632 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
TRAPPC4-214ENST00000533632 ALS2Q96Q42 1657 aa18.52■□□□□ 0.56
TRAPPC4-214ENST00000533632 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
TRAPPC4-214ENST00000533632 A0A1W2PP64 1363 aa18.52■□□□□ 0.55
TRAPPC4-214ENST00000533632 ACEP12821 1306 aa18.51■□□□□ 0.55
TRAPPC4-214ENST00000533632 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
TRAPPC4-214ENST00000533632 COL22A1Q8NFW1 1626 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC4-214ENST00000533632 KRT28Q7Z3Y7 464 aa18.5■□□□□ 0.55
TRAPPC4-214ENST00000533632 PANK3Q9H999 370 aa18.5■□□□□ 0.55
TRAPPC4-214ENST00000533632 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
TRAPPC4-214ENST00000533632 JCADQ9P266 1359 aa18.5■□□□□ 0.55
TRAPPC4-214ENST00000533632 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
TRAPPC4-214ENST00000533632 NRKQ7Z2Y5 1582 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms