RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
CSRP1-218ENST00000533402 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 KTN1Q86UP2 1357 aaKnown RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 CCDC112Q8NEF3 446 aa9.49□□□□□ -0.89
CSRP1-218ENST00000533402 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
CSRP1-218ENST00000533402 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 URB2Q14146 1524 aaKnown RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 AXDND1Q5T1B0 1012 aaPredicted RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 PES1O00541 588 aaKnown RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 IPO7O95373 1038 aaKnown RBP9.49□□□□□ -0.89
CSRP1-218ENST00000533402 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
CSRP1-218ENST00000533402 RRBP1Q9P2E9 1410 aaKnown RBP9.48□□□□□ -0.89
CSRP1-218ENST00000533402 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
CSRP1-218ENST00000533402 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 CEP89Q96ST8 783 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 ADAMTS12P58397 1594 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 HFM1A2PYH4 1435 aa9.48□□□□□ -0.89
CSRP1-218ENST00000533402 POGZQ7Z3K3 1410 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
CSRP1-218ENST00000533402 RALBP1Q15311 655 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 GORABQ5T7V8 394 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 RUSC2Q8N2Y8 1516 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 AMOTL1Q8IY63 956 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
CSRP1-218ENST00000533402 GOLGA6L7A0A1B0GV03 622 aa9.46□□□□□ -0.89
CSRP1-218ENST00000533402 SASS6Q6UVJ0 657 aa9.46□□□□□ -0.89
CSRP1-218ENST00000533402 TCEAL9Q9UHQ7 104 aa9.46□□□□□ -0.89
CSRP1-218ENST00000533402 RGL3Q3MIN7 710 aa9.46□□□□□ -0.89
CSRP1-218ENST00000533402 ROCK1Q13464 1354 aa9.46□□□□□ -0.89
CSRP1-218ENST00000533402 CT47B1P0C2W7 299 aaPredicted RBP9.46□□□□□ -0.9
CSRP1-218ENST00000533402 GPATCH3Q96I76 525 aa9.46□□□□□ -0.9
CSRP1-218ENST00000533402 CHMP3Q9Y3E7 222 aa9.46□□□□□ -0.9
CSRP1-218ENST00000533402 H3BQV1 296 aa9.46□□□□□ -0.9
CSRP1-218ENST00000533402 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
CSRP1-218ENST00000533402 NOL10Q9BSC4 688 aaKnown RBP9.46□□□□□ -0.9
CSRP1-218ENST00000533402 EPRSP07814 1512 aaKnown RBP9.46□□□□□ -0.9
CSRP1-218ENST00000533402 EIF3JO75822 258 aaKnown RBP9.46□□□□□ -0.9
CSRP1-218ENST00000533402 PLIN1O60240 522 aa9.46□□□□□ -0.9
CSRP1-218ENST00000533402 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
CSRP1-218ENST00000533402 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
CSRP1-218ENST00000533402 SSR1P43307 286 aaKnown RBP9.45□□□□□ -0.9
CSRP1-218ENST00000533402 MPHOSPH9Q99550 1183 aa9.45□□□□□ -0.9
CSRP1-218ENST00000533402 TSPY26PQ9H489 355 aa9.45□□□□□ -0.9
CSRP1-218ENST00000533402 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
CSRP1-218ENST00000533402 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
CSRP1-218ENST00000533402 CENPJQ9HC77 1338 aaPredicted RBP9.45□□□□□ -0.9
CSRP1-218ENST00000533402 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 UGGT2Q9NYU1 1516 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 EVA1CP58658 441 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 PKD2Q13563 968 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 ARAP1Q96P48 1450 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 TRIM5Q9C035 493 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 CFAP74Q9C0B2 1584 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 WASHC2CQ9Y4E1 1318 aa9.44□□□□□ -0.9
CSRP1-218ENST00000533402 CCP110O43303 1012 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 ZRSR2Q15696 482 aaKnown RBP9.43□□□□□ -0.9
CSRP1-218ENST00000533402 KIF15Q9NS87 1388 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 DDX11Q96FC9 970 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 C22orf23Q9BZE7 217 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 AKNAQ7Z591 1439 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 MBD3O95983 291 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 CCDC141Q6ZP82 1450 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 SMC4Q9NTJ3 1288 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
CSRP1-218ENST00000533402 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
CSRP1-218ENST00000533402 BICD2Q8TD16 824 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 ABCA5Q8WWZ7 1642 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 TICAM2Q86XR7 235 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 RASSF8Q8NHQ8 419 aa9.43□□□□□ -0.9
CSRP1-218ENST00000533402 PCF11O94913 1555 aaKnown RBP9.43□□□□□ -0.9
CSRP1-218ENST00000533402 PLB1Q6P1J6 1458 aa9.42□□□□□ -0.9
CSRP1-218ENST00000533402 CT47A1Q5JQC4 288 aaPredicted RBP9.42□□□□□ -0.9
CSRP1-218ENST00000533402 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
CSRP1-218ENST00000533402 TDO2P48775 406 aa9.42□□□□□ -0.9
CSRP1-218ENST00000533402 TTLL5Q6EMB2 1281 aa9.42□□□□□ -0.9
CSRP1-218ENST00000533402 GTPBP4Q9BZE4 634 aaKnown RBP9.42□□□□□ -0.9
CSRP1-218ENST00000533402 ZNF330Q9Y3S2 320 aaPredicted RBP9.41□□□□□ -0.9
CSRP1-218ENST00000533402 LRRFIP1Q32MZ4 808 aaKnown RBP9.41□□□□□ -0.9
CSRP1-218ENST00000533402 CAGE1Q8TC20 777 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 TERF2IPQ9NYB0 399 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 TEX14Q8IWB6 1497 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 ERLIN1O75477 346 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 WDHD1O75717 1129 aaPredicted RBP9.41□□□□□ -0.9
CSRP1-218ENST00000533402 ANKRD50Q9ULJ7 1429 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
CSRP1-218ENST00000533402 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
CSRP1-218ENST00000533402 NBPF1Q3BBV0 1214 aa9.41□□□□□ -0.9
CSRP1-218ENST00000533402 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms